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.gitattributes CHANGED
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  *.jpeg filter=lfs diff=lfs merge=lfs -text
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  *.webp filter=lfs diff=lfs merge=lfs -text
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56
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57
+ demographics.csv filter=lfs diff=lfs merge=lfs -text
58
+ dietary.csv filter=lfs diff=lfs merge=lfs -text
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+ medications.csv filter=lfs diff=lfs merge=lfs -text
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+ mortality.csv filter=lfs diff=lfs merge=lfs -text
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+ nhanes_inconsistencies_documentation.xlsx filter=lfs diff=lfs merge=lfs -text
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+ occupation.csv filter=lfs diff=lfs merge=lfs -text
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+ questionnaire.csv filter=lfs diff=lfs merge=lfs -text
64
+ response.csv filter=lfs diff=lfs merge=lfs -text
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+ w[[:space:]]-[[:space:]]nhanes_1988_2018.RData filter=lfs diff=lfs merge=lfs -text
66
+ weights.csv filter=lfs diff=lfs merge=lfs -text
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dictionary_drug_codes.csv ADDED
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1
+ "","variable_codename_use","variable_description_use","harmonized_categories","harmonized_categories_description","in_dataset","corrected_codename_2day_separate"
2
+ "1","DMDBORN4","In what country {were you/was SP} born?","1","Born in 50 US states or Washington, DC","Demographics",NA
3
+ "2","DMDBORN4","In what country {were you/was SP} born?","2","Others","Demographics",NA
4
+ "3","DMDBORN4","In what country {were you/was SP} born?","77","Refused","Demographics",NA
5
+ "4","DMDBORN4","In what country {were you/was SP} born?","99","Don't Know","Demographics",NA
6
+ "5","DMDEDUC2","Education level - Adults 20+","1","Less Than 9th Grade","Demographics",NA
7
+ "6","DMDEDUC2","Education level - Adults 20+","2","9-11th Grade (Includes 12th grade with no diploma)","Demographics",NA
8
+ "7","DMDEDUC2","Education level - Adults 20+","3","High School Grad/GED or Equivalent","Demographics",NA
9
+ "8","DMDEDUC2","Education level - Adults 20+","4","Some College or AA degree","Demographics",NA
10
+ "9","DMDEDUC2","Education level - Adults 20+","5","College Graduate or above","Demographics",NA
11
+ "10","DMDEDUC2","Education level - Adults 20+","7","Refused","Demographics",NA
12
+ "11","DMDEDUC2","Education level - Adults 20+","9","Don't know","Demographics",NA
13
+ "12","DMDEDUC3","Education level - Children/Youth 6-19","0","Never Attended / Kindergarten Only","Demographics",NA
14
+ "13","DMDEDUC3","Education level - Children/Youth 6-19","1","1st Grade","Demographics",NA
15
+ "14","DMDEDUC3","Education level - Children/Youth 6-19","2","2nd Grade","Demographics",NA
16
+ "15","DMDEDUC3","Education level - Children/Youth 6-19","3","3rd Grade","Demographics",NA
17
+ "16","DMDEDUC3","Education level - Children/Youth 6-19","4","4th Grade","Demographics",NA
18
+ "17","DMDEDUC3","Education level - Children/Youth 6-19","5","5th Grade","Demographics",NA
19
+ "18","DMDEDUC3","Education level - Children/Youth 6-19","6","6th Grade","Demographics",NA
20
+ "19","DMDEDUC3","Education level - Children/Youth 6-19","7","7th Grade","Demographics",NA
21
+ "20","DMDEDUC3","Education level - Children/Youth 6-19","8","8th Grade","Demographics",NA
22
+ "21","DMDEDUC3","Education level - Children/Youth 6-19","9","9th Grade","Demographics",NA
23
+ "22","DMDEDUC3","Education level - Children/Youth 6-19","10","10th Grade","Demographics",NA
24
+ "23","DMDEDUC3","Education level - Children/Youth 6-19","11","11th Grade","Demographics",NA
25
+ "24","DMDEDUC3","Education level - Children/Youth 6-19","12","12th Grade, No Diploma","Demographics",NA
26
+ "25","DMDEDUC3","Education level - Children/Youth 6-19","13","High School Graduate","Demographics",NA
27
+ "26","DMDEDUC3","Education level - Children/Youth 6-19","14","GED or Equivalent","Demographics",NA
28
+ "27","DMDEDUC3","Education level - Children/Youth 6-19","15","More than high school","Demographics",NA
29
+ "28","DMDEDUC3","Education level - Children/Youth 6-19","55","Less Than 5th Grade","Demographics",NA
30
+ "29","DMDEDUC3","Education level - Children/Youth 6-19","66","Less Than 9th Grade","Demographics",NA
31
+ "30","DMDEDUC3","Education level - Children/Youth 6-19","77","Refused","Demographics",NA
32
+ "31","DMDEDUC3","Education level - Children/Youth 6-19","99","Don't know","Demographics",NA
33
+ "32","DMDFMSIZ","Total number of people in the Family","1","1","Demographics",NA
34
+ "33","DMDFMSIZ","Total number of people in the Family","2","2","Demographics",NA
35
+ "34","DMDFMSIZ","Total number of people in the Family","3","3","Demographics",NA
36
+ "35","DMDFMSIZ","Total number of people in the Family","4","4","Demographics",NA
37
+ "36","DMDFMSIZ","Total number of people in the Family","5","5","Demographics",NA
38
+ "37","DMDFMSIZ","Total number of people in the Family","6","6","Demographics",NA
39
+ "38","DMDFMSIZ","Total number of people in the Family","7","7 or more people in the Family","Demographics",NA
40
+ "39","DMDHHSIZ","Total number of people in the Household","1","1","Demographics",NA
41
+ "40","DMDHHSIZ","Total number of people in the Household","2","2","Demographics",NA
42
+ "41","DMDHHSIZ","Total number of people in the Household","3","3","Demographics",NA
43
+ "42","DMDHHSIZ","Total number of people in the Household","4","4","Demographics",NA
44
+ "43","DMDHHSIZ","Total number of people in the Household","5","5","Demographics",NA
45
+ "44","DMDHHSIZ","Total number of people in the Household","6","6","Demographics",NA
46
+ "45","DMDHHSIZ","Total number of people in the Household","7","7 or more people in the Household","Demographics",NA
47
+ "46","DMDHRAGE","Age in years of the household reference person at the time of HH screening.","1","<20 years","Demographics",NA
48
+ "47","DMDHRAGE","Age in years of the household reference person at the time of HH screening.","2","20-39 years","Demographics",NA
49
+ "48","DMDHRAGE","Age in years of the household reference person at the time of HH screening.","3","40-59 years","Demographics",NA
50
+ "49","DMDHRAGE","Age in years of the household reference person at the time of HH screening.","4","60+ years","Demographics",NA
51
+ "50","DMDYRSUS","Length of time the participant has been in the US.","1","Less than 1 year","Demographics",NA
52
+ "51","DMDYRSUS","Length of time the participant has been in the US.","2","1 yr., less than 5 yrs.","Demographics",NA
53
+ "52","DMDYRSUS","Length of time the participant has been in the US.","3","5 yrs., less than 10 yrs.","Demographics",NA
54
+ "53","DMDYRSUS","Length of time the participant has been in the US.","4","10 yrs., less than 15 yrs.","Demographics",NA
55
+ "54","DMDHRBR4","HH reference person's country of birth","1","Born in 50 US states or Washington, DC","Demographics",NA
56
+ "55","DMDHRBR4","HH reference person's country of birth","2","Others","Demographics",NA
57
+ "56","DMDHRBR4","HH reference person's country of birth","77","Refused","Demographics",NA
58
+ "57","DMDHRBR4","HH reference person's country of birth","99","Don't Know","Demographics",NA
59
+ "58","DMDHREDU","HH reference person's education level","1","Less than high school degree","Demographics",NA
60
+ "59","DMDHREDU","HH reference person's education level","2","High school grad/GED or some college/AA degree","Demographics",NA
61
+ "60","DMDHREDU","HH reference person's education level","3","College graduate or above","Demographics",NA
62
+ "61","DMDHREDU","HH reference person's education level","7","Refused","Demographics",NA
63
+ "62","DMDHREDU","HH reference person's education level","9","Don't know","Demographics",NA
64
+ "63","DMDHREDU","HH reference person's education level","9","Don't Know","Demographics",NA
65
+ "64","DMDHREDU","HH reference person's education level","3","High school grad/GED or some college/AA degree","Demographics",NA
66
+ "65","DMDHRGND","Gender of the household reference person","1","Male","Demographics",NA
67
+ "66","DMDHRGND","Gender of the household reference person","2","Female","Demographics",NA
68
+ "67","DMDHRMAR","Marital Status of household reference person","1","Married/Living with partner","Demographics",NA
69
+ "68","DMDHRMAR","Marital Status of household reference person","2","Widowed/Divorced/Separated","Demographics",NA
70
+ "69","DMDHRMAR","Marital Status of household reference person","3","Never Married","Demographics",NA
71
+ "70","DMDHRMAR","Marital Status of household reference person","77","Refused","Demographics",NA
72
+ "71","DMDHRMAR","Marital Status of household reference person","99","Don't Know","Demographics",NA
73
+ "72","DMDHSEDU","HH reference person's spouse's education level","1","Less than high school degree","Demographics",NA
74
+ "73","DMDHSEDU","HH reference person's spouse's education level","2","High school grad/GED or some college/AA degree","Demographics",NA
75
+ "74","DMDHSEDU","HH reference person's spouse's education level","3","College graduate or above","Demographics",NA
76
+ "75","DMDHSEDU","HH reference person's spouse's education level","7","Refused","Demographics",NA
77
+ "76","DMDHSEDU","HH reference person's spouse's education level","9","Don't Know","Demographics",NA
78
+ "77","DMDMARTL","Marital status","1","Married","Demographics",NA
79
+ "78","DMDMARTL","Marital status","2","Widowed","Demographics",NA
80
+ "79","DMDMARTL","Marital status","3","Divorced","Demographics",NA
81
+ "80","DMDMARTL","Marital status","4","Separated","Demographics",NA
82
+ "81","DMDMARTL","Marital status","5","Never married","Demographics",NA
83
+ "82","DMDMARTL","Marital status","6","Living with partner","Demographics",NA
84
+ "83","DMDMARTL","Marital status","77","Refused","Demographics",NA
85
+ "84","DMDMARTL","Marital status","99","Don't know","Demographics",NA
86
+ "85","DMDYRSUS","Length of time the participant has been in the US.","5","15 yrs., less than 20 yrs.","Demographics",NA
87
+ "86","DMDYRSUS","Length of time the participant has been in the US.","6","20 yrs., less than 30 yrs.","Demographics",NA
88
+ "87","DMDYRSUS","Length of time the participant has been in the US.","7","30 yrs., less than 40 yrs.","Demographics",NA
89
+ "88","DMDYRSUS","Length of time the participant has been in the US.","8","40 yrs., less than 50 yrs.","Demographics",NA
90
+ "89","DMDYRSUS","Length of time the participant has been in the US.","9","50 years or more","Demographics",NA
91
+ "90","DMDYRSUS","Length of time the participant has been in the US.","77","Refused","Demographics",NA
92
+ "91","DMDYRSUS","Length of time the participant has been in the US.","99","Don't know","Demographics",NA
93
+ "92","FIALANG","Language of the Family Interview Instrument","1","English","Demographics",NA
94
+ "93","FIALANG","Language of the Family Interview Instrument","2","Spanish","Demographics",NA
95
+ "94","FIALANG","Language of the Family Interview Instrument","3","Other","Demographics",NA
96
+ "95","INDFMIN2","Total family income (reported as a range value in dollars)","1","$ 0 to $ 4,999","Demographics",NA
97
+ "96","INDFMIN2","Total family income (reported as a range value in dollars)","2","$ 5,000 to $ 9,999","Demographics",NA
98
+ "97","INDFMIN2","Total family income (reported as a range value in dollars)","3","$10,000 to $14,999","Demographics",NA
99
+ "98","INDFMIN2","Total family income (reported as a range value in dollars)","4","$15,000 to $19,999","Demographics",NA
100
+ "99","INDFMIN2","Total family income (reported as a range value in dollars)","5","$20,000 to $24,999","Demographics",NA
101
+ "100","INDFMIN2","Total family income (reported as a range value in dollars)","6","$25,000 to $34,999","Demographics",NA
102
+ "101","INDFMIN2","Total family income (reported as a range value in dollars)","7","$35,000 to $44,999","Demographics",NA
103
+ "102","INDFMIN2","Total family income (reported as a range value in dollars)","8","$45,000 to $54,999","Demographics",NA
104
+ "103","INDFMIN2","Total family income (reported as a range value in dollars)","16","$50,000 and over","Demographics",NA
105
+ "104","INDFMIN2","Total family income (reported as a range value in dollars)","99","Don't know","Demographics",NA
106
+ "105","INDFMIN2","Total family income (reported as a range value in dollars)","9","$55,000 to $64,999","Demographics",NA
107
+ "106","INDFMIN2","Total family income (reported as a range value in dollars)","10","$65,000 to $74,999","Demographics",NA
108
+ "107","INDFMIN2","Total family income (reported as a range value in dollars)","12","$20,000 and Over","Demographics",NA
109
+ "108","INDFMIN2","Total family income (reported as a range value in dollars)","13","Under $20,000","Demographics",NA
110
+ "109","INDFMIN2","Total family income (reported as a range value in dollars)","14","$75,000 to $99,999","Demographics",NA
111
+ "110","INDFMIN2","Total family income (reported as a range value in dollars)","15","$100,000 and Over","Demographics",NA
112
+ "111","INDFMIN2","Total family income (reported as a range value in dollars)","77","Refused","Demographics",NA
113
+ "112","INDFMIN2","Total family income (reported as a range value in dollars)","11","$75,000 and Over","Demographics",NA
114
+ "113","RIDRETH1","Recode of reported race and Hispanic origin information","1","Mexican American","Demographics",NA
115
+ "114","RIDRETH1","Recode of reported race and Hispanic origin information","3","Non-Hispanic White","Demographics",NA
116
+ "115","RIDRETH1","Recode of reported race and Hispanic origin information","4","Non-Hispanic Black","Demographics",NA
117
+ "116","RIDRETH1","Recode of reported race and Hispanic origin information","5","Other Race - Including Multi-Racial","Demographics",NA
118
+ "117","RIDRETH1","Recode of reported race and Hispanic origin information","2","Other Hispanic","Demographics",NA
119
+ "118","RIDSTATR","Interview and Examination Status of the Sample Person.","1","Interviewed Only","Demographics",NA
120
+ "119","RIDSTATR","Interview and Examination Status of the Sample Person.","2","Both Interviewed and MEC examined","Demographics",NA
121
+ "120","MCD180B","Age when told you had congestive heart failure","16","16 years or younger","Questionnaire",NA
122
+ "121","MCD180B","Age when told you had congestive heart failure","17-79","17-79 years old","Questionnaire",NA
123
+ "122","MCD180B","Age when told you had congestive heart failure","17-84","17-84 years old","Questionnaire",NA
124
+ "123","MCD180B","Age when told you had congestive heart failure","17-89","17-89 years old","Questionnaire",NA
125
+ "124","MCD180B","Age when told you had congestive heart failure","18-79","18-79 years old","Questionnaire",NA
126
+ "125","MCD180B","Age when told you had congestive heart failure","80","80 years or older","Questionnaire",NA
127
+ "126","MCD180B","Age when told you had congestive heart failure","85","85 years or older","Questionnaire",NA
128
+ "127","MCD180B","Age when told you had congestive heart failure","90","90 + years","Questionnaire",NA
129
+ "128","MCD180B","Age when told you had congestive heart failure","99999","Don't know","Questionnaire",NA
130
+ "129","MCD180B","Age when told you had congestive heart failure","77777","Refused","Questionnaire",NA
131
+ "130","MCD180C","Age when told had coronary heart disease","16","16 years or younger","Questionnaire",NA
132
+ "131","MCD180C","Age when told had coronary heart disease","17-79","17-79 years old","Questionnaire",NA
133
+ "132","MCD180C","Age when told had coronary heart disease","17-84","17-84 years old","Questionnaire",NA
134
+ "133","MCD180C","Age when told had coronary heart disease","20-79","20-79 years old","Questionnaire",NA
135
+ "134","MCD180C","Age when told had coronary heart disease","80","80 years or older","Questionnaire",NA
136
+ "135","MCD180C","Age when told had coronary heart disease","85","85 years or older","Questionnaire",NA
137
+ "136","MCD180C","Age when told had coronary heart disease","99999","Don't know","Questionnaire",NA
138
+ "137","MCD180C","Age when told had coronary heart disease","77777","Refused","Questionnaire",NA
139
+ "138","MCD180D","Age when told you had angina pectoris","16","16 years or younger","Questionnaire",NA
140
+ "139","MCD180D","Age when told you had angina pectoris","17-84","17-84 years old","Questionnaire",NA
141
+ "140","MCD180D","Age when told you had angina pectoris","85","85 years or older","Questionnaire",NA
142
+ "141","MCD180D","Age when told you had angina pectoris","99999","Don't know","Questionnaire",NA
143
+ "142","MCD180D","Age when told you had angina pectoris","77777","Refused","Questionnaire",NA
144
+ "143","MCD180D","Age when told you had angina pectoris","17-79","17-79 years old","Questionnaire",NA
145
+ "144","MCD180D","Age when told you had angina pectoris","20-79","20-79 years old","Questionnaire",NA
146
+ "145","MCD180D","Age when told you had angina pectoris","80","80 years or older","Questionnaire",NA
147
+ "146","MCD180E","Age when told you had heart attack","16","16 years or younger","Questionnaire",NA
148
+ "147","MCD180E","Age when told you had heart attack","17-79","17-79 years old","Questionnaire",NA
149
+ "148","MCD180E","Age when told you had heart attack","17-84","17-84 years old","Questionnaire",NA
150
+ "149","MCD180E","Age when told you had heart attack","17-88","17-88 years old","Questionnaire",NA
151
+ "150","MCD180E","Age when told you had heart attack","19-79","19-79 years old","Questionnaire",NA
152
+ "151","MCD180E","Age when told you had heart attack","80","80 years or older","Questionnaire",NA
153
+ "152","MCD180E","Age when told you had heart attack","85","85 years or older","Questionnaire",NA
154
+ "153","MCD180E","Age when told you had heart attack","90","90 + years","Questionnaire",NA
155
+ "154","MCD180E","Age when told you had heart attack","99999","Don't know","Questionnaire",NA
156
+ "155","MCD180E","Age when told you had heart attack","77777","Refused","Questionnaire",NA
157
+ "156","MCD180F","Age when told you had a stroke","16","16 years or younger","Questionnaire",NA
158
+ "157","MCD180F","Age when told you had a stroke","17-79","17-79 years old","Questionnaire",NA
159
+ "158","MCD180F","Age when told you had a stroke","17-84","17-84 years old","Questionnaire",NA
160
+ "159","MCD180F","Age when told you had a stroke","17-89","17-89 years old","Questionnaire",NA
161
+ "160","MCD180F","Age when told you had a stroke","80","80 years or older","Questionnaire",NA
162
+ "161","MCD180F","Age when told you had a stroke","85","85 years or older","Questionnaire",NA
163
+ "162","MCD180F","Age when told you had a stroke","90","90 + years","Questionnaire",NA
164
+ "163","MCD180F","Age when told you had a stroke","99999","Don't know","Questionnaire",NA
165
+ "164","MCD180F","Age when told you had a stroke","77777","Refused","Questionnaire",NA
166
+ "165","MCD180G","Age when told you had emphysema","16","16 years or younger","Questionnaire",NA
167
+ "166","MCD180G","Age when told you had emphysema","17-79","17-79 years old","Questionnaire",NA
168
+ "167","MCD180G","Age when told you had emphysema","17-84","17-84 years old","Questionnaire",NA
169
+ "168","MCD180G","Age when told you had emphysema","17-89","17-89 years old","Questionnaire",NA
170
+ "169","MCD180G","Age when told you had emphysema","80","80 years or older","Questionnaire",NA
171
+ "170","MCD180G","Age when told you had emphysema","85","85 years or older","Questionnaire",NA
172
+ "171","MCD180G","Age when told you had emphysema","90","90 + years","Questionnaire",NA
173
+ "172","MCD180G","Age when told you had emphysema","99999","Don't know","Questionnaire",NA
174
+ "173","MCD180G","Age when told you had emphysema","77777","Refused","Questionnaire",NA
175
+ "174","MCD180K","Age when told you had chronic bronchitis","16","16 years or younger","Questionnaire",NA
176
+ "175","MCD180K","Age when told you had chronic bronchitis","17-79","17-79 years old","Questionnaire",NA
177
+ "176","MCD180K","Age when told you had chronic bronchitis","17-83","17-83 years old","Questionnaire",NA
178
+ "177","MCD180K","Age when told you had chronic bronchitis","17-89","17-89 years old","Questionnaire",NA
179
+ "178","MCD180K","Age when told you had chronic bronchitis","80","80 years or older","Questionnaire",NA
180
+ "179","MCD180K","Age when told you had chronic bronchitis","85","85 years or older","Questionnaire",NA
181
+ "180","MCD180K","Age when told you had chronic bronchitis","90","90 + years","Questionnaire",NA
182
+ "181","MCD180K","Age when told you had chronic bronchitis","99999","Don't know","Questionnaire",NA
183
+ "182","MCD180K","Age when told you had chronic bronchitis","77777","Refused","Questionnaire",NA
184
+ "183","MCD180L","Age when told you had a liver condition","16","16 years or younger","Questionnaire",NA
185
+ "184","MCD180L","Age when told you had a liver condition","17-78","17-78 years old","Questionnaire",NA
186
+ "185","MCD180L","Age when told you had a liver condition","17-79","17-79 years old","Questionnaire",NA
187
+ "186","MCD180L","Age when told you had a liver condition","17-83","17-83 years old","Questionnaire",NA
188
+ "187","MCD180L","Age when told you had a liver condition","80","80 years or older","Questionnaire",NA
189
+ "188","MCD180L","Age when told you had a liver condition","85","85 years or older","Questionnaire",NA
190
+ "189","MCD180L","Age when told you had a liver condition","99999","Don't know","Questionnaire",NA
191
+ "190","MCD180L","Age when told you had a liver condition","77777","Refused","Questionnaire",NA
192
+ "191","MCQ180H","Age when told you had a goiter","16","16 years or younger","Questionnaire",NA
193
+ "192","MCQ180H","Age when told you had a goiter","17-84","17-84 years old","Questionnaire",NA
194
+ "193","MCQ180H","Age when told you had a goiter","90","90 + years","Questionnaire",NA
195
+ "194","MCQ180H","Age when told you had a goiter","99999","Don't know","Questionnaire",NA
196
+ "195","MCD180M","Age when told you had thyroid problem","17-89","17-89 years old","Questionnaire",NA
197
+ "196","MCD180M","Age when told you had thyroid problem","16","16 years or younger","Questionnaire",NA
198
+ "197","MCD180M","Age when told you had thyroid problem","99999","Don't know","Questionnaire",NA
199
+ "198","MCD180M","Age when told you had thyroid problem","17-84","17-84 years old","Questionnaire",NA
200
+ "199","MCD180M","Age when told you had thyroid problem","80","80 years or older","Questionnaire",NA
201
+ "200","MCD180M","Age when told you had thyroid problem","85","85 years or older","Questionnaire",NA
202
+ "201","MCD180M","Age when told you had thyroid problem","77777","Refused","Questionnaire",NA
203
+ "202","MCD180M","Age when told you had thyroid problem","17-79","17-79 years old","Questionnaire",NA
204
+ "203","MCD180N","Age when told you had gout","16","16 years or younger","Questionnaire",NA
205
+ "204","MCD180N","Age when told you had gout","17-79","17-79 years old","Questionnaire",NA
206
+ "205","MCD180N","Age when told you had gout","17-86","17-86 years old","Questionnaire",NA
207
+ "206","MCD180N","Age when told you had gout","80","80 years or older","Questionnaire",NA
208
+ "207","MCD180N","Age when told you had gout","99999","Don't know","Questionnaire",NA
209
+ "208","MCD180N","Age when told you had gout","77777","Refused","Questionnaire",NA
210
+ "209","MCQ025","Age when first had asthma","1-19","1-19 years old","Questionnaire",NA
211
+ "210","MCQ025","Age when first had asthma","1-79","1-79 years old","Questionnaire",NA
212
+ "211","MCQ025","Age when first had asthma","1-84","1-84 years old","Questionnaire",NA
213
+ "212","MCQ025","Age when first had asthma","1-88","1-88 years old","Questionnaire",NA
214
+ "213","MCQ025","Age when first had asthma","80","80 years or older","Questionnaire",NA
215
+ "214","MCQ025","Age when first had asthma","85","85 years or older","Questionnaire",NA
216
+ "215","MCQ025","Age when first had asthma","99999","Don't know","Questionnaire",NA
217
+ "216","MCQ025","Age when first had asthma","1","Less than 1 year","Questionnaire",NA
218
+ "217","MCQ025","Age when first had asthma","77777","Refused","Questionnaire",NA
219
+ "218","MCD180A","Age when told you had arthritis","16","16 years or younger","Questionnaire",NA
220
+ "219","MCD180A","Age when told you had arthritis","17-89","17-89 years old","Questionnaire",NA
221
+ "220","MCD180A","Age when told you had arthritis","90","90 + years","Questionnaire",NA
222
+ "221","MCD180A","Age when told you had arthritis","99999","Don't know","Questionnaire",NA
223
+ "222","MCD180A","Age when told you had arthritis","17-79","17-79 years old","Questionnaire",NA
224
+ "223","MCD180A","Age when told you had arthritis","80","80 years or older","Questionnaire",NA
225
+ "224","MCD180A","Age when told you had arthritis","77777","Refused","Questionnaire",NA
226
+ "225","MCD180A","Age when told you had arthritis","17-84","17-84 years old","Questionnaire",NA
227
+ "226","MCD180A","Age when told you had arthritis","85","85 years or older","Questionnaire",NA
228
+ "227","MCQ180H","Age when told you had a goiter","17-72","17-72 years old","Questionnaire",NA
229
+ "228","MCQ180H","Age when told you had a goiter","85","85 years or older","Questionnaire",NA
230
+ "229","MCQ180H","Age when told you had a goiter","77777","Refused","Questionnaire",NA
231
+ "230","MCQ195","Which type of arthritis was it","9","Don't know","Questionnaire",NA
232
+ "231","MCQ195","Which type of arthritis was it","2","Osteoarthritis or degenerative arthritis","Questionnaire",NA
233
+ "232","MCQ195","Which type of arthritis was it","4","Other","Questionnaire",NA
234
+ "233","MCQ195","Which type of arthritis was it","3","Psoriatic arthritis","Questionnaire",NA
235
+ "234","MCQ195","Which type of arthritis was it","7","Refused","Questionnaire",NA
236
+ "235","MCQ195","Which type of arthritis was it","1","Rheumatoid arthritis","Questionnaire",NA
237
+ "236","MCQ240A","Age when bladder cancer first diagnosed","17-78","17-78 years old","Questionnaire",NA
238
+ "237","MCQ240A","Age when bladder cancer first diagnosed","17-83","17-83 years old","Questionnaire",NA
239
+ "238","MCQ240A","Age when bladder cancer first diagnosed","16","16 years or younger","Questionnaire",NA
240
+ "239","MCQ240A","Age when bladder cancer first diagnosed","80","80 years or older","Questionnaire",NA
241
+ "240","MCQ240A","Age when bladder cancer first diagnosed","85","85 years or older","Questionnaire",NA
242
+ "241","MCQ240A","Age when bladder cancer first diagnosed","99999","Don't know","Questionnaire",NA
243
+ "242","MCQ240A","Age when bladder cancer first diagnosed","77777","Refused","Questionnaire",NA
244
+ "243","MCQ240B","Age when blood cancer was first diagnosed","16","16 years or younger","Questionnaire",NA
245
+ "244","MCQ240B","Age when blood cancer was first diagnosed","17-66","17-66 years old","Questionnaire",NA
246
+ "245","MCQ240B","Age when blood cancer was first diagnosed","17-70","17-70 years old","Questionnaire",NA
247
+ "246","MCQ240B","Age when blood cancer was first diagnosed","80","80 years or older","Questionnaire",NA
248
+ "247","MCQ240B","Age when blood cancer was first diagnosed","85","85 years or older","Questionnaire",NA
249
+ "248","MCQ240B","Age when blood cancer was first diagnosed","99999","Don't know","Questionnaire",NA
250
+ "249","MCQ240B","Age when blood cancer was first diagnosed","77777","Refused","Questionnaire",NA
251
+ "250","MCQ240C","Age when bone cancer was first diagnosed","17-77","17-77 years old","Questionnaire",NA
252
+ "251","MCQ240C","Age when bone cancer was first diagnosed","17-84","17-84 years old","Questionnaire",NA
253
+ "252","MCQ240C","Age when bone cancer was first diagnosed","16","16 years or younger","Questionnaire",NA
254
+ "253","MCQ240C","Age when bone cancer was first diagnosed","55-76","55-76 years old","Questionnaire",NA
255
+ "254","MCQ240C","Age when bone cancer was first diagnosed","80","80 years or older","Questionnaire",NA
256
+ "255","MCQ240C","Age when bone cancer was first diagnosed","85","85 years or older","Questionnaire",NA
257
+ "256","MCQ240C","Age when bone cancer was first diagnosed","99999","Don't know","Questionnaire",NA
258
+ "257","MCQ240C","Age when bone cancer was first diagnosed","77777","Refused","Questionnaire",NA
259
+ "258","MCQ240CC","Age when uterine cancer was first diagnosed","16","16 years or younger","Questionnaire",NA
260
+ "259","MCQ240CC","Age when uterine cancer was first diagnosed","17-77","17-77 years old","Questionnaire",NA
261
+ "260","MCQ240CC","Age when uterine cancer was first diagnosed","17-84","17-84 years old","Questionnaire",NA
262
+ "261","MCQ240CC","Age when uterine cancer was first diagnosed","20-72","20-72 years old","Questionnaire",NA
263
+ "262","MCQ240CC","Age when uterine cancer was first diagnosed","80","80 years or older","Questionnaire",NA
264
+ "263","MCQ240CC","Age when uterine cancer was first diagnosed","85","85 years or older","Questionnaire",NA
265
+ "264","MCQ240CC","Age when uterine cancer was first diagnosed","99999","Don't know","Questionnaire",NA
266
+ "265","MCQ240CC","Age when uterine cancer was first diagnosed","77777","Refused","Questionnaire",NA
267
+ "266","MCQ240D","Age when brain cancer was first diagnosed","16","16 years or younger","Questionnaire",NA
268
+ "267","MCQ240D","Age when brain cancer was first diagnosed","17-73","17-73 years old","Questionnaire",NA
269
+ "268","MCQ240D","Age when brain cancer was first diagnosed","17-75","17-75 years old","Questionnaire",NA
270
+ "269","MCQ240D","Age when brain cancer was first diagnosed","80","80 years or older","Questionnaire",NA
271
+ "270","MCQ240D","Age when brain cancer was first diagnosed","85","85 years or older","Questionnaire",NA
272
+ "271","MCQ240D","Age when brain cancer was first diagnosed","99999","Don't know","Questionnaire",NA
273
+ "272","MCQ240D","Age when brain cancer was first diagnosed","77777","Refused","Questionnaire",NA
274
+ "273","MCQ240DD","Age when some other type of cancer was first diagnosed","16","16 years or younger","Questionnaire",NA
275
+ "274","MCQ240DD","Age when some other type of cancer was first diagnosed","17-77","17-77 years old","Questionnaire",NA
276
+ "275","MCQ240DD","Age when some other type of cancer was first diagnosed","17-78","17-78 years old","Questionnaire",NA
277
+ "276","MCQ240DD","Age when some other type of cancer was first diagnosed","17-83","17-83 years old","Questionnaire",NA
278
+ "277","MCQ240DD","Age when some other type of cancer was first diagnosed","80","80 years or older","Questionnaire",NA
279
+ "278","MCQ240DD","Age when some other type of cancer was first diagnosed","85","85 years or older","Questionnaire",NA
280
+ "279","MCQ240DD","Age when some other type of cancer was first diagnosed","99999","Don't know","Questionnaire",NA
281
+ "280","MCQ240DD","Age when some other type of cancer was first diagnosed","77777","Refused","Questionnaire",NA
282
+ "281","MCQ240DK","Age when cancer was first diagnosed","20-80","20-80 years old","Questionnaire",NA
283
+ "282","MCQ240DK","Age when cancer was first diagnosed","23-47","23-47 years old","Questionnaire",NA
284
+ "283","MCQ240DK","Age when cancer was first diagnosed","80","80 years or older","Questionnaire",NA
285
+ "284","MCQ240DK","Age when cancer was first diagnosed","85","85 years or older","Questionnaire",NA
286
+ "285","MCQ240DK","Age when cancer was first diagnosed","99999","Don't know","Questionnaire",NA
287
+ "286","MCQ240DK","Age when cancer was first diagnosed","77777","Refused","Questionnaire",NA
288
+ "287","MCQ240E","Age when breast cancer was first diagnosed","16","16 years or younger","Questionnaire",NA
289
+ "288","MCQ240E","Age when breast cancer was first diagnosed","17-78","17-78 years old","Questionnaire",NA
290
+ "289","MCQ240E","Age when breast cancer was first diagnosed","17-79","17-79 years old","Questionnaire",NA
291
+ "290","MCQ240E","Age when breast cancer was first diagnosed","17-84","17-84 years old","Questionnaire",NA
292
+ "291","MCQ240E","Age when breast cancer was first diagnosed","80","80 years or older","Questionnaire",NA
293
+ "292","MCQ240E","Age when breast cancer was first diagnosed","85","85 years or older","Questionnaire",NA
294
+ "293","MCQ240E","Age when breast cancer was first diagnosed","99999","Don't know","Questionnaire",NA
295
+ "294","MCQ240E","Age when breast cancer was first diagnosed","77777","Refused","Questionnaire",NA
296
+ "295","MCQ240F","Age when cervical cancer was first diagnosed","16","16 years or younger","Questionnaire",NA
297
+ "296","MCQ240F","Age when cervical cancer was first diagnosed","17-65","17-65 years old","Questionnaire",NA
298
+ "297","MCQ240F","Age when cervical cancer was first diagnosed","17-73","17-73 years old","Questionnaire",NA
299
+ "298","MCQ240F","Age when cervical cancer was first diagnosed","80","80 years or older","Questionnaire",NA
300
+ "299","MCQ240F","Age when cervical cancer was first diagnosed","85","85 years or older","Questionnaire",NA
301
+ "300","MCQ240F","Age when cervical cancer was first diagnosed","99999","Don't know","Questionnaire",NA
302
+ "301","MCQ240F","Age when cervical cancer was first diagnosed","77777","Refused","Questionnaire",NA
303
+ "302","MCQ240G","Age when colon cancer was first diagnosed","16","16 years or younger","Questionnaire",NA
304
+ "303","MCQ240G","Age when colon cancer was first diagnosed","17-79","17-79 years old","Questionnaire",NA
305
+ "304","MCQ240G","Age when colon cancer was first diagnosed","17-84","17-84 years old","Questionnaire",NA
306
+ "305","MCQ240G","Age when colon cancer was first diagnosed","21-79","21-79 years old","Questionnaire",NA
307
+ "306","MCQ240G","Age when colon cancer was first diagnosed","80","80 years or older","Questionnaire",NA
308
+ "307","MCQ240G","Age when colon cancer was first diagnosed","85","85 years or older","Questionnaire",NA
309
+ "308","MCQ240G","Age when colon cancer was first diagnosed","99999","Don't know","Questionnaire",NA
310
+ "309","MCQ240G","Age when colon cancer was first diagnosed","77777","Refused","Questionnaire",NA
311
+ "310","MCQ240L","Age when leukemia was first diagnosed","17-70","17-70 years old","Questionnaire",NA
312
+ "311","MCQ240L","Age when leukemia was first diagnosed","17-75","17-75 years old","Questionnaire",NA
313
+ "312","MCQ240L","Age when leukemia was first diagnosed","28-84","28-84 years old","Questionnaire",NA
314
+ "313","MCQ240L","Age when leukemia was first diagnosed","16","16 years or younger","Questionnaire",NA
315
+ "314","MCQ240L","Age when leukemia was first diagnosed","80","80 years or older","Questionnaire",NA
316
+ "315","MCQ240L","Age when leukemia was first diagnosed","85","85 years or older","Questionnaire",NA
317
+ "316","MCQ240L","Age when leukemia was first diagnosed","99999","Don't know","Questionnaire",NA
318
+ "317","MCQ240L","Age when leukemia was first diagnosed","77777","Refused","Questionnaire",NA
319
+ "318","MCQ240N","Age when lung cancer was first diagnosed","16","16 years or younger","Questionnaire",NA
320
+ "319","MCQ240N","Age when lung cancer was first diagnosed","17-76","17-76 years old","Questionnaire",NA
321
+ "320","MCQ240N","Age when lung cancer was first diagnosed","17-84","17-84 years old","Questionnaire",NA
322
+ "321","MCQ240N","Age when lung cancer was first diagnosed","29-79","29-79 years old","Questionnaire",NA
323
+ "322","MCQ240N","Age when lung cancer was first diagnosed","80","80 years or older","Questionnaire",NA
324
+ "323","MCQ240N","Age when lung cancer was first diagnosed","85","85 years or older","Questionnaire",NA
325
+ "324","MCQ240N","Age when lung cancer was first diagnosed","99999","Don't know","Questionnaire",NA
326
+ "325","MCQ240N","Age when lung cancer was first diagnosed","77777","Refused","Questionnaire",NA
327
+ "326","MCQ240O","Age when lymphoma or Hodgkin's Disease was first diagnosed","16","16 years or younger","Questionnaire",NA
328
+ "327","MCQ240O","Age when lymphoma or Hodgkin's Disease was first diagnosed","17-76","17-76 years old","Questionnaire",NA
329
+ "328","MCQ240O","Age when lymphoma or Hodgkin's Disease was first diagnosed","17-80","17-80 years old","Questionnaire",NA
330
+ "329","MCQ240O","Age when lymphoma or Hodgkin's Disease was first diagnosed","19-79","19-79 years old","Questionnaire",NA
331
+ "330","MCQ240O","Age when lymphoma or Hodgkin's Disease was first diagnosed","80","80 years or older","Questionnaire",NA
332
+ "331","MCQ240O","Age when lymphoma or Hodgkin's Disease was first diagnosed","85","85 years or older","Questionnaire",NA
333
+ "332","MCQ240O","Age when lymphoma or Hodgkin's Disease was first diagnosed","99999","Don't know","Questionnaire",NA
334
+ "333","MCQ240O","Age when lymphoma or Hodgkin's Disease was first diagnosed","77777","Refused","Questionnaire",NA
335
+ "334","MCQ240P","Age when melanoma was first diagnosed","16","16 years or younger","Questionnaire",NA
336
+ "335","MCQ240P","Age when melanoma was first diagnosed","17-78","17-78 years old","Questionnaire",NA
337
+ "336","MCQ240P","Age when melanoma was first diagnosed","17-79","17-79 years old","Questionnaire",NA
338
+ "337","MCQ240P","Age when melanoma was first diagnosed","17-83","17-83 years old","Questionnaire",NA
339
+ "338","MCQ240P","Age when melanoma was first diagnosed","80","80 years or older","Questionnaire",NA
340
+ "339","MCQ240P","Age when melanoma was first diagnosed","85","85 years or older","Questionnaire",NA
341
+ "340","MCQ240P","Age when melanoma was first diagnosed","99999","Don't know","Questionnaire",NA
342
+ "341","MCQ240P","Age when melanoma was first diagnosed","77777","Refused","Questionnaire",NA
343
+ "342","MCQ240Q","Age when mouth, tongue, or lip cancer was first diagnosed","16","16 years or younger","Questionnaire",NA
344
+ "343","MCQ240Q","Age when mouth, tongue, or lip cancer was first diagnosed","17-79","17-79 years old","Questionnaire",NA
345
+ "344","MCQ240Q","Age when mouth, tongue, or lip cancer was first diagnosed","27-70","27-70 years old","Questionnaire",NA
346
+ "345","MCQ240Q","Age when mouth, tongue, or lip cancer was first diagnosed","30-70","30-70 years old","Questionnaire",NA
347
+ "346","MCQ240Q","Age when mouth, tongue, or lip cancer was first diagnosed","80","80 years or older","Questionnaire",NA
348
+ "347","MCQ240Q","Age when mouth, tongue, or lip cancer was first diagnosed","85","85 years or older","Questionnaire",NA
349
+ "348","MCQ240Q","Age when mouth, tongue, or lip cancer was first diagnosed","99999","Don't know","Questionnaire",NA
350
+ "349","MCQ240Q","Age when mouth, tongue, or lip cancer was first diagnosed","77777","Refused","Questionnaire",NA
351
+ "350","MCQ240U","Age when prostate cancer was first diagnosed","17-79","17-79 years old","Questionnaire",NA
352
+ "351","MCQ240U","Age when prostate cancer was first diagnosed","17-84","17-84 years old","Questionnaire",NA
353
+ "352","MCQ240U","Age when prostate cancer was first diagnosed","16","16 years or younger","Questionnaire",NA
354
+ "353","MCQ240U","Age when prostate cancer was first diagnosed","32-79","32-79 years old","Questionnaire",NA
355
+ "354","MCQ240U","Age when prostate cancer was first diagnosed","80","80 years or older","Questionnaire",NA
356
+ "355","MCQ240U","Age when prostate cancer was first diagnosed","85","85 years or older","Questionnaire",NA
357
+ "356","MCQ240U","Age when prostate cancer was first diagnosed","99999","Don't know","Questionnaire",NA
358
+ "357","MCQ240U","Age when prostate cancer was first diagnosed","77777","Refused","Questionnaire",NA
359
+ "358","MCQ240W","Age when non-melanoma skin cancer was first diagnosed","16","16 years or younger","Questionnaire",NA
360
+ "359","MCQ240W","Age when non-melanoma skin cancer was first diagnosed","17-78","17-78 years old","Questionnaire",NA
361
+ "360","MCQ240W","Age when non-melanoma skin cancer was first diagnosed","17-79","17-79 years old","Questionnaire",NA
362
+ "361","MCQ240W","Age when non-melanoma skin cancer was first diagnosed","17-84","17-84 years old","Questionnaire",NA
363
+ "362","MCQ240W","Age when non-melanoma skin cancer was first diagnosed","80","80 years or older","Questionnaire",NA
364
+ "363","MCQ240W","Age when non-melanoma skin cancer was first diagnosed","85","85 years or older","Questionnaire",NA
365
+ "364","MCQ240W","Age when non-melanoma skin cancer was first diagnosed","99999","Don't know","Questionnaire",NA
366
+ "365","MCQ240W","Age when non-melanoma skin cancer was first diagnosed","77777","Refused","Questionnaire",NA
367
+ "366","MCQ240X","Age when the unknown kind of skin cancer was first diagnosed","16","16 years or younger","Questionnaire",NA
368
+ "367","MCQ240X","Age when the unknown kind of skin cancer was first diagnosed","17-79","17-79 years old","Questionnaire",NA
369
+ "368","MCQ240X","Age when the unknown kind of skin cancer was first diagnosed","17-84","17-84 years old","Questionnaire",NA
370
+ "369","MCQ240X","Age when the unknown kind of skin cancer was first diagnosed","18-79","18-79 years old","Questionnaire",NA
371
+ "370","MCQ240X","Age when the unknown kind of skin cancer was first diagnosed","80","80 years or older","Questionnaire",NA
372
+ "371","MCQ240X","Age when the unknown kind of skin cancer was first diagnosed","85","85 years or older","Questionnaire",NA
373
+ "372","MCQ240X","Age when the unknown kind of skin cancer was first diagnosed","99999","Don't know","Questionnaire",NA
374
+ "373","MCQ240X","Age when the unknown kind of skin cancer was first diagnosed","77777","Refused","Questionnaire",NA
375
+ "374","MCQ240Z","Age when stomach cancer was first diagnosed","16","16 years or younger","Questionnaire",NA
376
+ "375","MCQ240Z","Age when stomach cancer was first diagnosed","17-79","17-79 years old","Questionnaire",NA
377
+ "376","MCQ240Z","Age when stomach cancer was first diagnosed","22-82","22-82 years old","Questionnaire",NA
378
+ "377","MCQ240Z","Age when stomach cancer was first diagnosed","32-76","32-76 years old","Questionnaire",NA
379
+ "378","MCQ240Z","Age when stomach cancer was first diagnosed","80","80 years or older","Questionnaire",NA
380
+ "379","MCQ240Z","Age when stomach cancer was first diagnosed","85","85 years or older","Questionnaire",NA
381
+ "380","MCQ240Z","Age when stomach cancer was first diagnosed","99999","Don't know","Questionnaire",NA
382
+ "381","MCQ240Z","Age when stomach cancer was first diagnosed","77777","Refused","Questionnaire",NA
383
+ "382","MCQ280","About how old was she when she fractured her hip (the first time)?","1-101","1-101 years old","Questionnaire",NA
384
+ "383","MCQ280","About how old was she when she fractured her hip (the first time)?","555","50 +","Questionnaire",NA
385
+ "384","MCQ280","About how old was she when she fractured her hip (the first time)?","9-107","9-107 years old","Questionnaire",NA
386
+ "385","MCQ280","About how old was she when she fractured her hip (the first time)?","99999","Don't know","Questionnaire",NA
387
+ "386","MCQ280","About how old was she when she fractured her hip (the first time)?","77777","Refused","Questionnaire",NA
388
+ "387","MCQ280","About how old was she when she fractured her hip (the first time)?","444","Under 50","Questionnaire",NA
389
+ "388","MCQ320","How old {were you/was SP} when {you/he} first had {your/his} PSA test?","16","16 years or younger","Questionnaire",NA
390
+ "389","MCQ320","How old {were you/was SP} when {you/he} first had {your/his} PSA test?","17-79","17-79 years old","Questionnaire",NA
391
+ "390","MCQ320","How old {were you/was SP} when {you/he} first had {your/his} PSA test?","17-85","17-85 years old","Questionnaire",NA
392
+ "391","MCQ320","How old {were you/was SP} when {you/he} first had {your/his} PSA test?","80","80 years or older","Questionnaire",NA
393
+ "392","MCQ320","How old {were you/was SP} when {you/he} first had {your/his} PSA test?","999","Don't know","Questionnaire",NA
394
+ "393","MCQ320","How old {were you/was SP} when {you/he} first had {your/his} PSA test?","777","Refused","Questionnaire",NA
395
+ "394","MCQ570","How old {were you/was SP} when {you /s/he} first had gallbladder surgery?","11-99","11-99 years old","Questionnaire",NA
396
+ "395","MCQ570","How old {were you/was SP} when {you /s/he} first had gallbladder surgery?","15-79","15-79 years old","Questionnaire",NA
397
+ "396","MCQ570","How old {were you/was SP} when {you /s/he} first had gallbladder surgery?","20-87","20-87 years old","Questionnaire",NA
398
+ "397","MCQ570","How old {were you/was SP} when {you /s/he} first had gallbladder surgery?","80","80 years or older","Questionnaire",NA
399
+ "398","MCQ570","How old {were you/was SP} when {you /s/he} first had gallbladder surgery?","90","90 + years","Questionnaire",NA
400
+ "399","MCQ570","How old {were you/was SP} when {you /s/he} first had gallbladder surgery?","99999","Don't know","Questionnaire",NA
401
+ "400","MCQ570","How old {were you/was SP} when {you /s/he} first had gallbladder surgery?","77777","Refused","Questionnaire",NA
402
+ "401","PAD120","[Over the past 30 days], how often did {you/SP} do these tasks in or around {your/his/her} home or yard, that is tasks requiring at least moderate effort? [Such as raking leaves, mowing the lawn or heavy cleaning.]","1-95","1-95 times","Questionnaire",NA
403
+ "402","PAD120","[Over the past 30 days], how often did {you/SP} do these tasks in or around {your/his/her} home or yard, that is tasks requiring at least moderate effort? [Such as raking leaves, mowing the lawn or heavy cleaning.]","1-99","1-99 times","Questionnaire",NA
404
+ "403","PAD120","[Over the past 30 days], how often did {you/SP} do these tasks in or around {your/his/her} home or yard, that is tasks requiring at least moderate effort? [Such as raking leaves, mowing the lawn or heavy cleaning.]","100","100 +","Questionnaire",NA
405
+ "404","PAD120","[Over the past 30 days], how often did {you/SP} do these tasks in or around {your/his/her} home or yard, that is tasks requiring at least moderate effort? [Such as raking leaves, mowing the lawn or heavy cleaning.]","99999","Don't know","Questionnaire",NA
406
+ "405","PAD120","[Over the past 30 days], how often did {you/SP} do these tasks in or around {your/his/her} home or yard, that is tasks requiring at least moderate effort? [Such as raking leaves, mowing the lawn or heavy cleaning.]","77777","Refused","Questionnaire",NA
407
+ "406","PAD460","[Over the past 30 days], how often did {you/SP} do these physical activities? [Activities designed to strengthen {your/his/her} muscles such as lifting weights, push-ups or sit-ups.]","1-91","1-91 times","Questionnaire",NA
408
+ "407","PAD460","[Over the past 30 days], how often did {you/SP} do these physical activities? [Activities designed to strengthen {your/his/her} muscles such as lifting weights, push-ups or sit-ups.]","1-99","1-99 times","Questionnaire",NA
409
+ "408","PAD460","[Over the past 30 days], how often did {you/SP} do these physical activities? [Activities designed to strengthen {your/his/her} muscles such as lifting weights, push-ups or sit-ups.]","100","100 +","Questionnaire",NA
410
+ "409","PAD460","[Over the past 30 days], how often did {you/SP} do these physical activities? [Activities designed to strengthen {your/his/her} muscles such as lifting weights, push-ups or sit-ups.]","999","Don't know","Questionnaire",NA
411
+ "410","PAD460","[Over the past 30 days], how often did {you/SP} do these physical activities? [Activities designed to strengthen {your/his/her} muscles such as lifting weights, push-ups or sit-ups.]","777","Refused","Questionnaire",NA
412
+ "411","PAQ050Q","[Over the past 30 days], how often did {you/SP} do this? [Walk or bicycle as part of getting to and from work, or school, or to do errands.] PROBE: How many times per day, per week, or per month did {you/s/he} do these activities?","1-91","1-91 times","Questionnaire",NA
413
+ "412","PAQ050Q","[Over the past 30 days], how often did {you/SP} do this? [Walk or bicycle as part of getting to and from work, or school, or to do errands.] PROBE: How many times per day, per week, or per month did {you/s/he} do these activities?","1-99","1-99 times","Questionnaire",NA
414
+ "413","PAQ050Q","[Over the past 30 days], how often did {you/SP} do this? [Walk or bicycle as part of getting to and from work, or school, or to do errands.] PROBE: How many times per day, per week, or per month did {you/s/he} do these activities?","100","100 +","Questionnaire",NA
415
+ "414","PAQ050Q","[Over the past 30 days], how often did {you/SP} do this? [Walk or bicycle as part of getting to and from work, or school, or to do errands.] PROBE: How many times per day, per week, or per month did {you/s/he} do these activities?","99999","Don't know","Questionnaire",NA
416
+ "415","PAQ050Q","[Over the past 30 days], how often did {you/SP} do this? [Walk or bicycle as part of getting to and from work, or school, or to do errands.] PROBE: How many times per day, per week, or per month did {you/s/he} do these activities?","77777","Refused","Questionnaire",NA
417
+ "416","BMIWAIST","Waist Circumference Comment","1","Could not obtain","Response",NA
418
+ "417",NA,NA,"1","Breakfast","Dietary","DR1.030Z"
419
+ "418",NA,NA,"2","Brunch","Dietary","DR1.030Z"
420
+ "419",NA,NA,"3","Lunch","Dietary","DR1.030Z"
421
+ "420",NA,NA,"4","Snack/beverage","Dietary","DR1.030Z"
422
+ "421",NA,NA,"5","Dinner/supper","Dietary","DR1.030Z"
423
+ "422",NA,NA,"6","Infant feeding","Dietary","DR1.030Z"
424
+ "423",NA,NA,"7","Extended consumption","Dietary","DR1.030Z"
425
+ "424",NA,NA,"8","Other","Dietary","DR1.030Z"
426
+ "425",NA,NA,"9","Desayuno (Spanish)","Dietary","DR1.030Z"
427
+ "426",NA,NA,"10","Almuerzo (Spanish)","Dietary","DR1.030Z"
428
+ "427",NA,NA,"11","Comida (Spanish)","Dietary","DR1.030Z"
429
+ "428",NA,NA,"12","Merienda (Spanish)","Dietary","DR1.030Z"
430
+ "429",NA,NA,"13","Cena (Spanish)","Dietary","DR1.030Z"
431
+ "430",NA,NA,"14","Entre comida/bebida (Spanish)","Dietary","DR1.030Z"
432
+ "431",NA,NA,"15","Bocadillo (Spanish)","Dietary","DR1.030Z"
433
+ "432",NA,NA,"16","Botana (Spanish)","Dietary","DR1.030Z"
434
+ "433",NA,NA,"99","Don't know","Dietary","DR1.030Z"
435
+ "434",NA,NA,"2","Lunch","Dietary","DR1.030Z"
436
+ "435",NA,NA,"3","Dinner/supper","Dietary","DR1.030Z"
437
+ "436",NA,NA,"5","Brunch","Dietary","DR1.030Z"
438
+ "437",NA,NA,"6","Snack/beverage","Dietary","DR1.030Z"
439
+ "438",NA,NA,"8","Infant feeding","Dietary","DR1.030Z"
440
+ "439",NA,NA,"9","Extended consumption","Dietary","DR1.030Z"
441
+ "440",NA,NA,"10","Desayano (Spanish)","Dietary","DR1.030Z"
442
+ "441",NA,NA,"11","Almuerzo (Spanish)","Dietary","DR1.030Z"
443
+ "442",NA,NA,"12","Comida (Spanish)","Dietary","DR1.030Z"
444
+ "443",NA,NA,"13","Merienda (Spanish)","Dietary","DR1.030Z"
445
+ "444",NA,NA,"14","Cena (Spanish)","Dietary","DR1.030Z"
446
+ "445",NA,NA,"15","Entre comida/bebida/tentempie (Spanish)","Dietary","DR1.030Z"
447
+ "446",NA,NA,"17","Bocadillo (Spanish)","Dietary","DR1.030Z"
448
+ "447",NA,NA,"91","Other","Dietary","DR1.030Z"
449
+ "448",NA,NA,"3","Dinner","Dietary","DR1.030Z"
450
+ "449",NA,NA,"4","Supper","Dietary","DR1.030Z"
451
+ "450",NA,NA,"6","Snack","Dietary","DR1.030Z"
452
+ "451",NA,NA,"7","Drink","Dietary","DR1.030Z"
453
+ "452",NA,NA,"10","Desayano (breakfast)","Dietary","DR1.030Z"
454
+ "453",NA,NA,"11","Almuerzo (breakfast)","Dietary","DR1.030Z"
455
+ "454",NA,NA,"12","Comida (lunch)","Dietary","DR1.030Z"
456
+ "455",NA,NA,"13","Merienda (snack)","Dietary","DR1.030Z"
457
+ "456",NA,NA,"14","Cena (dinner)","Dietary","DR1.030Z"
458
+ "457",NA,NA,"15","Entre comida (snack)","Dietary","DR1.030Z"
459
+ "458",NA,NA,"16","Botana (snack)","Dietary","DR1.030Z"
460
+ "459",NA,NA,"17","Bocadillo (snack)","Dietary","DR1.030Z"
461
+ "460",NA,NA,"18","Tentempie (snack)","Dietary","DR1.030Z"
462
+ "461",NA,NA,"19","Bebida (drink)","Dietary","DR1.030Z"
463
+ "462",NA,NA,"0","Non-combination food","Dietary","DR1CCMTX"
464
+ "463",NA,NA,"90","Other mixtures","Dietary","DR1CCMTX"
465
+ "464",NA,NA,"9","Dried beans and vegetable w/ additions","Dietary","DR1CCMTX"
466
+ "465",NA,NA,"1","Beverage w/ additions","Dietary","DR1CCMTX"
467
+ "466",NA,NA,"3","Bread/baked products w/ additions","Dietary","DR1CCMTX"
468
+ "467",NA,NA,"2","Cereal w/ additions","Dietary","DR1CCMTX"
469
+ "468",NA,NA,"14","Chips w/ additions","Dietary","DR1CCMTX"
470
+ "469",NA,NA,"12","Meat, poultry, fish","Dietary","DR1CCMTX"
471
+ "470",NA,NA,"7","Frozen meals","Dietary","DR1CCMTX"
472
+ "471",NA,NA,"10","Fruit w/ additions","Dietary","DR1CCMTX"
473
+ "472",NA,NA,"4","Salad","Dietary","DR1CCMTX"
474
+ "473",NA,NA,"5","Sandwiches","Dietary","DR1CCMTX"
475
+ "474",NA,NA,"6","Soup","Dietary","DR1CCMTX"
476
+ "475",NA,NA,"11","Tortilla products","Dietary","DR1CCMTX"
477
+ "476",NA,NA,"1","Beverage w/ adds","Dietary","DR1CCMTX"
478
+ "477",NA,NA,"2","Cereal w/ adds","Dietary","DR1CCMTX"
479
+ "478",NA,NA,"3","Bread/baked products w/ adds","Dietary","DR1CCMTX"
480
+ "479",NA,NA,"8","Ice cream/frozen yogurt w/ additions","Dietary","DR1CCMTX"
481
+ "480",NA,NA,"9","Dried beans and vegetable w/ adds","Dietary","DR1CCMTX"
482
+ "481",NA,NA,"10","Fruit w/ adds","Dietary","DR1CCMTX"
483
+ "482",NA,NA,"11","Tortilla Products","Dietary","DR1CCMTX"
484
+ "483",NA,NA,"13","Lunchables","Dietary","DR1CCMTX"
485
+ "484","DRXDRSTZ","Dietary Recall Status","1","Reliable and met the minimum criteria","Dietary","DR1DRSTZ"
486
+ "485","DRXDRSTZ","Dietary Recall Status","2","Not reliable or not met the minimum criteria","Dietary","DR1DRSTZ"
487
+ "486","DRXDRSTZ","Dietary Recall Status","9","Interview lost due to computer malfunction or file transfer problem","Dietary","DR1DRSTZ"
488
+ "487","DRXDRSTZ","Dietary Recall Status","4","Reported consuming breast-milk","Dietary","DR1DRSTZ"
489
+ "488","DRXDRSTZ","Dietary Recall Status","88","Blank but applicable","Dietary","DR1DRSTZ"
490
+ "489","DRXDRSTZ","Dietary Recall Status","5","Not done","Dietary","DR1DRSTZ"
491
+ "490",NA,NA,"2","No","Dietary","DR1.040Z"
492
+ "491",NA,NA,"1","Yes (home)","Dietary","DR1.040Z"
493
+ "492",NA,NA,"7","Refused","Dietary","DR1.040Z"
494
+ "493",NA,NA,"9","Don't know","Dietary","DR1.040Z"
495
+ "494","DRXTWSZ","Tap Water Source","1","Community supply","Dietary","DR1TWSZ"
496
+ "495","DRXTWSZ","Tap Water Source","91","Other","Dietary","DR1TWSZ"
497
+ "496","DRXTWSZ","Tap Water Source","4","Don't drink tap water","Dietary","DR1TWSZ"
498
+ "497","DRXTWSZ","Tap Water Source","99","Don't know","Dietary","DR1TWSZ"
499
+ "498","DBQ095Z","Type of salt you usually add at table","4","Doesn't use or add salt products at the table","Dietary","DBQ095Z"
500
+ "499","DBQ095Z","Type of salt you usually add at table","1","Ordinary salt [includes regular iodized salt, sea salt and seasoning salts made with regular salt]","Dietary","DBQ095Z"
501
+ "500","DBQ095Z","Type of salt you usually add at table","2","Lite salt","Dietary","DBQ095Z"
502
+ "501","DBQ095Z","Type of salt you usually add at table","3","Salt substitute","Dietary","DBQ095Z"
503
+ "502","DBQ095Z","Type of salt you usually add at table","88","Blank but applicable","Dietary","DBQ095Z"
504
+ "503","DBQ095Z","Type of salt you usually add at table","99","Don't know","Dietary","DBQ095Z"
505
+ "504","DBQ095Z","Type of salt you usually add at table","7","Refused","Dietary","DBQ095Z"
506
+ "505","DBQ095Z","Type of salt you usually add at table","91","Other","Dietary","DBQ095Z"
507
+ "506","DRXHELP","Who helped in responding for this interview","1","SP","Dietary","DR1HELP"
508
+ "507","DRXHELP","Who helped in responding for this interview","4","Parent of SP","Dietary","DR1HELP"
509
+ "508","DRXHELP","Who helped in responding for this interview","5","Spouse of SP","Dietary","DR1HELP"
510
+ "509","DRXHELP","Who helped in responding for this interview","6","Child of SP","Dietary","DR1HELP"
511
+ "510","DRXHELP","Who helped in responding for this interview","7","Grandparent of SP","Dietary","DR1HELP"
512
+ "511","DRXHELP","Who helped in responding for this interview","8","Friend, Partner, Non Relative","Dietary","DR1HELP"
513
+ "512","DRXHELP","Who helped in responding for this interview","9","Translator, not a HH member","Dietary","DR1HELP"
514
+ "513","DRXHELP","Who helped in responding for this interview","10","Child care provider, Caretaker","Dietary","DR1HELP"
515
+ "514","DRXHELP","Who helped in responding for this interview","11","Other Relative","Dietary","DR1HELP"
516
+ "515","DRXHELP","Who helped in responding for this interview","12","No One","Dietary","DR1HELP"
517
+ "516","DRXHELP","Who helped in responding for this interview","14","Other specify","Dietary","DR1HELP"
518
+ "517","DRXHELP","Who helped in responding for this interview","77","Refused","Dietary","DR1HELP"
519
+ "518","DRXHELP","Who helped in responding for this interview","99","Don't know","Dietary","DR1HELP"
520
+ "519","DRXMRESP","Who was the main respondent for this interview?","1","SP","Dietary","DR1MRESP"
521
+ "520","DRXMRESP","Who was the main respondent for this interview?","97","Proxy","Dietary","DR1MRESP"
522
+ "521","DRXMRESP","Who was the main respondent for this interview?","98","SP and proxy","Dietary","DR1MRESP"
523
+ "522","DRXMRESP","Who was the main respondent for this interview?","88","Blank but applicable","Dietary","DR1MRESP"
524
+ "523","DRXMRESP","Who was the main respondent for this interview?","2","Mother of SP","Dietary","DR1MRESP"
525
+ "524","DRXMRESP","Who was the main respondent for this interview?","3","Father of SP","Dietary","DR1MRESP"
526
+ "525","DRXMRESP","Who was the main respondent for this interview?","5","Spouse of SP","Dietary","DR1MRESP"
527
+ "526","DRXMRESP","Who was the main respondent for this interview?","6","Child of SP","Dietary","DR1MRESP"
528
+ "527","DRXMRESP","Who was the main respondent for this interview?","7","Grandparent of SP","Dietary","DR1MRESP"
529
+ "528","DRXMRESP","Who was the main respondent for this interview?","8","Friend, Partner, Non Relative","Dietary","DR1MRESP"
530
+ "529","DRXMRESP","Who was the main respondent for this interview?","9","Translator, not a HH member","Dietary","DR1MRESP"
531
+ "530","DRXMRESP","Who was the main respondent for this interview?","10","Child care provider, Caretaker","Dietary","DR1MRESP"
532
+ "531","DRXMRESP","Who was the main respondent for this interview?","11","Other Relative","Dietary","DR1MRESP"
533
+ "532","DRXMRESP","Who was the main respondent for this interview?","14","Other specify","Dietary","DR1MRESP"
534
+ "533","DRXMRESP","Who was the main respondent for this interview?","77","Refused","Dietary","DR1MRESP"
535
+ "534","DRXMRESP","Who was the main respondent for this interview?","99","Don't know","Dietary","DR1MRESP"
536
+ "535","DRXTWSZ","Tap Water Source","1","Community supply","Dietary","DR2TWSZ"
537
+ "536","DRXTWSZ","Tap Water Source","91","Other","Dietary","DR2TWSZ"
538
+ "537","DRXTWSZ","Tap Water Source","4","Don't drink tap water","Dietary","DR2TWSZ"
539
+ "538","DRXTWSZ","Tap Water Source","99","Don't know","Dietary","DR2TWSZ"
540
+ "539","DRXHELP","Who helped in responding for this interview","1","SP","Dietary","DR2HELP"
541
+ "540","DRXHELP","Who helped in responding for this interview","4","Parent of SP","Dietary","DR2HELP"
542
+ "541","DRXHELP","Who helped in responding for this interview","5","Spouse of SP","Dietary","DR2HELP"
543
+ "542","DRXHELP","Who helped in responding for this interview","6","Child of SP","Dietary","DR2HELP"
544
+ "543","DRXHELP","Who helped in responding for this interview","7","Grandparent of SP","Dietary","DR2HELP"
545
+ "544","DRXHELP","Who helped in responding for this interview","8","Friend, Partner, Non Relative","Dietary","DR2HELP"
546
+ "545","DRXHELP","Who helped in responding for this interview","9","Translator, not a HH member","Dietary","DR2HELP"
547
+ "546","DRXHELP","Who helped in responding for this interview","10","Child care provider, Caretaker","Dietary","DR2HELP"
548
+ "547","DRXHELP","Who helped in responding for this interview","11","Other Relative","Dietary","DR2HELP"
549
+ "548","DRXHELP","Who helped in responding for this interview","12","No One","Dietary","DR2HELP"
550
+ "549","DRXHELP","Who helped in responding for this interview","14","Other specify","Dietary","DR2HELP"
551
+ "550","DRXHELP","Who helped in responding for this interview","77","Refused","Dietary","DR2HELP"
552
+ "551","DRXHELP","Who helped in responding for this interview","99","Don't know","Dietary","DR2HELP"
553
+ "552","DRXMRESP","Who was the main respondent for this interview?","1","SP","Dietary","DR2MRESP"
554
+ "553","DRXMRESP","Who was the main respondent for this interview?","2","Mother of SP","Dietary","DR2MRESP"
555
+ "554","DRXMRESP","Who was the main respondent for this interview?","3","Father of SP","Dietary","DR2MRESP"
556
+ "555","DRXMRESP","Who was the main respondent for this interview?","5","Spouse of SP","Dietary","DR2MRESP"
557
+ "556","DRXMRESP","Who was the main respondent for this interview?","6","Child of SP","Dietary","DR2MRESP"
558
+ "557","DRXMRESP","Who was the main respondent for this interview?","7","Grandparent of SP","Dietary","DR2MRESP"
559
+ "558","DRXMRESP","Who was the main respondent for this interview?","8","Friend, Partner, Non Relative","Dietary","DR2MRESP"
560
+ "559","DRXMRESP","Who was the main respondent for this interview?","9","Translator, not a HH member","Dietary","DR2MRESP"
561
+ "560","DRXMRESP","Who was the main respondent for this interview?","10","Child care provider, Caretaker","Dietary","DR2MRESP"
562
+ "561","DRXMRESP","Who was the main respondent for this interview?","11","Other Relative","Dietary","DR2MRESP"
563
+ "562","DRXMRESP","Who was the main respondent for this interview?","14","Other specify","Dietary","DR2MRESP"
564
+ "563","DRXMRESP","Who was the main respondent for this interview?","77","Refused","Dietary","DR2MRESP"
565
+ "564","DRXMRESP","Who was the main respondent for this interview?","99","Don't know","Dietary","DR2MRESP"
566
+ "565","DBD100","How often {do you/does SP} add ordinary salt to {your/his/her/SP's} food at the table? Would you say . . .","1","Rarely","Dietary","DBD100"
567
+ "566","DBD100","How often {do you/does SP} add ordinary salt to {your/his/her/SP's} food at the table? Would you say . . .","2","Occasionally","Dietary","DBD100"
568
+ "567","DBD100","How often {do you/does SP} add ordinary salt to {your/his/her/SP's} food at the table? Would you say . . .","3","Very often","Dietary","DBD100"
569
+ "568","DBD100","How often {do you/does SP} add ordinary salt to {your/his/her/SP's} food at the table? Would you say . . .","88","Blank but applicable","Dietary","DBD100"
570
+ "569","DBD100","How often {do you/does SP} add ordinary salt to {your/his/her/SP's} food at the table? Would you say . . .","9","Don't know","Dietary","DBD100"
571
+ "570","DBD100","How often {do you/does SP} add ordinary salt to {your/his/her/SP's} food at the table? Would you say . . .","7","Refused","Dietary","DBD100"
dictionary_nhanes.csv ADDED
The diff for this file is too large to render. See raw diff
 
dietary.csv ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:85e450aea8a92e9465ab5009765a4723920ae3367dfcbed4789043a3d720cc62
3
+ size 531203863
m - nhanes_1988_2018.R ADDED
@@ -0,0 +1,169 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ #############################################################################################################
2
+ ############################### MAIN SCRIPT - FORMING NHANES CURATED DATASETS #############################
3
+ #############################################################################################################
4
+
5
+ #~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~#
6
+ #~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Assign Directories of NHANES Datasets ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~#
7
+ #~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~#
8
+
9
+ mortality_directory <- paste(working_directory
10
+ , "Mortality Datasets"
11
+ , sep = "/")
12
+
13
+ #~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~#
14
+ #~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Compile the NHANES Datasets ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~#
15
+ #~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~#
16
+
17
+ # Upload the cleaning documentation for all datasets
18
+
19
+
20
+ # Extract the individual mortality datasets and compile them into the unclean mortality dataset
21
+ mortality_unclean <- compile_mortality_dataset(dataset_directory = mortality_directory
22
+ , current_directory = working_directory)
23
+
24
+ setwd(working_directory)
25
+ response_unclean <- compile_datasets(cleaning_documentation = list_master_files$Response
26
+ , current_directory = working_directory
27
+ , name_dataset = "Response")
28
+
29
+ dietary_unclean <- NHANES_dietary_final
30
+
31
+ # response_unclean <- clean_duplicates_of_seqn_from_cycles(response_unclean)
32
+
33
+
34
+ demographics_unclean <- compile_datasets(cleaning_documentation = list_master_files$Demographics
35
+ , current_directory = working_directory
36
+ , name_dataset = "Demographics")
37
+
38
+ # demographics_unclean <- dumb_compile_demographics_datasets(list_document_cleaning = list_master_files
39
+ # , current_directory = working_directory
40
+ # , name_dataset = "Demographics")
41
+
42
+
43
+ # Fix this due to change from df to list for the cleaning documentation
44
+ medications_unclean <- compile_datasets(cleaning_documentation = list_master_files$Questionnaire %>%
45
+ filter(grepl("\\bPrescription Medications\\b"
46
+ , .$file_summary) == TRUE &
47
+ is.na(.$SDDSRVYR) == FALSE)
48
+ , current_directory = working_directory)
49
+
50
+
51
+ chemicals_unclean <- compile_datasets(cleaning_documentation = list_master_files$Chemicals
52
+ , current_directory = working_directory
53
+ , name_dataset = "Chemicals")
54
+
55
+
56
+ weights_unclean <- compile_datasets(cleaning_documentation = list_master_files$Weights
57
+ , current_directory = working_directory
58
+ , name_dataset = "Weights")
59
+
60
+ occupations_unclean <- compile_datasets(cleaning_documentation = list_master_files$Occupation
61
+ , current_directory = working_directory
62
+ , name_dataset = "Occupation")
63
+
64
+ setwd(working_directory)
65
+ questionnaire_unclean <- compile_datasets(cleaning_documentation = list_master_files$Questionnaire %>%
66
+ filter(grepl("\\bPrescription Medications\\b"
67
+ , .$file_summary) == FALSE &
68
+ is.na(.$SDDSRVYR) == FALSE)
69
+ , current_directory = working_directory
70
+ , name_dataset = "Questionnaire")
71
+
72
+ #~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~#
73
+ #~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Clean the NHANES Datasets ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~#
74
+ #~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~#
75
+
76
+ # Clean the mortality dataset
77
+ mortality_clean <- clean_mortality_dataset(mortality_unclean
78
+ , list_master_files
79
+ , "Mortality")
80
+
81
+ dietary_clean <- clean_dietary_dataset(dietary_unclean
82
+ , list_master_files
83
+ , "Dietary")
84
+
85
+ demographics_clean <- clean_demographics_dataset(demographics_unclean
86
+ , list_master_files
87
+ , "Demographics")
88
+
89
+ setwd(working_directory)
90
+ response_clean_test <- clean_response_dataset(response_unclean
91
+ , list_master_files
92
+ , "Response"
93
+ , demographics_clean)
94
+
95
+ medications_clean <- clean_medications_dataset(medications_unclean
96
+ , list_master_files
97
+ , "Questionnaire")
98
+
99
+
100
+
101
+ chemicals_clean_test <- clean_chemicals_dataset(chemicals_unclean
102
+ , list_master_files
103
+ , "Chemicals")
104
+
105
+ list_chemicals_clean <- clean_chemicals_dataset(chemicals_unclean
106
+ , list_master_files
107
+ , "Chemicals")
108
+
109
+ chemicals_clean <- list_chemicals_clean$only_harmonized_variable
110
+
111
+ comments_unclean <- list_chemicals_clean$harmonized_and_unharmonized_variables
112
+
113
+ comments_clean <- form_comments_dataset(comments_unclean
114
+ , list_master_files
115
+ , "Chemicals")
116
+
117
+ weights_clean <- form_survey_weights_dataset(weights_unclean
118
+ , list_master_files
119
+ , "Weights")
120
+
121
+ occupation_clean <- clean_occupation_dataset(occupations_unclean
122
+ , list_master_files)
123
+
124
+
125
+
126
+ # process_fix_categories(list_master_files$`Questionnaire Fix Category`)
127
+ #
128
+ # check_num_cycles_documentation(list_master_files
129
+ # , "Questionnaire")
130
+
131
+ # process_lower_cases_fix_cats(list_master_files$`Questionnaire Fix Category`)
132
+
133
+ # check_new_codename(list_master_files
134
+ # , "Questionnaire")
135
+ #
136
+ # eliminate_fix_categories_same(list_master_files$`Questionnaire Fix Category`)
137
+
138
+
139
+ questionnaire_clean <- clean_questionnaire_dataset(questionnaire_unclean
140
+ , list_master_files
141
+ , "Questionnaire")
142
+
143
+
144
+ #~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~#
145
+ #~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Create dictionary ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~#
146
+ #~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~#
147
+
148
+ # List of tables on inconsistencies for each type of module or dataset
149
+ list_master_files <- upload_nhanes_master_files("NHANES - Master List of Files 1i.xlsx")
150
+
151
+ # Dictionary of drugs and their descriptors
152
+ df_medications_drug_info <- create_dictionary_drugs("RXQ_DRUG")
153
+
154
+ # Dictionary of all variables in curated NHANES datasets and their descriptors
155
+ df_dictionary <- create_dictionary(list_dataset = list("mortality" = mortality_clean
156
+ , "dietary" = dietary_clean
157
+ , "demographics" = demographics_clean
158
+ , "response" = response_clean
159
+ , "medications" = medications_clean
160
+ , "questionnaire" = questionnaire_clean
161
+ , "chemicals" = chemicals_clean
162
+ , "occupation" = occupation_clean
163
+ , "weights" = weights_clean
164
+ , "comments" = comments_clean)
165
+ , list_documentations = list_master_files)
166
+
167
+ # Dataset of harmonized levels for categorical variables
168
+ df_levels_categorical_variables <- create_dictionary_harmonized_categories(list_documentations = list_master_files)
169
+
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nhanes_inconsistencies_documentation.xlsx ADDED
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questionnaire.csv ADDED
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response.csv ADDED
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