mevol
/

BiomedNLP-PubMedBERT-ProteinStructure-NER-v2.1_quantized

Token Classification

protein structure

token classification

Eval Results (legacy)

Model card Files Files and versions

mevol commited on Mar 24, 2025

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@@ -69,4 +69,11 @@ model-index:
 | "site" | 0.86 | 0.89 | 0.88 | 247 |
 | "species" | 0.95 | 0.97 | 0.96 | 76 |
 | "structure_element" | 0.90 | 0.92 | 0.91 | 749 |
-| "taxonomy_domain" | 0.99 | 0.98 | 0.98 | 82 |

 | "site" | 0.86 | 0.89 | 0.88 | 247 |
 | "species" | 0.95 | 0.97 | 0.96 | 76 |
 | "structure_element" | 0.90 | 0.92 | 0.91 | 749 |
+| "taxonomy_domain" | 0.99 | 0.98 | 0.98 | 82 |
+### Citation
+Vollmar, M., Tirunagari, S., Harrus, D. et al.
+Dataset from a human-in-the-loop approach to identify functionally important protein residues from literature.
+Sci Data 11, 1032
+2024
+https://doi.org/10.1038/s41597-024-03841-9