tabs: - name: General cards: - name: Program field: cases.project.program.name values: - APOLLO - BEATAML1.0 - CDDP EAGLE - CGCI - CMI - CPTAC - CTSP - EXCEPTIONAL RESPONDERS - FM - HCMI - MATCH - MMRF - MP2PRT - NCICCR - OHSU - ORGANOID - REBC - TARGET - TCGA - TRIO - VAREPOP - WCDT - name: Project field: cases.project.project_id values: - APOLLO-LUAD - BEATAML1.0-COHORT - BEATAML1.0-CRENOLANIB - CDDP EAGLE-1 - CGCI-BLGSP - CGCI-HTMCP-CC - CGCI-HTMCP-DLBCL - CGCI-HTMCP-LC - CMI-ASC - CMI-MBC - CMI-MPC - CPTAC-2 - CPTAC-3 - CTSP-DLBCL1 - EXCEPTIONAL RESPONDERS-ER - FM-AD - HCMI-CMDC - MATCH-B - MATCH-C1 - MATCH-H - MATCH-I - MATCH-N - MATCH-P - MATCH-Q - MATCH-R - MATCH-S1 - MATCH-S2 - MATCH-U - MATCH-W - MATCH-Y - MATCH-Z1A - MATCH-Z1B - MATCH-Z1D - MATCH-Z1I - MMRF-COMMPASS - MP2PRT-ALL - MP2PRT-WT - NCICCR-DLBCL - OHSU-CNL - ORGANOID-PANCREATIC - REBC-THYR - TARGET-ALL-P1 - TARGET-ALL-P2 - TARGET-ALL-P3 - TARGET-AML - TARGET-CCSK - TARGET-NBL - TARGET-OS - TARGET-RT - TARGET-WT - TCGA-ACC - TCGA-BLCA - TCGA-BRCA - TCGA-CESC - TCGA-CHOL - TCGA-COAD - TCGA-DLBC - TCGA-ESCA - TCGA-GBM - TCGA-HNSC - TCGA-KICH - TCGA-KIRC - TCGA-KIRP - TCGA-LAML - TCGA-LGG - TCGA-LIHC - TCGA-LUAD - TCGA-LUSC - TCGA-MESO - TCGA-OV - TCGA-PAAD - TCGA-PCPG - TCGA-PRAD - TCGA-READ - TCGA-SARC - TCGA-SKCM - TCGA-STAD - TCGA-TGCT - TCGA-THCA - TCGA-THYM - TCGA-UCEC - TCGA-UCS - TCGA-UVM - TRIO-CRU - VAREPOP-APOLLO - WCDT-MCRPC - name: Disease Type field: cases.disease_type values: - acinar cell neoplasms - acute lymphoblastic leukemia - adenomas and adenocarcinomas - adnexal and skin appendage neoplasms - basal cell neoplasms - blood vessel tumors - chronic myeloproliferative disorders - complex epithelial neoplasms - complex mixed and stromal neoplasms - cystic, mucinous and serous neoplasms - ductal and lobular neoplasms - epithelial neoplasms, nos - fibroepithelial neoplasms - fibromatous neoplasms - germ cell neoplasms - gliomas - leukemias, nos - lipomatous neoplasms - lymphoid leukemias - mature b-cell lymphomas - mature t- and nk-cell lymphomas - meningiomas - mesothelial neoplasms - miscellaneous bone tumors - miscellaneous tumors - mucoepidermoid neoplasms - myelodysplastic syndromes - myeloid leukemias - myomatous neoplasms - neoplasms, nos - nerve sheath tumors - neuroepitheliomatous neoplasms - nevi and melanomas - not applicable - not reported - osseous and chondromatous neoplasms - paragangliomas and glomus tumors - plasma cell tumors - soft tissue tumors and sarcomas, nos - specialized gonadal neoplasms - squamous cell neoplasms - synovial-like neoplasms - thymic epithelial neoplasms - transitional cell papillomas and carcinomas - unknown - name: Primary Diagnosis field: cases.diagnoses.primary_diagnosis values: - acinar adenocarcinoma - acinar cell carcinoma - acinar cell tumor - acute leukemia, nos - acute lymphoblastic leukemia, nos - acute lymphocytic leukemia - acute monoblastic and monocytic leukemia - acute monocytic leukemia - acute myeloid leukemia with inv(3)(q21q26.2) or t(3;3)(q21;q26.2); rpn1-evi1 - acute myeloid leukemia with maturation - acute myeloid leukemia with mutated cebpa - acute myeloid leukemia with mutated npm1 - acute myeloid leukemia with myelodysplasia-related changes - acute myeloid leukemia with t(8;21)(q22;q22); runx1-runx1t1 - acute myeloid leukemia with t(9;11)(p22;q23); mllt3-mll - acute myeloid leukemia without maturation - acute myeloid leukemia, cbf-beta/myh11 - acute myeloid leukemia, minimal differentiation - acute myeloid leukemia, nos - acute myelomonocytic leukemia - acute promyelocytic leukaemia, pml-rar-alpha - acute promyelocytic leukaemia, t(15;17)(q22;q11-12) - adenocarcinoma in tubulovillous adenoma - adenocarcinoma with mixed subtypes - adenocarcinoma, diffuse type - adenocarcinoma, endocervical type - adenocarcinoma, intestinal type - adenocarcinoma, metastatic, nos - adenocarcinoma, nos - adenoid cystic carcinoma - adenosquamous carcinoma - adnexal carcinoma - adrenal cortical carcinoma - amelanotic melanoma - angiosarcoma - astrocytoma, anaplastic - astrocytoma, nos - atypical carcinoid tumor - atypical chronic myeloid leukemia, bcr/abl negative - basal cell carcinoma, nos - basaloid squamous cell carcinoma - bronchio-alveolar carcinoma, mucinous - bronchiolo-alveolar carcinoma, non-mucinous - burkitt lymphoma, nos (includes all variants) - burkitt-like lymphoma - carcinoid tumor, nos - carcinoma in situ, nos - carcinoma, anaplastic, nos - carcinoma, diffuse type - carcinoma, nos - carcinoma, undifferentiated, nos - carcinosarcoma, nos - cholangiocarcinoma - chordoma, nos - chronic myelomonocytic leukemia, nos - chronic neutrophilic leukemia - clear cell adenocarcinoma, nos - clear cell carcinoma - clear cell sarcoma of kidney - collecting duct carcinoma - combined hepatocellular carcinoma and cholangiocarcinoma - combined small cell carcinoma - common precursor b all - dedifferentiated liposarcoma - diffuse large b-cell lymphoma, nos - duct adenocarcinoma, nos - duct carcinoma, nos - ductal carcinoma in situ, nos - embryonal carcinoma, nos - endometrioid adenocarcinoma, nos - ependymoma, nos - epithelial tumor, malignant - epithelioid cell melanoma - epithelioid mesothelioma, malignant - esthesioneuroblastoma - extra-adrenal paraganglioma, malignant - extra-adrenal paraganglioma, nos - fibromyxosarcoma - follicular carcinoma, nos - ganglioneuroblastoma - gastrointestinal stromal tumor, nos - germ cell tumor, nos - glioblastoma - glioblastoma multiforme - glioma, malignant - granulosa cell tumor, nos - hepatocellular carcinoma, clear cell type - hepatocellular carcinoma, fibrolamellar - hepatocellular carcinoma, nos - hodgkin lymphoma, nos - infiltrating duct and lobular carcinoma - infiltrating duct carcinoma, nos - infiltrating duct mixed with other types of carcinoma - infiltrating lobular carcinoma, nos - infiltrating lobular mixed with other types of carcinoma - inflammatory carcinoma - intraductal carcinoma, noninfiltrating, nos - invasive mammary carcinoma - invasive micropapillary carcinoma - large cell carcinoma, nos - large cell neuroendocrine carcinoma - leiomyosarcoma, nos - leukemia, nos - lobular carcinoma, nos - malignant fibrous histiocytoma - malignant lymphoma, non-hodgkin, nos - malignant melanoma, nos - malignant peripheral nerve sheath tumor - malignant rhabdoid tumor - medullary carcinoma, nos - medulloblastoma, nos - melanoma, nos - meningioma, nos - merkel cell carcinoma - mesothelioma, biphasic, malignant - mesothelioma, malignant - mesothelioma, nos - metaplastic carcinoma, nos - mixed epithelioid and spindle cell melanoma - mixed germ cell tumor - mixed glioma - mucinous adenocarcinoma - mucinous adenocarcinoma, endocervical type - mucinous carcinoma - mucoepidermoid carcinoma - mullerian mixed tumor - multiple myeloma - myelodysplastic syndrome, unclassifiable - myelodysplastic/myeloproliferative neoplasm, unclassifiable - myeloid sarcoma - myloproliferative neoplasm, unclassifiable - myoepithelial carcinoma - myxoid leiomyosarcoma - neoplasm, malignant - neoplasm, nos - nephroblastoma, nos - neuroblastoma, nos - neuroendocrine carcinoma, nos - nodular melanoma - non-small cell carcinoma - not reported - oligodendroglioma, anaplastic - oligodendroglioma, nos - oncocytoma - osteosarcoma, nos - papillary adenocarcinoma, nos - papillary carcinoma, columnar cell - papillary carcinoma, follicular variant - papillary carcinoma, nos - papillary renal cell carcinoma - papillary serous adenocarcinoma - papillary serous cystadenocarcinoma - papillary squamous cell carcinoma - papillary transitional cell carcinoma - papillary transitional cell carcinoma, non-invasive - paraganglioma, nos - pheochromocytoma, malignant - pheochromocytoma, nos - pituitary adenoma, nos - precursor b-cell lymphoblastic leukemia - precursor cell lymphoblastic leukemia, nos - precursor cell lymphoblastic leukemia, not phenotyped - renal cell carcinoma, chromophobe type - renal cell carcinoma, nos - sarcomatoid carcinoma - seminoma, nos - serous adenocarcinoma, nos - serous carcinoma, nos - serous cystadenocarcinoma, nos - serous surface papillary carcinoma - sex cord tumor, nos - signet ring cell carcinoma - small cell carcinoma, nos - solid carcinoma, nos - spindle cell carcinoma, nos - spindle cell melanoma, nos - spindle cell melanoma, type b - squamous cell carcinoma, keratinizing, nos - squamous cell carcinoma, large cell, nonkeratinizing, nos - squamous cell carcinoma, nonkeratinizing, nos - squamous cell carcinoma, nos - superficial spreading melanoma - synovial sarcoma, spindle cell - teratocarcinoma - therapy related myeloid neoplasm - thymic carcinoma, nos - thymoma, nos - thymoma, type a, malignant - thymoma, type ab, malignant - thymoma, type ab, nos - thymoma, type b1, malignant - thymoma, type b2, malignant - thymoma, type b3, malignant - transitional cell carcinoma - tubular adenocarcinoma - tumor, nos - undifferentiated sarcoma - unknown - urothelial carcinoma, nos - wilms tumor - name: Primary Site field: cases.primary_site values: - accessory sinuses - adrenal gland - anus and anal canal - base of tongue - bladder - bones, joints and articular cartilage of limbs - bones, joints and articular cartilage of other and unspecified sites - brain - breast - bronchus and lung - cervix uteri - colon - connective, subcutaneous and other soft tissues - corpus uteri - esophagus - eye and adnexa - floor of mouth - gallbladder - gum - heart, mediastinum, and pleura - hematopoietic and reticuloendothelial systems - hypopharynx - kidney - larynx - lip - liver and intrahepatic bile ducts - lymph nodes - meninges - nasal cavity and middle ear - nasopharynx - not reported - oropharynx - other and ill-defined digestive organs - other and ill-defined sites - other and ill-defined sites in lip, oral cavity and pharynx - other and ill-defined sites within respiratory system and intrathoracic organs - other and unspecified female genital organs - other and unspecified major salivary glands - other and unspecified male genital organs - other and unspecified parts of biliary tract - other and unspecified parts of mouth - other and unspecified parts of tongue - other and unspecified urinary organs - other endocrine glands and related structures - ovary - palate - pancreas - parotid gland - penis - peripheral nerves and autonomic nervous system - prostate gland - rectosigmoid junction - rectum - renal pelvis - retroperitoneum and peritoneum - skin - small intestine - spinal cord, cranial nerves, and other parts of central nervous system - stomach - testis - thymus - thyroid gland - tonsil - trachea - unknown - ureter - uterus, nos - vagina - vulva - name: Tissue or Organ of Origin field: cases.diagnoses.tissue_or_organ_of_origin values: - abdomen, nos - adrenal gland, nos - ampulla of vater - anal canal - anterior floor of mouth - anterior mediastinum - anterior wall of bladder - anus, nos - aortic body and other paraganglia - appendix - ascending colon - autonomic nervous system, nos - base of tongue, nos - biliary tract, nos - bladder neck - bladder, nos - blood - body of pancreas - body of stomach - bone marrow - bone, nos - bones of skull and face and associated joints - border of tongue - brain stem - brain, nos - breast, nos - cardia, nos - carotid body - cecum - cerebellum, nos - cerebrum - cervix uteri - cheek mucosa - choroid - ciliary body - colon, nos - connective, subcutaneous and other soft tissues of abdomen - connective, subcutaneous and other soft tissues of head, face, and neck - connective, subcutaneous and other soft tissues of lower limb and hip - connective, subcutaneous and other soft tissues of pelvis - connective, subcutaneous and other soft tissues of thorax - connective, subcutaneous and other soft tissues of trunk, nos - connective, subcutaneous and other soft tissues of upper limb and shoulder - connective, subcutaneous and other soft tissues, nos - corpus uteri - cortex of adrenal gland - descending colon - dome of bladder - duodenum - endocervix - endocrine gland, nos - endometrium - esophagus, nos - exocervix - external ear - external upper lip - extrahepatic bile duct - eye, nos - eyelid - fallopian tube - female genital tract, nos - floor of mouth, nos - frontal lobe - fundus of stomach - fundus uteri - gallbladder - gastric antrum - gastrointestinal tract, nos - gum, nos - hard palate - head of pancreas - head, face or neck, nos - heart - hematopoietic system, nos - hepatic flexure of colon - hypopharynx, nos - ileum - intestinal tract, nos - intra-abdominal lymph nodes - intrahepatic bile duct - intrathoracic lymph nodes - isthmus uteri - jejunum - kidney, nos - larynx, nos - lateral wall of bladder - lesser curvature of stomach, nos - lip, nos - liver - long bones of lower limb and associated joints - long bones of upper limb, scapula and associated joints - lower gum - lower limb, nos - lower lobe, lung - lower third of esophagus - lower-inner quadrant of breast - lower-outer quadrant of breast - lung, nos - lymph node, nos - lymph nodes of axilla or arm - lymph nodes of head, face and neck - lymph nodes of inguinal region or leg - lymph nodes of multiple regions - main bronchus - major salivary gland, nos - mandible - mediastinum, nos - medulla of adrenal gland - meninges, nos - middle lobe, lung - middle third of esophagus - mouth, nos - myometrium - nasal cavity - nasopharynx, nos - nervous system, nos - not reported - occipital lobe - orbit, nos - oropharynx, nos - other ill-defined sites - ovary - overlapping lesion of brain - overlapping lesion of breast - overlapping lesion of colon - overlapping lesion of eye and adnexa - overlapping lesion of lip, oral cavity and pharynx - overlapping lesion of lung - overlapping lesion of nasopharynx - overlapping lesion of pancreas - overlapping lesion of retroperitoneum and peritoneum - pancreas, nos - parietal lobe - parotid gland - pelvic bones, sacrum, coccyx and associated joints - pelvic lymph nodes - pelvis, nos - penis, nos - peripheral nerves and autonomic nervous system of abdomen - peripheral nerves and autonomic nervous system of head, face, and neck - peripheral nerves and autonomic nervous system of thorax - peripheral nerves and autonomic nervous system of trunk, nos - peripheral nerves and autonomic nervous system of upper limb and shoulder - peritoneum, nos - pharynx, nos - pituitary gland - pleura, nos - posterior mediastinum - posterior wall of bladder - prostate gland - rectosigmoid junction - rectum, nos - renal pelvis - retromolar area - retroperitoneum - rib, sternum, clavicle and associated joints - scrotum, nos - short bones of lower limb and associated joints - sigmoid colon - skin of lower limb and hip - skin of other and unspecified parts of face - skin of scalp and neck - skin of trunk - skin of upper limb and shoulder - skin, nos - small intestine, nos - specified parts of peritoneum - spinal cord - spinal meninges - spleen - splenic flexure of colon - stomach, nos - submandibular gland - supraglottis - tail of pancreas - temporal lobe - testis, nos - thoracic esophagus - thorax, nos - thymus - thyroid gland - tongue, nos - tonsil, nos - trachea - transverse colon - trigone of bladder - unknown - unknown primary site - upper limb, nos - upper lobe, lung - upper third of esophagus - upper-inner quadrant of breast - upper-outer quadrant of breast - ureter - urethra - urinary system, nos - uterus, nos - vagina, nos - vertebral column - vulva, nos - name: Demographic cards: - name: Gender field: cases.demographic.gender values: - female - male - not reported - unknown - unspecified - name: Race field: cases.demographic.race values: - american indian or alaska native - asian - black or african american - native hawaiian or other pacific islander - not allowed to collect - not reported - other - unknown - white - name: Ethnicity field: cases.demographic.ethnicity values: - hispanic or latino - not hispanic or latino - not reported - unknown - name: Age at Diagnosis field: cases.diagnoses.age_at_diagnosis values: type: range min: 0 max: 32872 unit: days - name: Vital Status field: cases.demographic.vital_status values: - alive - dead - not reported - unknown - name: General Diagnosis cards: - name: Ajcc Clinical Stage field: cases.diagnoses.ajcc_clinical_stage values: - not reported - stage 0 - stage i - stage ia - stage ia2 - stage ib - stage ii - stage iia - stage iib - stage iic - stage iii - stage iiia - stage iiib - stage iiic - stage is - stage iv - stage iva - stage ivb - stage ivc - stage x - name: Ajcc Pathologic Stage field: cases.diagnoses.ajcc_pathologic_stage values: - not reported - stage 0 - stage 0a - stage 0is - stage i - stage ia - stage ia1 - stage ia2 - stage ia3 - stage ib - stage ib1 - stage ic - stage ii - stage iia - stage iib - stage iic - stage iii - stage iiia - stage iiia2 - stage iiib - stage iiic - stage iiic1 - stage iiic2 - stage is - stage iv - stage iva - stage ivb - stage ivc - stage tis - stage x - unknown - name: Uicc Clinical Stage field: cases.diagnoses.uicc_clinical_stage values: - not reported - stage 0 - stage i - stage ia - stage ib - stage iia - stage iib - stage iic - stage iii - stage iiia - stage iiib - stage iiic - stage iv - stage iva - name: Uicc Pathologic Stage field: cases.diagnoses.uicc_pathologic_stage values: - not reported - stage 0 - stage i - stage ia - stage ib - stage iia - stage iib - stage iii - stage iiia - stage iiib - stage iiic - stage iv - stage iva - name: Tumor Grade field: cases.diagnoses.tumor_grade values: - g1 - g2 - g3 - g4 - gb - gx - high grade - low grade - not reported - unknown - name: Morphology field: cases.diagnoses.morphology values: - 8010/2 - 8010/3 - 8012/3 - 8013/3 - 8020/3 - 8021/3 - 8022/3 - 8032/3 - 8033/3 - 8041/3 - 8041/34 - 8045/3 - 8046/3 - 8050/3 - 8052/3 - 8070/2 - 8070/3 - 8071/3 - 8072/3 - 8083/3 - 8084/3 - 8090/3 - 8120/3 - 8123/3 - 8130/3 - 8140/3 - 8140/6 - 8144/3 - 8145/3 - 8160/3 - 8170/3 - 8171/3 - 8174/3 - 8180/3 - 8200/3 - 8211/3 - 8230/3 - 8240/3 - 8246/3 - 8247/3 - 8249/3 - 8250/3 - 8252/3 - 8253/3 - 8255/3 - 8260/3 - 8263/0 - 8263/3 - 8272/0 - 8290/0 - 8310/3 - 8312/3 - 8317/3 - 8319/3 - 8330/3 - 8340/3 - 8344/3 - 8350/3 - 8370/1 - 8370/3 - 8380/3 - 8384/3 - 8390/3 - 8430/3 - 8441/3 - 8452/1 - 8460/3 - 8461/3 - 8480/3 - 8482/3 - 8490/3 - 8500/2 - 8500/3 - 8500/6 - 8503/3 - 8507/3 - 8510/3 - 8520/2 - 8520/3 - 8522/3 - 8523/3 - 8524/3 - 8530/3 - 8541/3 - 8550/1 - 8550/3 - 8560/3 - 8575/3 - 8580/1 - 8581/1 - 8581/3 - 8582/1 - 8582/3 - 8583/1 - 8583/3 - 8584/1 - 8584/3 - 8585/3 - 8586/3 - 8590/1 - 8620/1 - 8680/1 - 8693/1 - 8693/3 - 8700/0 - 8700/3 - 8720/3 - 8720/6 - 8721/3 - 8730/3 - 8742/3 - 8743/3 - 8744/3 - 8770/3 - 8771/3 - 8772/3 - 8774/3 - 8800/3 - 8805/3 - 8811/3 - 8822/1 - 8830/3 - 8851/3 - 8858/3 - 8890/3 - 8896/3 - 8936/1 - 8950/3 - 8960/3 - 8963/3 - 8964/3 - 8980/3 - 8982/3 - 9020/3 - 9041/3 - 9050/3 - 9052/3 - 9053/3 - 9061/3 - 9064/3 - 9070/3 - 9071/3 - 9080/0 - 9080/3 - 9081/3 - 9085/3 - 9180/3 - 9370/3 - 9380/3 - 9382/3 - 9391/3 - 9400/3 - 9401/3 - 9440/3 - 9450/3 - 9451/3 - 9470/3 - 9490/3 - 9500/3 - 9522/3 - 9530/0 - 9540/3 - 9591/3 - 9650/3 - 9680/3 - 9687/3 - 9690/3 - 9728/3 - 9732/3 - 9800/3 - 9801/3 - 9809/3 - 9823/3 - 9835/3 - 9836/3 - 9840/3 - 9861/3 - 9865/3 - 9866/3 - 9867/3 - 9869/3 - 9871/3 - 9872/3 - 9873/3 - 9874/3 - 9876/3 - 9891/3 - 9895/3 - 9896/3 - 9897/3 - 9910/3 - 9920/3 - 9930/3 - 9945/3 - 9963/3 - 9975/3 - 9983/3 - 9989/3 - not reported - unknown - name: Year Of Diagnosis field: cases.diagnoses.year_of_diagnosis values: type: range min: 1900 max: 2050 - name: Site Of Resection Or Biopsy field: cases.diagnoses.site_of_resection_or_biopsy values: - abdomen, nos - adrenal gland, nos - ampulla of vater - anal canal - anterior mediastinum - anus, nos - aortic body and other paraganglia - appendix - ascending colon - axillary tail of breast - base of tongue, nos - biliary tract, nos - bladder, nos - blood - body of pancreas - body of stomach - bone marrow - bone, nos - bones of skull and face and associated joints - border of tongue - brain stem - brain, nos - breast, nos - cardia, nos - cecum - cerebellum, nos - cerebrum - cervix uteri - cheek mucosa - choroid - ciliary body - colon, nos - connective, subcutaneous and other soft tissues of abdomen - connective, subcutaneous and other soft tissues of head, face, and neck - connective, subcutaneous and other soft tissues of lower limb and hip - connective, subcutaneous and other soft tissues of pelvis - connective, subcutaneous and other soft tissues of thorax - connective, subcutaneous and other soft tissues of trunk, nos - connective, subcutaneous and other soft tissues of upper limb and shoulder - connective, subcutaneous and other soft tissues, nos - corpus uteri - cortex of adrenal gland - descending colon - dome of bladder - duodenum - endometrium - esophagus, nos - external ear - extrahepatic bile duct - eye, nos - fallopian tube - floor of mouth, nos - frontal lobe - fundus uteri - gallbladder - gastric antrum - gastrointestinal tract, nos - glottis - gum, nos - head of pancreas - head, face or neck, nos - heart - hematopoietic system, nos - hepatic flexure of colon - ileum - intra-abdominal lymph nodes - intrathoracic lymph nodes - isthmus uteri - jejunum - kidney, nos - larynx, nos - lateral wall of bladder - lip, nos - liver - long bones of lower limb and associated joints - long bones of upper limb, scapula and associated joints - lower gum - lower lobe, lung - lower third of esophagus - lung, nos - lymph node, nos - lymph nodes of axilla or arm - lymph nodes of head, face and neck - lymph nodes of inguinal region or leg - main bronchus - major salivary gland, nos - mandible - mediastinum, nos - medulla of adrenal gland - middle lobe, lung - middle third of esophagus - mouth, nos - myometrium - nasal cavity - nervous system, nos - not reported - occipital lobe - orbit, nos - oropharynx, nos - other ill-defined sites - ovary - overlapping lesion of bladder - overlapping lesion of colon - overlapping lesion of connective, subcutaneous and other soft tissues - overlapping lesion of digestive system - overlapping lesion of eye and adnexa - overlapping lesion of female genital organs - overlapping lesion of ill-defined sites - overlapping lesion of lip, oral cavity and pharynx - overlapping lesion of rectum, anus and anal canal - pancreas, nos - pancreatic duct - pancreatic neck - parietal lobe - parotid gland - pelvic bones, sacrum, coccyx and associated joints - pelvic lymph nodes - pelvis, nos - penis, nos - peripheral nerves and autonomic nervous system of upper limb and shoulder - peritoneum, nos - pituitary gland - pleura, nos - prostate gland - rectosigmoid junction - rectum, nos - retroperitoneum - short bones of lower limb and associated joints - sigmoid colon - skin of lower limb and hip - skin of other and unspecified parts of face - skin of scalp and neck - skin of trunk - skin of upper limb and shoulder - skin, nos - small intestine, nos - specified parts of peritoneum - spermatic cord - spinal cord - spinal meninges - spleen - splenic flexure of colon - stomach, nos - submandibular gland - tail of pancreas - temporal lobe - testis, nos - thorax, nos - thymus - thyroid gland - tongue, nos - tonsil, nos - trachea - transverse colon - unknown - unknown primary site - upper lobe, lung - ureter - urethra - uterine adnexa - uterus, nos - vagina, nos - vertebral column - vestibule of mouth - vulva, nos - name: Sites Of Involvement field: cases.diagnoses.sites_of_involvement values: - abdomen - abdominal peritoneum - adnexa - adrenal gland, nos - anus, nos - appendix - ascites - bladder, nos - bone marrow - bone, nos - brain, brain stem - brain, cerebellum, nos - brain, cerebrum - brain, frontal lobe - brain, nos - brain, occipital lobe - brain, parietal - brain, temporal lobe - breast, left lower inner - breast, left lower outer - breast, left upper inner - breast, left upper outer - breast, nos - breast, right lower inner - breast, right lower outer - breast, right upper inner - breast, right upper outer - bronchus - central lung - central nervous system - cerebrospinal fluid - cervix - chest wall - colon, nos - common or superficial femoral vein - diaphragm - distant nodes - ear - epididymis - esophagus, lower third - esophagus, middle third - esophagus, nos - esophagus, upper third - eye - eye, choroid - eye, ciliary body - eye, iris - fallopian tube, left - fallopian tube, nos - fallopian tube, right - gallbladder - gastrointestinal tract - great blood vessel - groin - heart - hilar fat - inferior vena cava - kidney, nos - kidney, upper pole - liver - lung, nos - lymph node, axillary - lymph node, cervical - lymph node, femoral - lymph node, hilar - lymph node, iliac-common - lymph node, iliac-external - lymph node, inguinal - lymph node, mediastinal - lymph node, mesenteric - lymph node, nos - lymph node, para-aortic - lymph node, regional - lymph node, retroperitoneal - lymph node, splenic - lymph node, subcarinal - lymph node, submandibular - lymph node, supraclavicular - mandible - maxilla - mediastinal soft tissue - mesentery - mouth - nasopharynx - neck - not reported - ocular orbits - omentum - oropharynx - other - ovary, left - ovary, nos - ovary, right - pancreas body - pancreas head - pancreas tail - pancreas, nos - parametrium, left - parametrium, right - parotid gland - pelvic lymph node(s) - pelvic peritoneum - pelvic vein, common, external or iliac - pelvis - peri-aortic lymph node(s) - peri-orbital soft tissue - pericardium - perineum - peripheral blood - peripheral lung - peripheral nervous system - peritoneum, nos - pleura - prostate - rectum - renal vein - rete testis - retroperitoneum - scalp - sigmoid colon - sinus - skin - skin, extremities - skin, groin - skin, head and neck - skin, trunk - small intestine - soft tissue - spermatic cord - spleen - stomach - testes - thyroid - tongue - tonsil - transplanted kidney - transverse colon - tunica albuginea - tunica vaginalis - unknown - uterus - vagina - vertebrae - vulva, nos - name: Laterality field: cases.diagnoses.laterality values: - bilateral - left - midline - not reported - right - unknown - name: Disease Status and History cards: - name: Prior Malignancy field: cases.diagnoses.prior_malignancy values: - 'no' - not reported - unknown - 'yes' - name: Prior Treatment field: cases.diagnoses.prior_treatment values: - 'no' - not reported - unknown - 'yes' - name: Synchronous Malignancy field: cases.diagnoses.synchronous_malignancy values: - 'no' - not reported - unknown - 'yes' - name: Progression Or Recurrence field: cases.diagnoses.progression_or_recurrence values: - 'no' - not reported - unknown - 'yes' - name: Residual Disease field: cases.diagnoses.residual_disease values: - not reported - r0 - r1 - r2 - rx - unknown - name: Child Pugh Classification field: cases.diagnoses.child_pugh_classification values: - a - b - c - unknown - name: Ishak Fibrosis Score field: cases.diagnoses.ishak_fibrosis_score values: - 0 - no fibrosis - 1,2 - portal fibrosis - 3,4 - fibrous septa - 5 - nodular formation and incomplete cirrhosis - 6 - established cirrhosis - unknown - name: Disease Specific Classifications cards: - name: Ann Arbor Clinical Stage field: cases.diagnoses.ann_arbor_clinical_stage values: - not reported - stage i - stage ii - stage iii - stage iv - unknown - name: Ann Arbor Pathologic Stage field: cases.diagnoses.ann_arbor_pathologic_stage values: - not reported - stage i - stage ii - stage iii - stage iv - name: Cog Renal Stage field: cases.diagnoses.cog_renal_stage values: - stage i - stage ii - stage iii - stage iv - name: Figo Stage field: cases.diagnoses.figo_stage values: - not reported - stage i - stage ia - stage ia1 - stage ia2 - stage ib - stage ib1 - stage ib2 - stage ic - stage ic2 - stage ii - stage iia - stage iia1 - stage iia2 - stage iib - stage iic - stage iii - stage iiia - stage iiib - stage iiic - stage iiic1 - stage iiic2 - stage iv - stage iva - stage ivb - name: Igcccg Stage field: cases.diagnoses.igcccg_stage values: - good prognosis - intermediate prognosis - poor prognosis - name: Inss Stage field: cases.diagnoses.inss_stage values: - stage 1 - stage 2a - stage 2b - stage 3 - stage 4 - stage 4s - unknown - name: Iss Stage field: cases.diagnoses.iss_stage values: - i - ii - iii - unknown - name: Masaoka Stage field: cases.diagnoses.masaoka_stage values: - stage i - stage iia - stage iib - stage iii - stage iva - stage ivb - name: Inpc Grade field: cases.diagnoses.inpc_grade values: - differentiating - poorly differentiated - undifferentiated or poorly differentiated - unknown - name: Who Cns Grade field: cases.diagnoses.who_cns_grade values: - grade iv - name: Cog Neuroblastoma Risk Group field: cases.diagnoses.cog_neuroblastoma_risk_group values: - high risk - intermediate risk - low risk - name: Cog Rhabdomyosarcoma Risk Group field: cases.diagnoses.cog_rhabdomyosarcoma_risk_group values: - high risk - name: Eln Risk Classification field: cases.diagnoses.eln_risk_classification values: - adverse - favorable - intermediate - not reported - unknown - name: International Prognostic Index field: cases.diagnoses.international_prognostic_index values: - high risk - high-intermediate risk - low risk - low-intermediate risk - name: Wilms Tumor Histologic Subtype field: cases.diagnoses.wilms_tumor_histologic_subtype values: - favorable - unfavorable - name: Weiss Assessment Score field: cases.diagnoses.weiss_assessment_score values: - 2 - 3 - 4 - 5 - 6 - 7 - 8 - 9 - name: Treatment cards: - name: Best Overall Response field: cases.diagnoses.best_overall_response values: - cr-complete response - cru-complete response unconfirmed - nr-no response - pr-partial response - name: Therapeutic Agents field: cases.diagnoses.treatments.therapeutic_agents values: - abiraterone - ae37 peptide/gm-csf vaccine - afatinib - afatinib dimaleate - aldesleukin - altretamine - amifostine - aminocamptothecin - anastrozole - antineoplastic vaccine - arsenic trioxide - asparaginase - axitinib - azathioprine - banoxantrone - bcg solution - bendamustine - bevacizumab - bicalutamide - bleomycin - bortezomib - braf inhibitor - cabazitaxel - cabozantinib - cabozantinib s-malate - capecitabine - carboplatin - carfilzomib - carmustine - carmustine implant - cediranib - celecoxib - cetuximab - cilengitide - cintredekin besudotox - cisplatin - clinical trial - clinical trial agent - clodronate disodium - cositecan - cyclophosphamide - cytarabine - dabrafenib - dacarbazine - dactinomycin - daratumumab - dasatinib - daunorubicin - degarelix - dendritic cell vaccine - denosumab - dexamethasone - didox - docetaxel - doxifluridine - doxorubicin - doxorubicin hydrochloride - elotuzumab - epirubicin - epirubicin hydrochloride - erlotinib - erlotinib hydrochloride - etoposide - everolimus - exemestane - filgrastim - floxuridine - fluorouracil - fotemustine - fulvestrant - gefitinib - gemcitabine - gemcitabine hydrochloride - gemtuzumab ozogamicin - gonadotropin-releasing hormone analog - goserelin - goserelin acetate - gossypol - halichondrin b - hormone therapy - hpph - hydroxyurea - ifosfamide - imatinib - imatinib mesylate - iniparib - interferon - interferon alfa-2b - iodine i 131 monoclonal antibody 81c6 - ipilimumab - irinotecan - irinotecan hydrochloride - irofulven - isotretinoin - ixabepilone - ixazomib - ketoconazole - lapatinib - lenalidomide - letrozole - leucovorin - leucovorin calcium - leuprolide - leuprolide acetate - levetiracetam - levothyroxine - levothyroxine sodium - liothyronine sodium - lomustine - lonafarnib - mage-a3 peptide vaccine - megestrol acetate - melphalan - mercaptopurine - mesna - methotrexate - methylprednisolone - mitomycin - mitotane - mitoxantrone - mivobulin isethionate - monoclonal antibody 81c6 - motesanib diphosphate - motexafin gadolinium - nab-paclitaxel - nelipepimut-s - nivolumab - not otherwise specified - not reported - o6-benzylguanine - oregovomab - other - oxaliplatin - oxcarbazepine - paclitaxel - paclitaxel poliglumex - palonosetron hydrochloride - pamidronate disodium - panitumumab - panobinostat - patupilone - pazopanib - pazopanib hydrochloride - pegfilgrastim - peginterferon alfa-2b - pegylated liposomal doxorubicin hydrochloride - pembrolizumab - pemetrexed - pemetrexed disodium - pep-3-klh conjugate vaccine - platinum - polysaccharide-k - pomalidomide - porfimer sodium - prednisone - procarbazine - ramucirumab - recombinant interferon alfa - recombinant interferon alfa-2b - recombinant interleukin-12 - recombinant interleukin-2 - regorafenib - rituximab - sargramostim - selumetinib - sirolimus - sorafenib - sorafenib tosylate - streptozocin - sunitinib - sunitinib malate - tamoxifen - tamoxifen citrate - tegafur-gimeracil-oteracil potassium - temozolomide - temsirolimus - tetrathiomolybdate - thalidomide - thioguanine - tipifarnib - topotecan - topotecan hydrochloride - toremifene citrate - trabectedin - trametinib - trastuzumab - tretinoin - triptorelin - unknown - vandetanib - veliparib - vemurafenib - vinblastine - vincristine - vinorelbine - vinorelbine tartrate - vitespen - vorinostat - ziv-aflibercept - zoledronic acid - name: Treatment Intent Type field: cases.diagnoses.treatments.treatment_intent_type values: - adjuvant - androgen deprivation therapy (adt) - consolidation therapy - cure - first-line therapy - induction - maintenance therapy - neoadjuvant - not reported - palliative - prevention - re-excision - salvage - unknown - name: Treatment Outcome field: cases.diagnoses.treatments.treatment_outcome values: - complete response - no measurable disease - no response - not reported - partial response - persistent disease - progressive disease - stable disease - treatment ongoing - treatment stopped due to toxicity - unknown - name: Treatment Type field: cases.diagnoses.treatments.treatment_type values: - ablation or embolization, nos - ablation, cryo - ablation, ethanol injection - ablation, microwave - ablation, nos - ablation, radiofrequency - ancillary treatment - antiseizure treatment - biopsy, excisional - bisphosphonate therapy - brachytherapy, high dose - brachytherapy, low dose - brachytherapy, nos - chemoembolization - chemotherapy - distal pancreatectomy - external beam radiation - hormone therapy - hysterectomy, nos - i-131 radiation therapy - immunotherapy (including vaccines) - isolated limb perfusion (ilp) - not reported - organ transplantation - peptide receptor radionuclide therapy (prrt) - pharmaceutical therapy, nos - pleurodesis, nos - radiation therapy, nos - radiation, 2d conventional - radiation, 3d conformal - radiation, combination - radiation, cyberknife - radiation, external beam - radiation, implants - radiation, intensity-modulated radiotherapy - radiation, internal - radiation, mixed photon beam - radiation, proton beam - radiation, radioisotope - radiation, stereotactic/gamma knife/srs - radiation, systemic - radioembolization - radiosensitizing agent - stem cell transplantation, allogeneic - stem cell transplantation, autologous - stem cell transplantation, nos - stereotactic radiosurgery - steroid therapy - surgery, minimally invasive - surgery, nos - surgery, open - targeted molecular therapy - total pancreatectomy - unknown - whipple - name: Exposure cards: - name: Alcohol History field: cases.exposures.alcohol_history values: - 'no' - not reported - unknown - 'yes' - name: Alcohol Intensity field: cases.exposures.alcohol_intensity values: - drinker - heavy drinker - lifelong non-drinker - non-drinker - occasional drinker - social drinker - unknown - name: Tobacco Smoking Status field: cases.exposures.tobacco_smoking_status values: - current reformed smoker for < or = 15 yrs - current reformed smoker for > 15 yrs - current reformed smoker, duration not specified - current smoker - lifelong non-smoker - not reported - smoking history not documented - unknown - name: Cigarettes Per Day field: cases.exposures.cigarettes_per_day values: type: range min: 0 max: 99999 - name: Pack Years Smoked field: cases.exposures.pack_years_smoked values: type: range min: 0 max: 999999 unit: pack years - name: Tobacco Smoking Onset Year field: cases.exposures.tobacco_smoking_onset_year values: type: range min: 1950 max: 2050 - name: Biospecimen cards: - name: Tissue Type field: cases.samples.tissue_type values: - normal - peritumoral - tumor - name: Biospecimen Anatomic Site field: cases.samples.biospecimen_anatomic_site values: - abdomen - abdominal wall - adrenal - anus - appendix - axilla - back - bladder - blood - bone - bone marrow - brain - breast - bronchus - brow - buccal mucosa - cerebral cortex - cerebrum - cervical spine - cervix - chest - chest wall - chin - colon - esophagus - fallopian tube - forearm - forehead - frontal cortex - frontal lobe - gallbladder - gastrointestinal tract - groin - gum - head & neck - head, face or neck, nos - heart - hepatic flexure - ilium - kidney - large bowel - leg - leptomeninges - liver - lung - lymph node - lymph node(s) axilla - lymph node(s) cervical - lymph node(s) hilar - lymph node(s) iliac-common - lymph node(s) inguinal - lymph node(s) mammary - lymph node(s) mesenteric - lymph node(s) paraaortic - lymph node(s) pelvic - lymph node(s) regional - lymph node(s) retroperitoneal - lymph node(s) splenic - lymph node(s) submandibular - lymph node(s) supraclavicular - lymph nodes(s) mediastinal - mandible - maxilla - mediastinal soft tissue - mediastinum - mesentery - muscle - neck - not reported - occipital cortex - omentum - oral cavity - other - ovary - pancreas - parotid gland - pelvis - peritoneal cavity - peritoneum - pleura - prostate - retroperitoneum - rib - scalp - shoulder - sigmoid colon - sinus - skeletal muscle - skin - skull - small bowel - soft tissue - spinal column - spleen - stomach - temporal cortex - testis - thorax - thyroid - tongue - unknown - uterus - vagina - vein - vulva - name: Specimen Type field: cases.samples.specimen_type values: - 2d modified conditionally reprogrammed cells - 3d air-liquid interface organoid - 3d neurosphere - 3d organoid - adherent cell line - bone marrow components nos - bone marrow nos - buccal cells - buffy coat - cell - derived cell line - fibroblasts from bone marrow - granulocytes - human original cells - lymphocytes - lymphoid - mixed adherent suspension - mononuclear cells from bone marrow - peripheral blood components nos - peripheral blood nos - peripheral whole blood - pleural effusion - saliva - solid tissue - sorted cells - unknown - whole bone marrow - name: Preservation Method field: cases.samples.preservation_method values: - cryopreserved - edta - ffpe - fresh - frozen - oct - snap frozen - unknown - name: Tumor Descriptor field: cases.samples.tumor_descriptor values: - metastatic - new primary - not applicable - not reported - premalignant - primary - recurrence - unknown - xenograft - name: Analyte Type field: cases.samples.portions.analytes.aliquots.analyte_type values: - cfdna - dna - ffpe dna - ffpe rna - nuclei rna - rna - total rna - name: Available Data cards: - name: Data Category field: files.data_category values: - biospecimen - clinical - combined nucleotide variation - copy number variation - dna methylation - proteome profiling - sequencing reads - simple nucleotide variation - somatic structural variation - structural variation - transcriptome profiling - name: Data Type field: files.data_type values: - Aggregated Somatic Mutation - Aligned Reads - Allele-specific Copy Number Segment - Annotated Somatic Mutation - Biospecimen Supplement - Clinical Supplement - Copy Number Segment - Differential Gene Expression - Gene Expression Quantification - Gene Level Copy Number - Intermediate Analysis Archive - Isoform Expression Quantification - Masked Copy Number Segment - Masked Intensities - Masked Somatic Mutation - Methylation Beta Value - miRNA Expression Quantification - Pathology Report - Protein Expression Quantification - Raw CGI Variant - Raw Intensities - Raw Simple Somatic Mutation - Simple Germline Variation - Single Cell Analysis - Slide Image - Splice Junction Quantification - Structural Rearrangement - Tissue Microarray Image - Transcript Fusion - name: Experimental Strategy field: files.experimental_strategy values: - ATAC-Seq - Diagnostic Slide - Expression Array - Genotyping Array - Methylation Array - miRNA-Seq - Reverse Phase Protein Array - RNA-Seq - scRNA-Seq - Targeted Sequencing - Tissue Slide - WGS - WXS - name: Workflow Type field: files.analysis.workflow_type values: - ABSOLUTE LiftOver - Aliquot Ensemble Somatic Variant Merging and Masking - Arriba - ASCAT2 - ASCAT3 - AscatNGS - BCGSC miRNA Profiling - Birdseed - BRASS - BWA - BWA with BQSR - BWA with Mark Duplicates and BQSR - BWA-aln - CaVEMan - CellRanger - 10x Chromium - CellRanger - 10x Filtered Counts - CellRanger - 10x Raw Counts - DNAcopy - FM Simple Somatic Mutation - FoundationOne Annotation - FoundationOne Variant Aggregation and Masking - GATK4 CNV - GATK4 MuTect2 - GATK4 MuTect2 Annotation - GATK4 MuTect2 Tumor-Only - GATK4 MuTect2 Tumor-Only Annotation - Manta - MuSE - MuSE Annotation - MuTect2 - MuTect2 Annotation - Pindel - Pindel Annotation - SeSAMe Methylation Beta Estimation - Seurat - 10x Chromium - STAR - Counts - STAR 2-Pass Chimeric - STAR 2-Pass Genome - STAR 2-Pass Transcriptome - STAR-Fusion - SvABA - SvABA Indel - SvABA Indel Annotation - Tumor-Only Somatic Variant Merging and Masking - VarScan2 - VarScan2 Annotation - VCF LiftOver - name: Data Format field: files.data_format values: - bam - bcr auxiliary xml - bcr biotab - bcr omf xml - bcr pps xml - bcr ssf xml - bcr xml - bedpe - cdc json - cel - hdf5 - idat - jpeg 2000 - maf - mex - pdf - svs - tar - tsv - txt - vcf - xlsx - name: Platform field: files.platform values: - affymetrix snp 6.0 - complete genomics - genechip u133 plus 2.0 - genechip u133a - illumina - illumina human methylation 27 - illumina human methylation 450 - illumina methylation epic - illumina methylation epic v2 - rppa - name: Access field: files.access values: - controlled - open