Experiment one -v2
Collection
3 items
•
Updated
index
int64 0
210k
| seq_len
int64 1k
1.57M
| id
int64 1
1.83M
| name
stringlengths 8
11
| host
stringlengths 0
64
| species
stringlengths 7
95
| organism_name
stringlengths 0
88
| location_in_host
stringclasses 150
values | family
stringclasses 246
values | genus
stringlengths 7
26
| molecule_type
stringclasses 15
values | decribtion_full
stringlengths 175
3.54k
| chunked_seqs
stringlengths 1k
2.05k
| relative_position
int64 0
943
| number_of_chunks
int64 1
955
| percentage_position
float64 0
1
| sequence_quality
float64 0
0
| __index_level_0__
int64 1
1.83M
| input_ids
sequencelengths 2.05k
2.05k
| attention_mask
sequencelengths 2.05k
2.05k
|
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0
| 7,462
| 1
|
AB769152.1
|
Homo sapiens
|
Coxsackievirus A24
|
Enterovirus C
|
eye
|
Picornaviridae
|
Enterovirus
|
ssRNA(+)
|
AB769152.1 |Coxsackievirus A24 genomic RNA, complete genome, strain: CA24v/Okinawa/5/2011|set:AB769152|Coxsackievirus A24||2012-12-05T00:00:00Z|Department of Biological Sciences; 2085 Ozato, Nanjo, Okinawa 901-1202|Japan|Nidaira,M., Kuba,Y., Saitoh,M., Taira,K., Maeshiro,N., Mahoe,Y., Kyan,H., Takara,T., Okano,S., Kudaka,J., Yoshida,H., Oishi,K., Kimura,H.||Enterovirus C|Enterovirus|complete|Picornaviridae|ssRNA(+)|7462|GenBank|||1|Japan:Okinawa Island|Japan||Homo sapiens|eye|2011-06||
|
ctaccattgtgcaagctagactatgcaccaaactcatccacggagattcccataacagtgactattgcaccaatgttcacagaattcaatggactcaggaacattaccgtgcccgctactcaaggattgcctacaatgttgaccccagggtcgtcgcaatttctgacatccgatgatttccaatccccttgtgccctccccaactttgatgtgaccccaccaatacacataccaggagaggtgtttaacatgatggagctagctgagattgactcgatgattccgatgaattcagtaactggcaaggctaacacaatggagatgtacccgatcccgctagacgacaaaggtggtgcaacacccatatttagcatttccctcagtccagcctccgataagagactgcagtataccatgttgggggagattcttaactactacacccactggactggttcgttgaggttcacgttcctgttttgtggtagtatgatggctacagggaaaattttacttagctactcaccaccaggagccaaaccacctaccaccagaaaggaagcgatgttgggcacacacataatatgggatcttggacttcagtcctcatgcaccatgctagccccttggatatccaacacagtctacagaaggtgtattaaagatgactttacagaaggaggctacatcacttgcttttaccagacaagaatagtggtgccatctggtacaccaacgtcaatgttcatgttggcctttgtgagtgcttgcccagattttagcgtgcgtctgttgagagacactaatcacatctcacagagaactttgtttgcgcgcgcacaaggcattgaggagaccattgacactgttattaccaatgcattacagctttcacaacctaaaccgcaaaagcagcacactgcacaatccacaccgctcactagtggagtcaactcacaggaggtgcccgcactaactgcagtagagactggtgcatctggccaggcggtgcccagtgatgtaattgagaccagacatgttgtgaattacaagactaggtctgaatcaacactagagtccttctttggaagatctgcttgtgtcaccatactggaagtggagaattttaacgccacgactgacgctgataggaaaaagcagtttaccacatgggctatcacgtacacagacacagtccagctgagaaggaaactggagttttttacctactccagatttgacctagagatgacttttgtcataacggaaaggtactacaccagcaacacaggacatgccaggaatcaagtctaccagcttatgtacataccacctggtgctccgcgacccacggcttgggacgactatacctggcagagttcatcgaacccgtcagtgttttacacgtacggcagtgcaccacccagaatgtctatcccctacgttggcatagcaaacgcgtactcgcacttttacgacgggttcgcgcgtgttcctttgaaggatgagactgttgactctggagacacatattatggactggttaccatcaatgactttgggaccttggcagtgagggtagtgaacgaatacaatcctgcccgcattacatctaagataagagtgtatatgaagcccaagcatgtaaggtgttggtgtcccagaccacctcgtgcagttccgtaccgaggtgagggcgtcgatttcaaacaagactcaattaccccactgacagccgttgaagacattaatacttttggagggtttggacaccaaaatatggcggtgtatgttgcaggttacaagatttgcaattatcacctagccacccctgaagaccacagcaatgccgtggatgtgctatggaacagagacctcataattgtcagcagcagagcgcagggaaccgacacaattgccagatgtagctgtagagcaggagtgtattactgtaagtcaatgaagaaacactacccagtttcagttacagaacccacttttcaatttatggaggctaatgagtactacccagccaggtaccagacaca
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] |
11
| 2,492
| 21
|
NC_007966.1
|
Merremia mosaic virus
|
Merremia mosaic virus
|
Geminiviridae
|
Begomovirus
|
ssDNA(+/-)
|
NC_007966.1 |Merremia mosaic virus DNA B, complete sequence|GCF_000867165.1|Merremia mosaic virus||2006-04-19T00:00:00Z|National Center for Biotechnology Information, NIH|USA|Idris,A.M., Baumann,K., Bird,J., Brown,J.K.||Merremia mosaic virus|Begomovirus|complete|Geminiviridae|ssDNA(+/-)|2492|RefSeq||DNA B||Puerto Rico|USA|PR|||||PRJNA485481
|
accggatggccgcccgccgcgccccccctggccccacatggtgcccaccagctgtgatgcactttgtaaaggtaatacgtggaacgctcgtatgcattcatttgaactaactgttaactttcttctttaatttgaattattgtcgcgctactatgaaaggttgggtcatacttacaatgattaaattgtttaacgtaatgtacgatttggagacgtggaccagttataaccattatacatcgtcaaattagtttgccgtctctttaagatctatatatatatatgcttgaacgtggagttatgtaaacatatattttattaatatctattactagaatatgtattcttttagatatagaccgtatcattttaattatcggaaacgattttacacacgtacgcaagtgtctaaacgggtagccccgtttaaacgagctgatgtgaaatgtcgaacgaggcagacgactatcgttcatgatgagactaagatgtcttcgcagcgcattcatgagaaccaatttggtccagagtttgtgatgacacataactccgccatatccactttcattaattatcctactttgagtaagaccgagcctaacagaagcagatcttacattaagttgaaacgcttgcggtttaagggtactgttaaaattgagcgtgtgtatgcggatatgaacatggatggtttgaaccctaaagttgaaggggtattcactcttgctgttgtagttgaccgaaaacctcatttaaagccatctggatgtctgcatacatttgatgaggtatttggtgcacggattcacagtcatggtacgttagccattactccgtcactgacagatcgttactacattcgccatgtgtttaaacgtgtaatgtctgttgagaaggatactgccatggttgatgtggaaggatcgatgtctctctctaataagcgttttaattgttgggctacgtttaaggatcttgatcatgaatcttgtaagggtgtttatgacaatattagcaaaaacgccttgttaatttattattgttggatgtctgatgtaccatctaaggcatcgtcatttgtatcatttgatttggattatgttggctaaataaaaatatgtaatttctgttttaaataaataactgtgtattgaacaataaattctattttaacgatttcggctgagccggtgtacaattactattaatacactcatggaccgttgatcgtacaagatcatttaattgggccattgacattgttatattggattgggcccttgaagcccctacgattgaagcagaatcacctggatccaacgcactggttcccagacgattgagttgcctgtatgggtgtattgcattttccagttccgaatctgtgtccgtttggcctataccgattgtgcttcttgaggcccatgactcgcctggtaataattctattgggcttggtagcccaattcttgccattgagattgaccggatcatttttctttcccatctcccgtagcccacatgtgagaaatcgacatccttctcggaaaattgcttagacaggatcttcaccgccggagctctgaatgggatatctacagaatgtttcgctgtcgacagttttagtttccctttgaacttggcgaaatgtgttcgttggtgtatgtttgaatcacagactctgtagtatagtttccacgggattgggtctttcagtgagaagaaagacgaggaaaagtaatgaaggtctatgttgcatctgattgggaacgtccatgatgcttgtaatgattcgttatccgtcatccttctgtcgtggatctccacaattacagtacctattgcgtttatcggtacctgttgcctgtattctatgacgcagtgatctattttcatacaactgcgacttaatcttgctgataattgagccgctgctgacggaaagtgcagtattatctcagttaaatcatgagatagctgatattcgtctctgtgagattctatataattaaaggcacttggaggattaaccaattgagcatccatat
| 0
| 2
| 0.5
| 0
| 21
|
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||
13
| 27,410
| 33
|
KF530114.1
|
Homo sapiens
|
Human coronavirus NL63
|
Human coronavirus NL63
|
Coronaviridae
|
Alphacoronavirus
|
ssRNA(+)
|
KF530114.1 |Human coronavirus NL63 strain NL63/human/USA/891-4/1989, complete genome|set:KF530114|Human coronavirus NL63||2013-10-07T00:00:00Z|J. Craig Venter Institute|USA|Town,C.D., Halpin,R.A., Ransier,A., Fedorova,N., Tsitrin,T., Stockwell,T., Amedeo,P., Appalla,L., Bishop,B., Edworthy,P., Gupta,N., Hoover,J., Katzel,D., Schobel,S., Shrivastava,S., Thovarai,V., Wang,S., Talbot,H.K., Wentworth,D.E., Williams,J.V.||Human coronavirus NL63|Alphacoronavirus|complete|Coronaviridae|ssRNA(+)|27410|GenBank||||USA: Nashville, TN|USA|TN|Homo sapiens||1989-01-03||PRJNA260063
|
gaacaaccttttgaagaagttgaacatgtgctctcaattaaacaacctttttctttttcttttagagatgaattgggtgttcgtgttttagatcaatctgataataattgttggattagtaccacacttgtacagttgcaacttacaaagcttttggatgattctattgagatgcaattgtttaaagttggtaaagttgattcaattgtccaaaagtgttatgagttgtctcatttaattagtggttcacttggtgatagtggtaaacttcttagtgaacttcttaaagaaaaatatacatgttctataacttttgagatgtcttgtgattgtggtaaaaagtttgatgagcaggttggttgtttgttttggattatgccttacacaaaactttttcaaaaaggtgagtgttgtatttgtcataaaatgcagacttataagcttgttagtatgaaaggtactggtgtgtttgtacaggatccagcacctattgacattgatgctttccctgtgaaacctatatgttcatctgtatatttaggtgttaagggttctggtcattatcaaacaaatttatacagttttaacaaagctattgatggttttggtgtctttgacattaaaaatagtagtgttaatactgtttgttttgtcgatgttgattttcatagtgtagaagtagaagctggtgaagttaaaccttttgctgtatataaaaatgttaaattttatttaggtgatatttcacaccttgtaaactgtgtttcttttgactttgttgtcaatgctgctaatgagaatcttatgcatggaggcggtgttgcacgtgctattgatattttgactgaaggtcaacttcagtcattatctaaagattacattagtagtaatggtccacttaaggtaggaacaggtgttatgttggagtgtgaaaaattcaatgtatttaatgttgttggtccgcgagctggtaaacatgagcattcattacttgttgaagcttataattctatcttagttgaaaatggtattccacttatgcctcttcttagttgtggtatttttggtgtaaggattgaaaattctcttaaagctttgtttagttgtgacattaataaattattgcaagtttttgtttattcttcaaatgaagaacaagctgttcttaagtttttagatggtttagatttaacaccagtcattgacgatgttgatgttgttaaaccttttagagttgaaggtaatttttcattctttgattgtggtgtcaatgccttggatggtgatatttacttattatttactaactctattttaatgttggataaacaaggacaattattggatacaaaacttaatggtattttgcaacaggcagctcttgattatcttgctacagttaaaactgtaccagctggtaatttggttaaacttgttgttgagagttgtaccatttatatgtgtgttgtaccatcgataaatgatctttcttttgataaaaatcttggtcgttgtgtgcgtaaacttaatagattgaaaacttgtgttattgccaatgttcctgctattgatgttttgaaaaagcttctttcaagtttgactttaactgttaaatttgttgtagagagtaatgttatggatgttaacgactgttttaagaatgataatgtagttttgaaaattactgaagatggtattaatgttaaagatgttgttgttgagtcttctaagtcacttggtaaacaattgggtgttgtgagtgatggtgttgactcttttgaaggtgttttacctattaatactgatactgtcttatctgtagctccagaagttgactgggttgctttttatggttttgaaaaggcagcactttttgcttctttggatgtaaagccatatggttaccctaatgattttgttggtggttttagagttcttgggaccaccgacaataattgttgggttaatgcaacttgtataattttacagtatcttaagcctacttttaaatctaagggtttaaatgttctttggaacaaatttgttac
| 2
| 17
| 0.2
| 0
| 33
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|
13
| 27,410
| 34
|
KF530114.1
|
Homo sapiens
|
Human coronavirus NL63
|
Human coronavirus NL63
|
Coronaviridae
|
Alphacoronavirus
|
ssRNA(+)
|
KF530114.1 |Human coronavirus NL63 strain NL63/human/USA/891-4/1989, complete genome|set:KF530114|Human coronavirus NL63||2013-10-07T00:00:00Z|J. Craig Venter Institute|USA|Town,C.D., Halpin,R.A., Ransier,A., Fedorova,N., Tsitrin,T., Stockwell,T., Amedeo,P., Appalla,L., Bishop,B., Edworthy,P., Gupta,N., Hoover,J., Katzel,D., Schobel,S., Shrivastava,S., Thovarai,V., Wang,S., Talbot,H.K., Wentworth,D.E., Williams,J.V.||Human coronavirus NL63|Alphacoronavirus|complete|Coronaviridae|ssRNA(+)|27410|GenBank||||USA: Nashville, TN|USA|TN|Homo sapiens||1989-01-03||PRJNA260063
|
actgttttaagaatgataatgtagttttgaaaattactgaagatggtattaatgttaaagatgttgttgttgagtcttctaagtcacttggtaaacaattgggtgttgtgagtgatggtgttgactcttttgaaggtgttttacctattaatactgatactgtcttatctgtagctccagaagttgactgggttgctttttatggttttgaaaaggcagcactttttgcttctttggatgtaaagccatatggttaccctaatgattttgttggtggttttagagttcttgggaccaccgacaataattgttgggttaatgcaacttgtataattttacagtatcttaagcctacttttaaatctaagggtttaaatgttctttggaacaaatttgttacaggtgatgttggaccttttgttagttttatttattttataactatgtcttcaaagggtcaaaagggtgatgctgaagaggcattatctaaattgtcagagtatttgattagtgattctattgttactcttgaacaatattcaacttgtgacatttgtaaaagtactgtagttgaagttaaaagtgctgttgtctgtgctagtgtgcttaaagatggttgtgatgttggtttttgtccacacagacataaattgcgttcacgtgttaagtttgttaatggacgtgttgttattaccaatgttggtgaacctataatttcacaaccttctaagttgcttaatggtattgcttatacaacattttcaggttcttttgataacggtcactatgtagtttatgatgctgctaataatgctgtctatgatggtgctcgtttatttgcttcagatttgtctactttagctgttacagctattgttgtagtaggtggttgtgtaacatctaatgtttcaccaattgttagtgagaaaatttctgttatggataaacttgatactggtgcacaaaaatttttccagtttggtgattttgttatgaataacattgttctgtttttaacttggttgcttagtatgtttagtcttttacgtacttctattatgaagcatgatattaaagttattgccaaggctcctaaacgtacaggtgttattttgacacgtagttttaagtataacattaaatctgctttgtttgttgtaaaacagaagtggtgtgttattgttactttgtttaagttcttattgttattatatgctatttatgcacttgtttttatgattgtgcaatttagtccttttaatagtcttttatgtggtgacattgtaagtggttatgaaaaatccacttttaataaggatatttattgtggtaattctatggtttgtaagatgtgtttgtttagttatcaagagtttaatgatttggatcatactagtcttgtttggaagcacattcgtgatcctatattaatcagtttacaaccatttgttatacttgttattttgttaatttttggtaatatgtatttgcgttttggacttttatattttgttgcacaatttattagtacttttggttctttcttaggctttcatcagaaacagtggtttttacattttgtgccgttcgatgttttatgtaatgagtttttagctacatttattgtctgcaaaattgttttatttgttagacatattattgttggctgtaataatgctgactgtgtagcttgttctaaaagtgctagacttaaacgtgtaccacttcaaactattattaatggtatgcataaatcattctatgttaatgctaatggtggtacttgtttctgtagtaaacataacttcttttgtgttaattgtgattcttttgggcctggtaatacttttattaatggtgatattgcaagagagcttggtaatgttgttaaaacagctgttcaacccacagctcctgcatatgttattattgataaggtagattttgttaatggattttatcgtctttatagtggtgacactttttggcggtatgactttgacattactgaatctaagtatagttgtaaagaggttctgaagaattgt
| 3
| 17
| 0.2
| 0
| 34
|
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|
13
| 27,410
| 43
|
KF530114.1
|
Homo sapiens
|
Human coronavirus NL63
|
Human coronavirus NL63
|
Coronaviridae
|
Alphacoronavirus
|
ssRNA(+)
|
KF530114.1 |Human coronavirus NL63 strain NL63/human/USA/891-4/1989, complete genome|set:KF530114|Human coronavirus NL63||2013-10-07T00:00:00Z|J. Craig Venter Institute|USA|Town,C.D., Halpin,R.A., Ransier,A., Fedorova,N., Tsitrin,T., Stockwell,T., Amedeo,P., Appalla,L., Bishop,B., Edworthy,P., Gupta,N., Hoover,J., Katzel,D., Schobel,S., Shrivastava,S., Thovarai,V., Wang,S., Talbot,H.K., Wentworth,D.E., Williams,J.V.||Human coronavirus NL63|Alphacoronavirus|complete|Coronaviridae|ssRNA(+)|27410|GenBank||||USA: Nashville, TN|USA|TN|Homo sapiens||1989-01-03||PRJNA260063
|
tgatgcaataatcattgataatgatatcaatgattatgttagtgatgcagattttagcattacaggtgattgtgctactgtttaccttgaagataagtttgacttacttatttctgatatgtatgatggtagaattaaattctgtgatggtgaaaacgtctctaaagatgggttttttacttatcttaatggtgttattagagaaaaattagctattggtggtagtgttgccattaagattacagaatatagttggaataagtatctttatgaattaatacaaaaatttgctttttggactttgttttgcacgtctgttaatacatcctcttcagaagcttttcttattggtattaattatttaggtgactttattcaaggtccttttatagctggtaacactgttcatgctaattatatattttggcgtaattctactattatgtctttgtcatacaattcagttttagatttaagtaagtttgaatgtaaacataaggccactgttgttgttacacttaaagatagtgatgtaaatgatatggttttgagtttgatcaagagtggtaggttgttgttacgcaataatggttgttttggtggttttagtaatcatttagtctcaactaaatgaaacttttcttgattttgcttgttttgcccctggcctcttgcttttccacatgtaatagtaatgctaatatctctatgttacaattaggtgttcctgacaattcttcaactattgttacgggtttattgccaactcattggatttgtgctaatcagagtacatctgtttactcagccaaaggtttcttttatattgatgttggtaatcaccgtagtgcttttgcgctccatactggttattatgatgctaatcagtattatatttatgttactaatgaaataggcttaaatgcttctgttactcttaagatttgtaagtttagaaacactacttttgattttttaagtaatgcttctagttcttttgactgtatagttaatttgttatttacagaacagttaggtgcgcctttgggcataactatatctggtgaaactgtacgtctgcatttatataatgtaactcgtactttttatgtgccagcagcttataaacttactaaacttagtgttaaatgttactttaattattcctgtgtttttagtgttgtcaacgccaccgttactgtcaatgtcaccacacataatggccgtgtagttaactacactgtttgtgatgattgtaatggttatactgataacatattttctgttcaacaggatggccgcattcctaatggtttcccttttaataattggtttttgttaactaatggttccacactagtggatggagtctctagactttatcaaccactccgtttaacttgtttatggcctgtacctggtcttaaatcttcaactggttttgtttattttaatgccactggttctgatgttaattgtaacggctaccaacataattctgttgctgatgttatgcgttacaatcttaacttcagtgctaattctgtggacaatctcaagagtggtgttatagtttttaaaactttacagtacgatgttttgttttattgtagtaattcttcttcaggtgttcttgacaccacaataccttttggcccttcctctcaaccttattactgttttataaacagtactatcaacactactcatgttagcacttttgtgggtattttaccacccactgtgcgtgaaattgttgttgctagaactggtcagttttatattaatggttttaagtatttcgatttgggtttcatagaagctgtcaattttaatgtcacgactgctagtgccacagatttttggacggttgcatttgctacttttgttgatgttttggttaatgttagtgcaactaacattcaaaacttactttattgtgattctccatttgaaaagttgcagtgtgagcacttgcagtttgggttgcaagatggtttttattctgcaaattttcttgatgataatgttttgcctgagacttatgt
| 12
| 17
| 0.8
| 0
| 43
|
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] |
|
16
| 9,041
| 57
|
PP487955.1
|
Macaca mulatta
|
Simian immunodeficiency virus
|
Simian immunodeficiency virus
|
Retroviridae
|
Lentivirus
|
ssRNA-RT
|
PP487955.1 |Simian immunodeficiency virus isolate H36J.PBMC.06MAR19.P4B19.group3, complete genome||Simian immunodeficiency virus||2024-03-22T00:00:00Z|Frederick National Laboratory, AIDS and Cancer Virus Program|USA|Keele,B.F., Immonen,T.T., Fennessey,C.M.|H36J.PBMC.06MAR19.P4B19.group3|Simian immunodeficiency virus|Lentivirus|complete|Retroviridae|ssRNA-RT|9041|GenBank||||USA|USA||Macaca mulatta||||
|
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| 6
| 0.7
| 0
| 57
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|
21
| 38,846
| 66
|
OL964739.1
|
Escherichia
|
Escherichia phage T7
|
Teseptimavirus T7
|
Autographiviridae
|
Teseptimavirus
|
dsDNA
|
OL964739.1 |Mutant Escherichia phage T7 clone T7_5t1, complete genome||Escherichia phage T7||2022-01-31T00:00:00Z|SIAT, iSynBio|China|Yuans,S., Ma,Y.||Teseptimavirus T7|Teseptimavirus|complete|Autographiviridae|dsDNA|38846|GenBank|||||||Escherichia||||
|
tcaagatgctcggtaatggtcacttctcggctgcttatagtcacccgctgctacctaacagagtgattaaggtgggctttaagaaagaggattcaggcgcagcctataccgcattctgccgcatgtatcagggtcgtcctggtatccctaacgtctacgatgtacagcgccacgctggatgctatacggtggtacttgacgcacttaaggattgcgagcgtttcaacaatgatgcccattataaatacgctgagattgcaagcgacatcattgattgcaattcggatgagcatgatgagttaactggatgggatggtgagtttgttgaaacttgtaaactaatccgcaagttctttgagggcatcgcctcattcgacatgcatagcgggaacatcatgttctcaaatggagacgtaccatacatcaccgacccggtatcattctcgcagaagaaagacggtggcgcattcagcatcgaccctgaggaactcatcaaggaagtcgaggaagtcgcacgacagaaagaaattgaccgcgctaaggcccgtaaagaacgtcacgaggggcgcttagaggcacgcagattcaaacgtcgcaaccgcaaggcacgtaaagcacacaaagctaagcgcgaaagaatgcttgctgcgtggcgatgggctgaacgtcaagaacggcgtaaccatgaggtagctgtagatgtactaggaagaaccaataacgctatgctctgggtcaacatgttctctggggactttaaggcgcttgaggaacgaatcgcgctgcactggcgtaatgctgaccggatggctatcgctaatggtcttacgctcaacattgataagcaacttgacgcaatgttaatgggctgatagtcttatcttacaggtcatctgcgggtggcctgaataggtacgatttactaactggaagaggcactaaatgaacacgattaacatcgctaagaacgacttctctgacatcgaactggctgctatcccgttcaacactctggctgaccattacggtgagcgtttagctcgcgaacagttggcccttgagcatgagtcttacgagatgggtgaagcacgcttccgcaagatgtttgagcgtcaacttaaagctggtgaggttgcggataacgctgccgccaagcctctcatcactaccctactccctaagatgattgcacgcatcaacgactggtttgaggaagtgaaagctaagcgcggcaagcgcccgacagccttccagttcctgcaagaaatcaagccggaagccgtagcgtacatcaccattaagaccactctggcttgcctaaccagtgctgacaatacaaccgttcaggctgtagcaagcgcaatcggtcgggccattgaggacgaggctcgcttcggtcgtatccgtgaccttgaagctaagcacttcaagaaaaacgttgaggaacaactcaacaagcgcgtagggcacgtctacaagaaagcatttatgcgagttgtcgaggctgacatgctctctaagggtctactcggtggcgaggcgtggtcttcgtggcataaggaagactctattcatgtaggagtacgctgcatcgagatgctcattgagtcaaccggaatggttagcttacaccgccaaaatgctggcgtagtaggtcaagactctgagactatcgaactcgcacctgaatacgctgaggctatcgcaacccgtgcaggtgcgctggctggcatctctccgatgttccaaccttgcgtagttcctcctaagccgtggactggcattactggtggtggctattgggctaacggtcgtcgtcctctggcgctggtgcgtactcacagtaagaaagcactgatgcgctacgaagacgtttacatgcctgaggtgtacaaagcgattaacattgcgcaaaacaccgcatggaaaatcaacaagaaagtcctagcggtcgccaacgtaatcaccaagtggaagcattgtccggtcgaggacatccctgcgattgagcgtgaagaactcccgatgaaaccggaagacatcgacat
| 1
| 24
| 0.1
| 0
| 66
|
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|
21
| 38,846
| 74
|
OL964739.1
|
Escherichia
|
Escherichia phage T7
|
Teseptimavirus T7
|
Autographiviridae
|
Teseptimavirus
|
dsDNA
|
OL964739.1 |Mutant Escherichia phage T7 clone T7_5t1, complete genome||Escherichia phage T7||2022-01-31T00:00:00Z|SIAT, iSynBio|China|Yuans,S., Ma,Y.||Teseptimavirus T7|Teseptimavirus|complete|Autographiviridae|dsDNA|38846|GenBank|||||||Escherichia||||
|
ggcttcgttatgttgctgaggatggtaagattcatggttctgttaaccctaatggagcagttacgggtcgtgcgacccatgcgttcccaaaccttgcgcaaattccgggtgtacgttctccttatggagagcagtgtcgcgctgcttttggcgctgagcaccatttggatgggataactggtaagccttgggttcaggctggcatcgacgcatccggtcttgagctacgctgcttggctcacttcatggctcgctttgataacggcgagtacgctcacgagattcttaacggcgacatccacactaagaaccagatagctgctgaactacctacccgagataacgctaagacgttcatctatgggttcctctatggtgctggtgatgagaagattggacagattgttggtgctggtaaagagcgcggtaaggaactcaagaagaaattccttgagaacacccccgcgattgcagcactccgcgagtctatccaacagacacttgtcgagtcctctcaatgggtagctggtgagcaacaagtcaagtggaaacgccgctggattaaaggtctggatggtcgtaaggtacacgttcgtagtcctcacgctgccttgaataccctactgcaatctgctggtgctctcatctgcaaactgtggattatcaagaccgaagagatgctcgtagagaaaggcttgaagcatggctgggatggggactttgcgtacatggcatgggtacatgatgaaatccaagtaggctgccgtaccgaagagattgctcaggtggtcattgagaccgcacaagaagcgatgcgctgggttggagaccactggaacttccggtgtcttctggataccgaaggtaagatgggtcctaattgggcgatttgccactgatacaggaggctactccaaaggcataaaactataggagaaattattatggctatgacaaagaaatttaaagtgtccttcgacgttaccgcaaagatgtcgtctgacgttcaggcaatcttagagaaagatatgctgcatctatgtaagcaggtcggctcaggtgcgattgtccccaatggtaaacagaaggaaatgattgtccagttcctgacacacggtatggaaggattgatgacattcgtagtacgtacatcatttcgtgaggccattaaggacatgcacgaagagtatgcagataaggactctttcaaacaatctcctgcaacagtacgggaggtgttctgatgtctgactacctgaaagtgctgcaagcaatcaaaagttgccctaagactttccagtccaactatgtacggaacaatgcgagcctcgtagcggaggccgcttcccgtggtcacatctcgtgcctgactactagtggacgtaacggtggcgcttgggaaatcactgcttccggtactcgctttctgaaacgaatgggaggatgtgtctaatgtctcgtgaccttgtgactattccacgcgatgtgtggaacgatatacagggctacatcgactctctggaacgtgagaacgatagccttaagaatcaactaatggaagctgacgaatacgtagcggaactagaggagaaacttaatggcacttcttgaccttaaacaattctatgagttacgtgaaggctgcgacgacaagggtatccttgtgatggacggcgactggctggtcttccaagctatgagtgctgctgagtttgatgcctcttgggaggaagagatttggcaccgatgctgtgaccacgctaaggcccgtcagattcttgaggattccattaagtcctacgagacccgtaagaaggcttgggcaggtgctccaattgtccttgcgttcaccgatagtgttaactggcgtaaagaactggttgacccgaactataaggctaaccgtaaggccgtgaagaaacctgtagggtactttgagttccttgatgctctctttgagcgcgaagagttctattgcatccgtgagcctatgcttgagggtgatgacgttatgggagttattgcttccaatccgtctgccttcggtg
| 9
| 24
| 0.4
| 0
| 74
|
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|
21
| 38,846
| 78
|
OL964739.1
|
Escherichia
|
Escherichia phage T7
|
Teseptimavirus T7
|
Autographiviridae
|
Teseptimavirus
|
dsDNA
|
OL964739.1 |Mutant Escherichia phage T7 clone T7_5t1, complete genome||Escherichia phage T7||2022-01-31T00:00:00Z|SIAT, iSynBio|China|Yuans,S., Ma,Y.||Teseptimavirus T7|Teseptimavirus|complete|Autographiviridae|dsDNA|38846|GenBank|||||||Escherichia||||
|
gctctggtggagcagtacgtaaacagtgtcattgagtacgctggtggtcgtgaacgttttgatgcactgtataaccaccttgagacgcacaaccctgaggctgcacagtcgctggataatgcgttgaccaatcgtgacttagcgaccgttaaggctatcatcaacttggctggtgagtctcgcgctaaggcgttcggtcgtaagccaactcgtagtgtgactaatcgtgctattccggctaaacctcaggctaccaagcgtgaaggctttgcggaccgtagcgagatgattaaagctatgagtgaccctcggtatcgcacagatgccaactatcgtcgtcaagtcgaacagaaagtaatcgattcgaacttctgatagacttcgaaattaatacgactcactatagggagaccacaacggtttccctctagaaataattttgtttaactttaagaaggagatatacatatggctagcatgactggtggacagcaaatgggtactaaccaaggtaaaggtgtagttgctgctggagataaactggcgttgttcttgaaggtatttggcggtgaagtcctgactgcgttcgctcgtacctccgtgaccacttctcgccacatggtacgttccatctccagcggtaaatccgctcagttccctgttctgggtcgcactcaggcagcgtatctggctccgggcgagaacctcgacgataaacgtaaggacatcaaacacaccgagaaggtaatcaccattgacggtctcctgacggctgacgttctgatttatgatattgaggacgcgatgaaccactacgacgttcgctctgagtatacctctcagttgggtgaatctctggcgatggctgcggatggtgcggttctggctgagattgccggtctgtgtaacgtggaaagcaaatataatgagaacatcgagggcttaggtactgctaccgtaattgagaccactcagaacaaggccgcacttaccgaccaagttgcgctgggtaaggagattattgcggctctgactaaggctcgtgcggctctgaccaagaactatgttccggctgctgaccgtgtgttctactgtgacccagatagctactctgcgattctggcagcactgatgccgaacgcagcaaactacgctgctctgattgaccctgagaagggttctatccgcaacgttatgggctttgaggttgtagaagttccgcacctcaccgctggtggtgctggtaccgctcgtgagggcactactggtcagaagcacgtcttccctgccaataaaggtgagggtaatgtcaaggttgctaaggacaacgttatcggcctgttcatgcaccgctctgcggtaggtactgttaagctgcgtgacttggctctggagcgcgctcgccgtgctaacttccaagcggaccagattatcgctaagtacgcaatgggccacggtggtcttcgcccagaagctgctggtgcagtggttttcaaagtggagtaatgctgggggtggcctcaacggtcgctgctagtcccgaagaggcgagtgttacttcaacagaagaaaccttaacgccagcacaggaggccgcacgcacccgcgctgctaacaaagcccgaaaggaagctgagttggctgctgccaccgctgagcaataactagcataaccccttggggcctctaaacgggtcttgaggggttttttgctgaaaggaggaactatatgcgctcatacgatatgaacgttgagactgccgctgagttatcagctgtgaacgacattctggcgtctatcggtgaacctccggtatcaacgctggaaggtgacgctaacgcagatgcagcgaacgctcggcgtattctcaacaagattaaccgacagattcaatctcgtggatggacgttcaacattgaggaaggcataacgctactacctgatgtttactccaacctgattgtatacagtgacgactatttatccctaatgtctacttccggtcaatccatctacgttaaccgaggtggctatgtgtatgaccgaa
| 13
| 24
| 0.6
| 0
| 78
|
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|
22
| 17,826
| 92
|
MG203878.1
|
Miniopterus griveaudi
|
bat paramyxovirus 17770
|
Jeilongvirus madagascarense
|
spleen, abdominal cavity
|
Paramyxoviridae
|
Jeilongvirus
|
ssRNA(-)
|
MG203878.1 |Bat paramyxovirus 17770 strain Bat-PV-17770, complete genome|set:MG203878|bat paramyxovirus 17770||2019-10-19T00:00:00Z|Universite de La Reunion, UMR PIMIT|France|Pascalis,H., Melade,J., Piorkowski,G., Turpin,M., Temmam,S., Ghawar,W., Goodman,S.M., Mavingui,P., de Lamballerie,X.N., Dellagi,K.||Jeilongvirus madagascarense|Jeilongvirus|complete|Paramyxoviridae|ssRNA(-)|17826|GenBank||||Madagascar|Madagascar||Miniopterus griveaudi|spleen, abdominal cavity|2012-01-01||
|
tgtcattctggctggtgttattgttaacctatcttataatgaattaagcaagaaaattgacaatgaaaatgaacagatatatcttatgatgcaaaaattatacactaagtgcaaggagaatccgatggattttgattggacaacggctatcttccagagaatcgaagaagctgagtataaaatttccgacaagacagcacagaagatcatgcaatcattcgacaagagattcaaacatgcaatcaatgaagggaaaatatctgatgattctctcttcaagttccatgtcaaatttgataaggcagaaggtcttgagattgatgccaaagcttccaataaggatgaaaatggacctcatctacatccagaacccactaagaatgcagtaataagacgaacactctctcctccaaggaagcccactcccacaacaccatggaatggtcctactggaattccaggtgtttggtagcaagattatgaatggaatgtgaataaatttccattctcctaacctattaagaaaaacttaggaagcaagagctaataactctggcattttactcttgtacctgctttgctgcaaacttaaaggatggactattatagagggtcaggggtcagatgatggagagtttttaccacggaagaaaggaggttgcaaaataataggctgtatttttaaaaccttgtatgatttggcattatttgcagtcattattctcatgcttttctggataattgatactaatgatagaatgacaaaagttgagaaaattttaatttaaaataatgaactaatgagtcatattcatgactatatcttgcttgatctgaaacctcgtagcattgttatggacagaatcttgtcctaccagcttcccacagcaattgtcaaagcatttgaggtgtcacatactgacctgagagagacgttggagggtgtagtagtcgatcttgctaagttgactgaagtctacagggcgcttctaggctttgatgaaaattgggatctggaatcaaatgcacagaggctgaagtgttcatggagcccaataacgattgctggagagcgagtccttgggactgaaggactatcagaatatgaattaagggctaatcaatcaattgaacatatcaaatcattgtatggtgattttgacaatgtcaaagcaaatattcagcagctgtttgaccaaatcttgatctattttgctaatgaatcctatatcaatggtacagaaatacgaaatgattattattacaatatgactatgaagaatctaactcatatattcgaagatcatgaatcaaaaactgtggtaaaatttatgaatttgatcaaaagaaatgttaagtacaaaaacaaaataattgatcaaatggtccaaaaggcaatccagcataatgtgtccaaaaaatctaataaaagccattcaagaaacaataagaaaaaaagacaatcaaagggaagaaagaacagaaccccaagatcatcactcgagcttcaagaggatataaatcacgggaagagatcttccggaattgtggaatctcctgatatgcgtgcagcgaatccgactctcaaaaaatctaaccaacattttcgaagtgattcatcggaggtcctttactcgcaagcattaaccagagaagctcaagatatgcctgctaaaaaattaaaactcagttggaaggacatcaaggacctaacaaatgagaattcattgatgtttcgaccaatcaagcccaggtttgacccattgtacacccatccagacctaaatcaaactgtggtccttgagcggctcaagataattcatagactcctgtcactcaacacaactaacttgcatgataaatcattttatgacatcttgctgcaagagagaccgaggacgatcaaagacaaggtcaaaaagaaattgggtagaatgaaaagatttacattcattccgaatttagctgcatatcggcttcctttgtacgatcaccagtcatcaaagaagaagattgatcaagcatctacatctaaaacaaagttgtct
| 4
| 11
| 0.5
| 0
| 92
|
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] |
23
| 1,821
| 99
|
MT831939.1
|
Anatidae
|
Goose circovirus
|
Circovirus goose
|
Circoviridae
|
Circovirus
|
ssDNA(+/-)
|
MT831939.1 |Goose circovirus strain GoCV/290/GD/2020, complete genome||Goose circovirus||2021-08-15T00:00:00Z|Foshan University, College of Life Science and Engineering|China|Wang,H., Hu,C.P., Wang,J.H., Zhu,W.J., Chen,J.D., Zhang,J.P.||Circovirus goose|Circovirus|complete|Circoviridae|ssDNA(+/-)|1821|GenBank||||China|China||Anatidae||2020-04||
|
accggcgcctgtactccgtactccgcgctctacggggaagccgctcgccgcactcaagcagaagcctgactatggcgaaaagcagcaactacgcttacaagaggtgggtcttcacgattaataaccctacctttgaagattattgtgcggttgtcgagttctgcaatctggataactgcaagttcgcgattgttggcgaagaaaaaggggagagagaagggacacctcacctgcagggattcctgagtctgcgaaagaatgcgaaagctgctgcgcttgaagagaagctgggaggaagagcctggctgtctcgagctcggggatctgacgaagataacgaagaatattgttccaaagagtcgacataccttcgagtcggtgaaccaaaccgaaaaggtcgctccagtgatctctccgacgcggcatccgacgtgctcgcaggtctgccgataactgacgtggcccggaagtacccgacgacttatgtaatgtttgggcggggcttagagcgattgcgtcagctgatcgttgagaccgctcgtgattggaagacggaggtcatcgttctgattggtcggcctggaagcgggaagagccgttacgcgttcgaatttcccgcccgtgaaaagtattataaatctcgcgggaagtggtgggatggctataatgggcaggatgtggttgtgatggatgatttttatgggtggctcccttacgatgaccttttaaggatctgtgatcgctatcctttaagggttgagtacaagggtggtatgacccagttcgtatctaagacccttataattacgtctaatagggagcctcgtgattggtataaatgcgagtgtgacgtttccgcattgtatcggagaattaatcagtacctgatattaaccccggacggatacgcgcccgcccccgattttatgctgccgttcccaataaactactagagtcctggttaaggttagattaaggaacgtttattgtgtaaaattacaataaagttatggtgcaagcccagtccattgtccgaatcttatgtaataggtaatggttgcctctactgtcagaggtgctgcggtgtcctcggcttgtcttagtgacatacccattccgtagaataccacgttgtcttgaatcgagtttagccatagttgtcttcctcctggtgtgtaccaggtgctccatatgttactccctgtccccccctgctggatggttggtttcgggataaatacccttttatggtatctgtggggtgaccatgtcttcctggagctcattgctgcgtatgggtctacgttccattctgagccgctggttgtagttgtgatgttgccttctttgtctatgtatgtgctgccttgtgtgcgtactcgtgtgaaggggttaaatgccggacggagttcgacctttaccaatcttatcatatagtaatcgaatggataatggtattggttacccgttcccggcaatctgtctccgaagactgcgaagcgtaggttaattcctggtttggggctggttcctgatgattgtatcgcttccaggctcattgcctgccatttgtttttgtctgggcttccggttccgaagaatgtgaaggagatgttctgtgtttgtttgacgttgaagatggtgtaccttgaccttattcgtccgatgtgtagccttcgtcgtctgtatcgtcgtctccggttggttgcccgcctacgacgataatatagactccgcggtctcgcgcgatacatcggcatgatgggcagtggcttcctgtgggcggggacagaaaccgttacaggcgccgtatatattatt
| 0
| 2
| 0.5
| 0
| 99
|
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|
26
| 3,929
| 104
|
NC_015227.2
|
Lespedeza procumbens
|
Trailing lespedeza virus 1
|
Tralespevirus lespedezae
|
plant leaf
|
Tombusviridae
|
Tralespevirus
|
ssRNA(+)
|
NC_015227.2 |Trailing lespedeza virus 1 isolate 06TGP01091, complete genome|GCF_000892335.1|Trailing lespedeza virus 1||2011-03-21T00:00:00Z|National Center for Biotechnology Information, NIH|USA|Adams,M.J., Lefkowitz,E.J., King,A.M., Bamford,D.H., Breitbart,M., Davison,A.J., Ghabrial,S.A., Gorbalenya,A.E., Knowles,N.J., Krell,P., Lavigne,R., Prangishvili,D., Sanfacon,H., Siddell,S.G., Simmonds,P., Carstens,E.B., Scheets,K., Blinkova,O., Melcher,U., Palmer,M.W., Wiley,G.B., Ding,T., Roe,B.A.|06TGP01091|Tralespevirus lespedezae|Tralespevirus|complete|Tombusviridae|ssRNA(+)|3929|RefSeq|||2|USA: Tallgrass Prairie Preserve, Oklahoma|USA|OK|Lespedeza procumbens|plant leaf|2006-06-03||PRJNA485481
|
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] |
27
| 13,286
| 107
|
MN306028.1
|
Homo sapiens
|
Human metapneumovirus
|
Metapneumovirus hominis
|
Pneumoviridae
|
Metapneumovirus
|
ssRNA(-)
|
MN306028.1 |Human metapneumovirus strain HMPV/Seattle/USA/SC0380/2019, complete genome|set:MN306028|Human metapneumovirus|SRR17439936|2019-08-25T00:00:00Z|UW Virology, Laboratory Medicine|USA|Lin,M.J., Tait,A., Greninger,A.L.||Metapneumovirus hominis|Metapneumovirus|complete|Pneumoviridae|ssRNA(-)|13286|GenBank||||USA|USA||Homo sapiens||2019|SAMN24619044|PRJNA338014
|
tggagaaagatgctctagacttgctttcagacaatgaagaggaagatgcagaatcttcaatcttaaccttcgaagaaagagatacctcatcattaagcattgaggccagactagaatcgattgaggagaaattaagcatgatactagggctattaagaacactcaacattgccacagcaggacccacagcagcaagagatgggatcagagatgcaatgattggcataagggaagaactaatagcagacataataaaagaagccaggggaaaagcagcagaaatgatggaagaggaaatgaaccaacggacaaaaataggaaatggtagtgttaaattaactgaaaaggcaaaggagctcaacaaaattgttgaagatgaaagcacaagtggagaatctgaagaagaagaagaaccaaaagacctacaggacaataatcaggaagatgacatttaccagttaattatgtagtttaataaaaataaacaatgggacaagtaaaaatggagtcctatctggtagacacctatcagggcatcccttacacagcagctgttcaagttgatctagtagaaaaagacctgttacctgcaagcctaacaatatggtttcctttgtttcaggccaatacaccaccagcagttctgcttgatcagctaaagactctgacaataactactctgtatgctgcatcacaaagtggtccaatactaaaggtgaatgcatcagcccaaggtgcagcaatgtctgtacttcccaaaaggtttgaagtcaatgcgactgtagcacttgacgaatatagtaaattagaatttgacaaactcacagtctgtgaggtaaaaacagtttacttaacaactatgaaaccatatgggatggtatcaaaatttgtgagctcagccaaatcagttggcaaaaaaacacatgatctaattgcattatgtgattttatggatctagaaaagaacacaccagttacaataccagcatttatcaaatcagtttctatcaaagagagtgaatcagccactgttgaagctgcaataagcagtgaagcagaccaagctctaacacaagccaaaattgcaccttatgcggggctgatcatgattatgaccatgaacaatcccaaaggcatattcaagaagcttggagctgggacacaagttatagtggaactaggagcatatgtccaggctgaaagcataagtaaaatatgcaagacttggagccatcaagggacaagatatgtgctgaagtccagataacaaccaagcaacctgaccaagaactatcaactctattctatagactaaaaagttgctgttttagttatataaaaatcaagttagagtaagaattaaatcaatcaagagtgggacaaataaaaatgtcttggaaagtggtgattattttttcattgctaataacacctcaacacggtcttaaagagagctacttagaagaatcatgtagcactataactgagggttatctcagtgttctgaggacaggttggtataccaacgtttttacattagaggtgggtgatgtagaaaacctcacatgtgctgatggacctagcctaataaaaacagaattagatctgaccaaaagtgcactaagagagctcaaaacagtttctgctgaccagttggcaagagaggaacaaattgaaaatcccagacaatctagatttgttctaggagcaatagcactcggtgttgcaacagcagctgcagttacggcaggtgttgcaattgcaaaaaccatccggcttgagagtgaagttacagcaattaagaatgcccttaaaaagaccaatgaagcagtgtctacattggggaatggggttcgagtgttagcgaccgcagtgagagaactgaaagattttgtgagcaagaatttaactcgtgcaatcaacaagaacaagtgcgacattgatgacctaaaaatggccgttagtttcagtcaattcaacagaaggtttctaaatgttgtgcggcaattttcagacaatgctgggataacaccagcaatatctttaga
| 1
| 9
| 0.2
| 0
| 107
|
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] |
|
28
| 2,912
| 114
|
MN771493.1
|
Homo sapiens
|
TTV-like mini virus
|
TTV-like mini virus
|
Anelloviridae
|
Betatorquevirus
|
ssDNA(-)
|
MN771493.1 |MAG: TTV-like mini virus isolate SAfiA-697-2, complete genome||TTV-like mini virus||2021-12-19T00:00:00Z|University Hospitals of Geneva, Laboratory of Virology|Switzerland|Cordey,S., Laubscher,F., Hartley,M.A., Junier,T., Keitel,K., Docquier,M., Guex,N., Iseli,C., Vieille,G., Le Mercier,P., Gleizes,A., Samaka,J., Mlaganile,T., Kagoro,F., Masimba,J., Said,Z., Temba,H., Elbanna,G.H., Tapparel,C., Zanella,M.C., Xenarios,I., Fellay,J., D'Acremont,V., Kaiser,L., Hartley,M.-A., Zanella,M.-C.|SAfiA-697-2|TTV-like mini virus|Betatorquevirus|complete|Anelloviridae|ssDNA(-)|2912|GenBank|||1|Tanzania|Tanzania||Homo sapiens||2015||
|
aaaaaccacaaaatttacattgccgaccacaaacgaacagcaaaaccacatattttgcattgccgaccacaaacgaacaggaaaaccacaaaatttgcattgccgaccacaaaccgttctatgctaattaacttcttctttttttcctttacttccctaaaaattaattattaatcagcgtcatagaggcgtgtcctctttgctatatattcaatagtaggtccgaatggcagagtttatgccgccagacggagacgggagcacttcagtgactccaggctgatcttgggcgggtgccgaaggtgagtgaaaccaccgtagtcaaggggcaattcgggctagatcagtcttggcggaacgggcaagaaacttaaattattttattttacagatgaacagagttgttccagtaaaatacaaccaaaaagaaaaatgcattcactgggttaatggaattgtacacatccatgactacaactgcggatgcagagatccacttgaatgctcaattctccaaattttcaaacaagaaaaacacctaagatttactacagaagaaaagaattttattaaacaatgccttggggaagatactaccgctactacccaagaagaagacgtgcttggagaagacgttttagaaagcctatttacaacagattttggagaagaaaacgacaccaaagaaaacgtcgctgggtaagaaaaagacttaaattaccttacctaagactaaaagaatacaaccctccacatataagaaaactaaagattaaatttacaatacctttgtttatatgtacttcagaaactgtaagcagaaacttttctatgtacttttatgaaatagcacctcattatcaaccttccggagggggattttctgtaatatgctttacttatgctgcaatgtatcaattatttacaaaagtattagcattttggacacaaagtaatgatactttaccattaataagatacacaggatgcaacataaaactatttaactcataccacacagactacataacaacataccacaactgtggacctatgaaaccaaacttaataacatacaatgcaacacacccacacgcattacaattaaacaatagaagaaagattatgccatgtataaaagacagaccaagaaaaagaccttacacaaaactaaaaattaaacctagatcagaaatgacaaatagatggttctttcaaagtgaaataaatgaacaaccactactaatactgcaaacatcagctatgtctctagatagaatgtttgctaactccaactcattaagcaccacaataggattcactagtattaacacagaattctttcaatttcataactttaaactagaatccacacaaggatactcacctagtgaccaaaaatggatatgggcactagaaaatggaacaccagatataactaaagaaaaagtaattaacctcacatttttaggaactacagaactatacacagaaggaaaaccaataaaaaaagtaatcagacccaacggagaaacatggggaaaaacaatagaaagatacctagtttcaaacgcagactggggaaatccattctcacctaaatacctaacacaagaagtaactgttttatatacaaatatgtcaccacacacactaacagaacgatggaaaaatgcagaccaaaacacagaaataggcaacggagtatttcaaacacctacaaaaccattactaacagaatgtagatacaatccatacgcagacaatggagacaaccacatatttttagaatcaataaataaaagagaacaacacccttggcaacaacctaccgaccctaaactagaaggcactaatttacctatatggctaagtacttttgggttcatagactggcaaaaaaacagactaggagatagcgccgacctagactttgtaatgctcattgtaagtaaccatattacaccaaaaatgggattttatctgcctatagacgaagactttttaaaaggcagatccccatttcaaccagaagaaacaagaccatt
| 0
| 2
| 0.5
| 0
| 114
|
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] |
|
30
| 150,317
| 117
|
OR134833.1
|
Bos taurus
|
Lumpy skin disease virus
|
Lumpy skin disease virus
|
skin
|
Poxviridae
|
Capripoxvirus
|
dsDNA
|
OR134833.1 |Lumpy skin disease virus strain LSDV/Albania/1573/2016, complete genome||Lumpy skin disease virus||2023-10-22T00:00:00Z|Sciensano, Exotic and vector-borne diseases|Belgium|Mathijs,E., Van Borm,S., Vandenbussche,F., Koleci,X., Vodica,A.||Lumpy skin disease virus|Capripoxvirus|complete|Poxviridae|dsDNA|150317|GenBank||||Albania|Albania||Bos taurus|skin|2016-08-16||
|
tataaagttgttttgtgtttcttctttggaacaatcatcatgtgcgaaaattttaaatccatttccctctgttagaagtcctccaggtccttgaattttataacagccagttttaatcgctctaaaattctctgtttggatacataatcctacttcgatttcccatgtgttattttcttcttctgtgcatctctttattgatattccgcttacactactagtaaaaatgaatagttgcaaaaagaaaatgaacaaagttaatgatgacatattggttggttgttttgacgtattgacgacacaaaccacctcgatactactgaacttttttttctattattaactaaaaaaacttgaaaacaaacctttctttttttcctctttcttaaaaggatttatatatgatagaaaactgaaactttttttcttttgcctaaaggggtttatattaaacgaaaacagattttttgtcgatgaggtaatcatgttataaggattcattaaccctatcattgcccaaaaaaacttcaaaaataattatatagagtagtatttaccaccaacatgaaaacaaacacaaaaataatactattctgttatgttattcttagtttgtatgtatttagttgtgcaatagcatcggctaaaaaatgtaacgacgttagctttgattacatattaaaagatttacgttcagaatttagcaaaataaaaagttttgttcaagacaatgatcaagaaaatatgatgctattaagtcaatcaatgttggacaagttgacgagtcgcataggatgtaaatctttatcggatatgataaaattttatttaaatgatgttttaccaaatgcagaaaaaatagaacacatgaaaaataaaataacttcaataggagaaaaattaaaatcgttaaaagaaaaactcatatcgtgtgattttttacattgtgaaaatcatgacgaaataaaaacagttaaaacaatttttaacaaattaaaagataaaggtatttataaggctatgggagagtttgatattttcattaattacttagaaaagtacatagttaaaaagtaatcaatctaacttataaaactacaacattatagtttctttttatgtcatagttaatactatctttgtttattcttaagttacatgtataaataccactatcatcatgtgttgtgttttttataaccaacttaagtttgttactctgtatcctatcatcgtataacactttgttattatttttataccaatctagtgttttatttttaaaataactactaataaggtcaatatccatacaatgtactgttgagttaagtccttcgttgaatctgtaagtaattgtttcttctttatccaaaaaagttaattttatagacatttcttcacaaatattatgtgaacgaaatctacaaatataaattccgtcatcgatatttataacagggtacaaccataagttgtttcctataagttgtacccttgacgcgttttcattatttacttctatttttttaaaatttttgtaatcgttataatttcttacaaacgatagagagttagtttgaaaccatgttatgtcatatgatgttatattttttttaaaaaaaatagattttttataattatccaatggacattttaaaaatgcaggatctttgaaatttacattcactggagttagaataccccctctatatttacaatattctgataaaaatgcgcttttaaaacaacatattaatatgataaaatttataactttcattttgttgttgtgttatttattttaaatggaaaaatagcatcgaactacgttaaaatttatataatgtatttcagaattacagttccctgttaatacataataatttattttatcttttaagttattatttacgtacttaactaagtcttttaaaaaatcaaaatcgttttttgattttggataccatatttcatcacacgacgaatttaaggctttccacgctatattttttccatcttcgttttttaagtaatcaaaaataata
| 1
| 92
| 0
| 0
| 117
|
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] |
30
| 150,317
| 121
|
OR134833.1
|
Bos taurus
|
Lumpy skin disease virus
|
Lumpy skin disease virus
|
skin
|
Poxviridae
|
Capripoxvirus
|
dsDNA
|
OR134833.1 |Lumpy skin disease virus strain LSDV/Albania/1573/2016, complete genome||Lumpy skin disease virus||2023-10-22T00:00:00Z|Sciensano, Exotic and vector-borne diseases|Belgium|Mathijs,E., Van Borm,S., Vandenbussche,F., Koleci,X., Vodica,A.||Lumpy skin disease virus|Capripoxvirus|complete|Poxviridae|dsDNA|150317|GenBank||||Albania|Albania||Bos taurus|skin|2016-08-16||
|
ttttcccattttcatcttcttctgttatagatgatccaaaatcaattaatattttaactatttcaggttcgacattcttgttaaaagaaagataatgagctagtgctgataaattattatctctagttttaaaatttatatcggatccattttctatgagaaattttaatatttcaacattaactttatctttttcaacacacgaaaacaatggcgtttcatataagtcgttacaatcattaacaaattttatccatttctttactccatttatatcatcttgttcaacgtaataaaataatggattacaatatctataaaataagtaatctgtaaagtcattatcataatcgctacataatttttccttttccatagtaattgatgatggcaaactagcttattaataaaaagttatatttcatttttgtaaagtgtttttaaatttacatatttaattttttttgtgagatagttgtattctaagttgcgtaagttacatgtgaaattagcagatagatattttcttttaacttcttttatgattaatgcaattttataagagtttcctacgtacatttctctacctaagtaaatatttttacttctatcgtaatcaagtacattaactccgttaattaaccaaaatattgaacttccataaacacgttgtatgtttttagattctccaatacattccattaaaaagtttttacctaaagctattgtactatttaaaaaatttactgttaaatttatatcatctttaaatctttttttaattacgttattatgataataacgttttaatgccaagttttttggattacaccgtgtatccgtagttatggaacataaatatactccttcatcactcttagaaatatttcgtattagtaatttttctttgctttttttatatttaaaattattgtttattttttccctgtctttaaaccaatttacttcataagaacaattaaacgtatttataaagttttttgtatttatacacaacaactcatagtttgtgccaatgacagagtttatagtctcttttttataaacatctaacataacagatgaagtaaaataatatgttgagttatgtacattacatgcatatattccagaatcattttttgttatattatttatccacaggctatgcccaacagaatatactctatcggtatttttgaactcatgaaaagatttttttacatctcctgttttaacgtatttattgtaattaactaaaaaccattttactgttgtattataatttaaagtatcaacatatggacattttactatttctgagttattttcgaacgttttcatcacggattgtagacaaccaaagcttaattttgtaaaagcaagaattttaacattgataatcagtaaatagaaaataaatgtcgttactttttccatcttatccaataagattttaatcttacaagatttaaaaaaaaatattttttttttaatttttagttgttattataaacttttacatcaatatagccctttattttgttcatccttataatttgcacattaattaatttattaactaatgttttttttatattattcatttgatccatgtttatattaacataatctattacaagtgcttccaaaccatagttgattagttttacatatacaatgttatcttttataaacacaataccatctgttacttcattaatgttaggtaaaacgtaacaaaatgccaaatcgctattcgatgacatttttgctctcactttctgaaacttttttttcagaaataccgtttttgtgctcgcatgtattatttaaacaattccatatatcgttcaatattaaagtttttttaattggttcctccaaatccattagaacacatgttaagttagtatttttaatttcttcagttacgtttttaattatcaaatcagatctaggttctttgccacattttaaaggttttttgttaaaatacattcgttctttataaatgtcgccgttcataaattcaacaaacgaattat
| 5
| 92
| 0.1
| 0
| 121
|
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] |
30
| 150,317
| 126
|
OR134833.1
|
Bos taurus
|
Lumpy skin disease virus
|
Lumpy skin disease virus
|
skin
|
Poxviridae
|
Capripoxvirus
|
dsDNA
|
OR134833.1 |Lumpy skin disease virus strain LSDV/Albania/1573/2016, complete genome||Lumpy skin disease virus||2023-10-22T00:00:00Z|Sciensano, Exotic and vector-borne diseases|Belgium|Mathijs,E., Van Borm,S., Vandenbussche,F., Koleci,X., Vodica,A.||Lumpy skin disease virus|Capripoxvirus|complete|Poxviridae|dsDNA|150317|GenBank||||Albania|Albania||Bos taurus|skin|2016-08-16||
|
tttctaaaaaagaaataggatgtaatattgatatttttaacctaaatttatcacacgtatttttattacaacatataataaattcttctaatgtattataaaattctttatctgtttctatttctggatatgtttttaaaagtgtatgaatgaaaaaatgaaaatcgtagtaccaattatgttcaacttttatattattttttatttttttatttattatgtttgcaacctgtgaaaagtcaaaatcatttaaacaagcttttataggttcattaaaaatataagtattttcatttaatgatatttttattgattcgtccgaatcaaaaattaaaatattatcaggttttaaatcaacatgtaaaaagttgttacagcatggtaattcatatattttaacatataaaagagccatctgtaaaaaaataaattttatatactcaactaatgacttaaaacctaattcaatagccattttttcactaactttatcagaagagaattttgccaaaggaaatattattatatttcctctatcgtataaataattagaccgtttttcgtgttcaaaaaaatgaaacatgtgcgtaaaatagtttattacatttacattactttgtataactatagggtaaaaatatgataatagttttacaaattttacatctccttttttctcattgaacgattttaaaaaatatttatgtgaaaaattacttatacttaatttttgatcatccattgtttgaataagtaataatatcatatatagtacccgcttatataagttatataaaaatgtaagtttaaagtttacacccattgcccatgcacacactattagttttttttcatctccctttaagttattaaacaagaactttggtattgtatattctgcagttgtttcaataggactatactgtttattaggttcataaacaaattttacaacgtacttatcaattttaaaaactataccatatcctccagttgaaatatgataaaagtcatcattaattggataaaatctcttatctttttgctgaaaaaacgatggattgatatattcgttttcagcgattttatttaatgtttcctttgtaaactttttaaagtatcttattaacctaacattaggtgaccaactttggtaaatatctaattgagatattacataatcaaaataaatatcatcgcctaatactgttgtagattttatatcttcatcgttatcccattggcattctaatgagttatcatctatttccatgattaccatttattgtataaaaagcgtttattataatattatagttaataataatattttactttatttattatatattcgttaatcaattgataatgttttatattataatctaaaagtttgtctatttctaaaaataaatttgtgattttttcccaaagggtttcatcatcgtcgatcttgtactttttttgaaactatacaaaaagttattatttttatttaaaatagtatcataaataacaaagttgttaggaatataacaattattttcttttttcattaccttttttaactttataattttattaactaattcgattatttttaatcttctaattgaaataatatttgatgttatgtttaatgtttcttcattattctttttataaaaaaatgctttttctgtaattgataattctttaggagataagattgtcactaaataaattgattcgccacctatttgtggtaaaaaattaaccccattaagaaagccactcataataaaatttccttcgtctatatttatttttaaaaatgtagtatctggaataaataatccagatattcctttattcttaacacaggccgtaatgacaacgctattactaaatgttgattcgttttaaaaaaatgcatttccgtgttttaatttaaccaaatacgatcctataactgtaaaaaactcttcattgagtaaaagtttataaaaaatatttacatttatttctttcaatgaataaaatcctactttttttttacttatatctaa
| 10
| 92
| 0.1
| 0
| 126
|
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