Daily Papers

Machine learning-based interatomic potentials and force fields depend critically on accurate atomic structures, yet such data are scarce due to the limited availability of experimentally resolved crystals. Although atomic-resolution electron microscopy offers a potential source of structural data, converting these images into simulation-ready formats remains labor-intensive and error-prone, creating a bottleneck for model training and validation. We introduce AutoMat, an end-to-end, agent-assisted pipeline that automatically transforms scanning transmission electron microscopy (STEM) images into atomic crystal structures and predicts their physical properties. AutoMat combines pattern-adaptive denoising, physics-guided template retrieval, symmetry-aware atomic reconstruction, fast relaxation and property prediction via MatterSim, and coordinated orchestration across all stages. We propose the first dedicated STEM2Mat-Bench for this task and evaluate performance using lattice RMSD, formation energy MAE, and structure-matching success rate. By orchestrating external tool calls, AutoMat enables a text-only LLM to outperform vision-language models in this domain, achieving closed-loop reasoning throughout the pipeline. In large-scale experiments over 450 structure samples, AutoMat substantially outperforms existing multimodal large language models and tools. These results validate both AutoMat and STEM2Mat-Bench, marking a key step toward bridging microscopy and atomistic simulation in materials science.The code and dataset are publicly available at https://github.com/yyt-2378/AutoMat and https://huggingface.co/datasets/yaotianvector/STEM2Mat.

The reliability with Machine Learning (ML) techniques in novel materials discovery often depend on the quality of the dataset, in addition to the relevant features used in describing the material. In this regard, the current study presents and validates a newly processed materials dataset that can be utilized for benchmark ML analysis, as it relates to the prediction and classification of deterministic target properties. Originally, the dataset was extracted from the Open Quantum Materials Database (OQMD) and contains a robust 16,323 samples of ABX3 inorganic perovskite structures. The dataset is tabular in form and is preprocessed to include sixty-one generalized input features that broadly describes the physicochemical, stability/geometrical, and Density Functional Theory (DFT) target properties associated with the elemental ionic sites in a three-dimensional ABX3 polyhedral. For validation, four different ML models are employed to predict three distinctive target properties, namely: formation energy, energy band gap, and crystal system. On experimentation, the best accuracy measurements are reported at 0.013 eV/atom MAE, 0.216 eV MAE, and 85% F1, corresponding to the formation energy prediction, band gap prediction and crystal system multi-classification, respectively. Moreover, the realized results are compared with previous literature and as such, affirms the resourcefulness of the current dataset for future benchmark materials analysis via ML techniques. The preprocessed dataset and source codes are openly available to download from github.com/chenebuah/ML_abx3_dataset.

Morphology of nova ejecta is essential for fully understanding the physical processes involved in nova eruptions. We studied the 3D morphology of the expanding ejecta of the extremely slow nova V1280 Sco with a unique light curve. Synthetic line profile spectra were compared to the observed [O III] 4959, 5007 and [N II] 5755 emission line profiles in order to find the best-fit morphology, inclination angle, and maximum expansion velocity of the ejected shell. We derive the best fitting expansion velocity, inclination, and squeeze as V_{rm exp} = 2100^{+100}_{-100} \,km\,s^{-1}, i = 80^{+1}_{-3} deg, and squ = 1.0^{+0.0}_{-0.1} using [O III] line profiles, and V_{rm exp} = 1600^{+100}_{-100} \,km\,s^{-1}, i = 81^{+2}_{-4} deg, and squ = 1.0^{+0.0}_{-0.1} using [N II] 5755 line profile. A high inclination angle is consistent with the observational results showing multiple absorption lines originating from clumpy gases which are produced in dense and slow equatorially focused outflows. Based on additional observational features such as optical flares near the maximum light and dust formation on V1280 Sco, a model of internal shock interaction between slow ejecta and fast wind proposed for the γ-ray emission detected in other novae seems to be applicable to this extremely slow and peculiar nova. Increasing the sample size of novae whose morphology is studied will be helpful in addressing long-standing mysteries in novae such as the dominant energy source to power the optical light at the maximum, optical flares near the maximum, clumpiness of the ejecta, and dust formation.