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- session_Experimenter_1_2022-06-14/experiment_1_LR/field_GCL1_structure.txt +396 -0
- session_Experimenter_1_2022-07-14/experiment_2_RR/field_GCL0_structure.txt +318 -0
- session_Experimenter_2_2022-02-10/experiment_1_RR/field_RGC0_structure.txt +204 -0
- session_Experimenter_2_2022-02-10/experiment_1_RR/field_RGC1_structure.txt +204 -0
- session_Experimenter_2_2022-02-10/experiment_1_RR/field_RGC2_structure.txt +204 -0
- session_Experimenter_2_2022-02-10/experiment_2_LR/field_RGC1_structure.txt +204 -0
- session_Experimenter_2_2022-02-10/experiment_2_LR/field_RGC2_structure.txt +204 -0
- session_Experimenter_2_2022-02-10/experiment_2_LR/field_RGC3_structure.txt +204 -0
- session_Experimenter_2_2022-07-05/experiment_1_LR/field_RGC0_structure.txt +224 -0
- session_Experimenter_2_2022-07-05/experiment_1_LR/field_RGC1_structure.txt +224 -0
- session_Experimenter_2_2022-07-05/experiment_1_LR/field_RGC2_structure.txt +224 -0
- session_Experimenter_2_2022-07-05/experiment_1_LR/field_RGC3_structure.txt +224 -0
- session_Experimenter_2_2022-07-05/experiment_1_LR/field_RGC4_structure.txt +224 -0
- session_Experimenter_2_2022-07-19/experiment_1_LR/field_RGC0_structure.txt +224 -0
- session_Experimenter_2_2022-07-19/experiment_1_LR/field_RGC1_structure.txt +224 -0
- session_Experimenter_2_2022-07-21/experiment_1_LR/field_RGC0_structure.txt +224 -0
- session_Experimenter_2_2022-07-21/experiment_1_LR/field_RGC1_structure.txt +224 -0
- session_Experimenter_2_2022-08-17/experiment_1_LR/field_RGC0_structure.txt +224 -0
- session_Experimenter_2_2022-08-17/experiment_1_LR/field_RGC1_structure.txt +224 -0
- session_Experimenter_2_2022-08-17/experiment_1_LR/field_RGC2_structure.txt +224 -0
- session_Experimenter_2_2022-09-21/experiment_1_RR/field_RGC0_structure.txt +224 -0
- session_Experimenter_2_2022-09-21/experiment_1_RR/field_RGC1_structure.txt +224 -0
- session_Experimenter_2_2022-09-21/experiment_1_RR/field_RGC2_structure.txt +224 -0
- session_Experimenter_2_2022-09-21/experiment_1_RR/field_RGC3_structure.txt +224 -0
- session_Experimenter_2_2022-09-21/experiment_1_RR/field_RGC4_structure.txt +224 -0
- session_Experimenter_2_2022-09-21/experiment_1_RR/field_RGC5_structure.txt +224 -0
- session_Experimenter_2_2022-09-21/experiment_1_RR/field_RGC6_structure.txt +224 -0
- session_Experimenter_2_2022-09-21/experiment_1_RR/field_RGC7_structure.txt +224 -0
- session_Experimenter_2_2022-09-21/experiment_1_RR/field_RGC8_structure.txt +224 -0
- session_Experimenter_2_2022-09-29/experiment_1_LR/field_RGC0_structure.txt +163 -0
- session_Experimenter_2_2022-09-29/experiment_1_LR/field_RGC1_structure.txt +163 -0
- session_Experimenter_2_2022-09-29/experiment_1_LR/field_RGC2_structure.txt +163 -0
- session_Experimenter_2_2022-09-29/experiment_1_LR/field_RGC3_structure.txt +163 -0
- session_Experimenter_2_2022-09-29/experiment_1_LR/field_RGC4_structure.txt +163 -0
- session_Experimenter_2_2022-09-29/experiment_1_LR/field_RGC5_structure.txt +163 -0
- session_Experimenter_2_2022-12-22/experiment_1_RR/field_RGC1_structure.txt +224 -0
- session_Experimenter_2_2022-12-22/experiment_1_RR/field_RGC2_structure.txt +224 -0
- session_Experimenter_2_2022-12-22/experiment_2_LR/field_RGC0_structure.txt +204 -0
- session_Experimenter_2_2022-12-22/experiment_2_LR/field_RGC1_structure.txt +204 -0
- session_Experimenter_2_2023-02-20/experiment_2_LR/field_RGC1_structure.txt +224 -0
- session_Experimenter_2_2023-02-20/experiment_2_LR/field_RGC2_structure.txt +224 -0
- session_Experimenter_2_2023-02-20/experiment_2_LR/field_RGC4_structure.txt +224 -0
- session_Experimenter_2_2023-02-20/experiment_2_LR/field_RGC5_structure.txt +224 -0
- session_Experimenter_2_2023-02-20/experiment_2_LR/field_RGC7_structure.txt +224 -0
- session_Experimenter_2_2023-02-20/experiment_2_LR/field_RGC8_structure.txt +224 -0
- session_Experimenter_2_2023-09-05/experiment_1_LR/field_RGC0_structure.txt +224 -0
- session_Experimenter_2_2023-09-05/experiment_1_LR/field_RGC1_structure.txt +224 -0
- session_Experimenter_2_2023-09-05/experiment_1_LR/field_RGC2_structure.txt +224 -0
- session_Experimenter_2_2023-09-05/experiment_1_LR/field_RGC3_structure.txt +224 -0
- session_Experimenter_2_2023-09-05/experiment_1_LR/field_RGC4_structure.txt +224 -0
session_Experimenter_1_2022-06-14/experiment_1_LR/field_GCL1_structure.txt
ADDED
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| 1 |
+
NWB File Structure Report
|
| 2 |
+
========================
|
| 3 |
+
File: field_GCL1.nwb
|
| 4 |
+
Size: 97.08 MB
|
| 5 |
+
Generated: 2025-10-31 16:12:23
|
| 6 |
+
|
| 7 |
+
Structure:
|
| 8 |
+
----------
|
| 9 |
+
acquisition/ (Group)
|
| 10 |
+
TwoPhotonSeries_Cond_C1_chirp_Pres_1/ (Group)
|
| 11 |
+
data (1456, 64, 64) (uint16) (Dataset)
|
| 12 |
+
imaging_plane/ (Group)
|
| 13 |
+
OpticalChannel/ (Group)
|
| 14 |
+
description (object) (Dataset)
|
| 15 |
+
emission_lambda (float64) (Dataset)
|
| 16 |
+
description (object) (Dataset)
|
| 17 |
+
device/ (Group)
|
| 18 |
+
excitation_lambda (float64) (Dataset)
|
| 19 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 20 |
+
imaging_rate (float64) (Dataset)
|
| 21 |
+
indicator (object) (Dataset)
|
| 22 |
+
location (object) (Dataset)
|
| 23 |
+
timestamps (1456,) (float64) (Dataset)
|
| 24 |
+
TwoPhotonSeries_Cond_C1_movingbar_Pres_1/ (Group)
|
| 25 |
+
data (920, 64, 64) (uint16) (Dataset)
|
| 26 |
+
imaging_plane/ (Group)
|
| 27 |
+
OpticalChannel/ (Group)
|
| 28 |
+
description (object) (Dataset)
|
| 29 |
+
emission_lambda (float64) (Dataset)
|
| 30 |
+
description (object) (Dataset)
|
| 31 |
+
device/ (Group)
|
| 32 |
+
excitation_lambda (float64) (Dataset)
|
| 33 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 34 |
+
imaging_rate (float64) (Dataset)
|
| 35 |
+
indicator (object) (Dataset)
|
| 36 |
+
location (object) (Dataset)
|
| 37 |
+
timestamps (920,) (float64) (Dataset)
|
| 38 |
+
TwoPhotonSeries_Cond_C1_noise_Pres_1/ (Group)
|
| 39 |
+
data (2520, 64, 64) (uint16) (Dataset)
|
| 40 |
+
imaging_plane/ (Group)
|
| 41 |
+
OpticalChannel/ (Group)
|
| 42 |
+
description (object) (Dataset)
|
| 43 |
+
emission_lambda (float64) (Dataset)
|
| 44 |
+
description (object) (Dataset)
|
| 45 |
+
device/ (Group)
|
| 46 |
+
excitation_lambda (float64) (Dataset)
|
| 47 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 48 |
+
imaging_rate (float64) (Dataset)
|
| 49 |
+
indicator (object) (Dataset)
|
| 50 |
+
location (object) (Dataset)
|
| 51 |
+
timestamps (2520,) (float64) (Dataset)
|
| 52 |
+
TwoPhotonSeries_Cond_C2_chirp_Pres_1/ (Group)
|
| 53 |
+
data (1457, 64, 64) (uint16) (Dataset)
|
| 54 |
+
imaging_plane/ (Group)
|
| 55 |
+
OpticalChannel/ (Group)
|
| 56 |
+
description (object) (Dataset)
|
| 57 |
+
emission_lambda (float64) (Dataset)
|
| 58 |
+
description (object) (Dataset)
|
| 59 |
+
device/ (Group)
|
| 60 |
+
excitation_lambda (float64) (Dataset)
|
| 61 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 62 |
+
imaging_rate (float64) (Dataset)
|
| 63 |
+
indicator (object) (Dataset)
|
| 64 |
+
location (object) (Dataset)
|
| 65 |
+
timestamps (1457,) (float64) (Dataset)
|
| 66 |
+
TwoPhotonSeries_Cond_C2_movingbar_Pres_1/ (Group)
|
| 67 |
+
data (932, 64, 64) (uint16) (Dataset)
|
| 68 |
+
imaging_plane/ (Group)
|
| 69 |
+
OpticalChannel/ (Group)
|
| 70 |
+
description (object) (Dataset)
|
| 71 |
+
emission_lambda (float64) (Dataset)
|
| 72 |
+
description (object) (Dataset)
|
| 73 |
+
device/ (Group)
|
| 74 |
+
excitation_lambda (float64) (Dataset)
|
| 75 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 76 |
+
imaging_rate (float64) (Dataset)
|
| 77 |
+
indicator (object) (Dataset)
|
| 78 |
+
location (object) (Dataset)
|
| 79 |
+
timestamps (932,) (float64) (Dataset)
|
| 80 |
+
TwoPhotonSeries_Cond_C2_noise_Pres_1/ (Group)
|
| 81 |
+
data (2471, 64, 64) (uint16) (Dataset)
|
| 82 |
+
imaging_plane/ (Group)
|
| 83 |
+
OpticalChannel/ (Group)
|
| 84 |
+
description (object) (Dataset)
|
| 85 |
+
emission_lambda (float64) (Dataset)
|
| 86 |
+
description (object) (Dataset)
|
| 87 |
+
device/ (Group)
|
| 88 |
+
excitation_lambda (float64) (Dataset)
|
| 89 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 90 |
+
imaging_rate (float64) (Dataset)
|
| 91 |
+
indicator (object) (Dataset)
|
| 92 |
+
location (object) (Dataset)
|
| 93 |
+
timestamps (2471,) (float64) (Dataset)
|
| 94 |
+
analysis/ (Group)
|
| 95 |
+
file_create_date (1,) (object) (Dataset)
|
| 96 |
+
general/ (Group)
|
| 97 |
+
devices/ (Group)
|
| 98 |
+
Microscope/ (Group)
|
| 99 |
+
experiment_metadata/ (Group)
|
| 100 |
+
experiment_number (object) (Dataset)
|
| 101 |
+
eye (object) (Dataset)
|
| 102 |
+
preparation_orientation (object) (Dataset)
|
| 103 |
+
setup_id (object) (Dataset)
|
| 104 |
+
experimenter (1,) (object) (Dataset)
|
| 105 |
+
institution (object) (Dataset)
|
| 106 |
+
lab (object) (Dataset)
|
| 107 |
+
optophysiology/ (Group)
|
| 108 |
+
ImagingPlane/ (Group)
|
| 109 |
+
OpticalChannel/ (Group)
|
| 110 |
+
description (object) (Dataset)
|
| 111 |
+
emission_lambda (float64) (Dataset)
|
| 112 |
+
description (object) (Dataset)
|
| 113 |
+
device/ (Group)
|
| 114 |
+
excitation_lambda (float64) (Dataset)
|
| 115 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 116 |
+
imaging_rate (float64) (Dataset)
|
| 117 |
+
indicator (object) (Dataset)
|
| 118 |
+
location (object) (Dataset)
|
| 119 |
+
related_publications (1,) (object) (Dataset)
|
| 120 |
+
subject/ (Group)
|
| 121 |
+
age (object) (Dataset)
|
| 122 |
+
date_of_birth (object) (Dataset)
|
| 123 |
+
genotype (object) (Dataset)
|
| 124 |
+
sex (object) (Dataset)
|
| 125 |
+
species (object) (Dataset)
|
| 126 |
+
identifier (object) (Dataset)
|
| 127 |
+
processing/ (Group)
|
| 128 |
+
Condition_C1/ (Group)
|
| 129 |
+
cell_types/ (Group)
|
| 130 |
+
cluster_id (138,) (int64) (Dataset)
|
| 131 |
+
condition (138,) (object) (Dataset)
|
| 132 |
+
group_id (138,) (int64) (Dataset)
|
| 133 |
+
id (138,) (int64) (Dataset)
|
| 134 |
+
preproc_bar (138, 32) (float64) (Dataset)
|
| 135 |
+
preproc_chirp (138, 249) (float64) (Dataset)
|
| 136 |
+
prob_class (138,) (float64) (Dataset)
|
| 137 |
+
prob_cluster (138,) (float64) (Dataset)
|
| 138 |
+
prob_group (138,) (float64) (Dataset)
|
| 139 |
+
prob_supergroup (138,) (float64) (Dataset)
|
| 140 |
+
probs_per_cluster (138, 75) (float64) (Dataset)
|
| 141 |
+
roi_id (138,) (int64) (Dataset)
|
| 142 |
+
roi_table_link (138,) (int64) (Dataset)
|
| 143 |
+
supergroup (138,) (object) (Dataset)
|
| 144 |
+
chirp_60Hz_average/ (Group)
|
| 145 |
+
data (1982, 138) (float64) (Dataset)
|
| 146 |
+
timestamps (1982,) (float64) (Dataset)
|
| 147 |
+
chirp_8Hz_average/ (Group)
|
| 148 |
+
data (259, 138) (float64) (Dataset)
|
| 149 |
+
timestamps (259,) (float64) (Dataset)
|
| 150 |
+
chirp_features/ (Group)
|
| 151 |
+
chirp_on_off_index (138,) (float64) (Dataset)
|
| 152 |
+
chirp_pres_qidx (138,) (float64) (Dataset)
|
| 153 |
+
chirp_qidx (138,) (float64) (Dataset)
|
| 154 |
+
chirp_transience_index (138,) (float64) (Dataset)
|
| 155 |
+
id (138,) (int64) (Dataset)
|
| 156 |
+
roi_id (138,) (int64) (Dataset)
|
| 157 |
+
roi_table_link (138,) (int64) (Dataset)
|
| 158 |
+
chirp_preprocessed_traces/ (Group)
|
| 159 |
+
data (1456, 138) (float64) (Dataset)
|
| 160 |
+
timestamps (1456,) (float64) (Dataset)
|
| 161 |
+
chirp_snippets/ (Group)
|
| 162 |
+
data (259, 138, 5) (float64) (Dataset)
|
| 163 |
+
timestamps (259,) (float64) (Dataset)
|
| 164 |
+
chirp_snippets_t0/ (Group)
|
| 165 |
+
id (1,) (int64) (Dataset)
|
| 166 |
+
snippets_t0_array (1, 5, 138) (float64) (Dataset)
|
| 167 |
+
chirp_triggertimes_snippets/ (Group)
|
| 168 |
+
data (2, 138, 5) (float64) (Dataset)
|
| 169 |
+
starting_time (float64) (Dataset)
|
| 170 |
+
movingbar_features/ (Group)
|
| 171 |
+
bar_ds_index (138,) (float64) (Dataset)
|
| 172 |
+
bar_ds_pvalue (138,) (float64) (Dataset)
|
| 173 |
+
bar_os_index (138,) (float64) (Dataset)
|
| 174 |
+
bar_os_pvalue (138,) (float64) (Dataset)
|
| 175 |
+
bar_pref_dir (138,) (float64) (Dataset)
|
| 176 |
+
bar_pref_or (138,) (float64) (Dataset)
|
| 177 |
+
bar_pres_qidx (138,) (float64) (Dataset)
|
| 178 |
+
bar_qidx (138,) (float64) (Dataset)
|
| 179 |
+
id (138,) (int64) (Dataset)
|
| 180 |
+
roi_id (138,) (int64) (Dataset)
|
| 181 |
+
roi_table_link (138,) (int64) (Dataset)
|
| 182 |
+
movingbar_preprocessed_traces/ (Group)
|
| 183 |
+
data (920, 138) (float64) (Dataset)
|
| 184 |
+
timestamps (920,) (float64) (Dataset)
|
| 185 |
+
movingbar_snippets/ (Group)
|
| 186 |
+
data (33, 138, 24) (float32) (Dataset)
|
| 187 |
+
timestamps (33,) (float64) (Dataset)
|
| 188 |
+
movingbar_snippets_t0/ (Group)
|
| 189 |
+
id (1,) (int64) (Dataset)
|
| 190 |
+
snippets_t0_array (1, 24, 138) (float64) (Dataset)
|
| 191 |
+
movingbar_triggertimes_snippets/ (Group)
|
| 192 |
+
data (1, 138, 24) (float32) (Dataset)
|
| 193 |
+
starting_time (float64) (Dataset)
|
| 194 |
+
noise_preprocessed_traces/ (Group)
|
| 195 |
+
data (2520, 138) (float64) (Dataset)
|
| 196 |
+
timestamps (2520,) (float64) (Dataset)
|
| 197 |
+
receptive_fields/ (Group)
|
| 198 |
+
center_index (87,) (float64) (Dataset)
|
| 199 |
+
condition (87,) (object) (Dataset)
|
| 200 |
+
id (87,) (int64) (Dataset)
|
| 201 |
+
polarity (87,) (int64) (Dataset)
|
| 202 |
+
relx_rf_roi_um (87,) (float64) (Dataset)
|
| 203 |
+
rely_rf_roi_um (87,) (float64) (Dataset)
|
| 204 |
+
rf_cdia_um (87,) (float64) (Dataset)
|
| 205 |
+
rf_gauss_qidx (87,) (float64) (Dataset)
|
| 206 |
+
roi_id (87,) (int64) (Dataset)
|
| 207 |
+
roi_table_link (87,) (int64) (Dataset)
|
| 208 |
+
split_qidx (87,) (float64) (Dataset)
|
| 209 |
+
srf (87, 20, 15) (float32) (Dataset)
|
| 210 |
+
surround_index (87,) (float64) (Dataset)
|
| 211 |
+
tRF_lag (87,) (float64) (Dataset)
|
| 212 |
+
tRF_tRI (87,) (float64) (Dataset)
|
| 213 |
+
tRF_width (87,) (float64) (Dataset)
|
| 214 |
+
trf (87, 40) (float32) (Dataset)
|
| 215 |
+
trf_peak_idxs (87, 5) (float64) (Dataset)
|
| 216 |
+
Condition_C2/ (Group)
|
| 217 |
+
cell_types/ (Group)
|
| 218 |
+
cluster_id (138,) (int64) (Dataset)
|
| 219 |
+
condition (138,) (object) (Dataset)
|
| 220 |
+
group_id (138,) (int64) (Dataset)
|
| 221 |
+
id (138,) (int64) (Dataset)
|
| 222 |
+
preproc_bar (138, 32) (float64) (Dataset)
|
| 223 |
+
preproc_chirp (138, 249) (float64) (Dataset)
|
| 224 |
+
prob_class (138,) (float64) (Dataset)
|
| 225 |
+
prob_cluster (138,) (float64) (Dataset)
|
| 226 |
+
prob_group (138,) (float64) (Dataset)
|
| 227 |
+
prob_supergroup (138,) (float64) (Dataset)
|
| 228 |
+
probs_per_cluster (138, 75) (float64) (Dataset)
|
| 229 |
+
roi_id (138,) (int64) (Dataset)
|
| 230 |
+
roi_table_link (138,) (int64) (Dataset)
|
| 231 |
+
supergroup (138,) (object) (Dataset)
|
| 232 |
+
chirp_60Hz_average/ (Group)
|
| 233 |
+
data (1982, 138) (float64) (Dataset)
|
| 234 |
+
timestamps (1982,) (float64) (Dataset)
|
| 235 |
+
chirp_8Hz_average/ (Group)
|
| 236 |
+
data (259, 138) (float64) (Dataset)
|
| 237 |
+
timestamps (259,) (float64) (Dataset)
|
| 238 |
+
chirp_features/ (Group)
|
| 239 |
+
chirp_on_off_index (138,) (float64) (Dataset)
|
| 240 |
+
chirp_pres_qidx (138,) (float64) (Dataset)
|
| 241 |
+
chirp_qidx (138,) (float64) (Dataset)
|
| 242 |
+
chirp_transience_index (138,) (float64) (Dataset)
|
| 243 |
+
id (138,) (int64) (Dataset)
|
| 244 |
+
roi_id (138,) (int64) (Dataset)
|
| 245 |
+
roi_table_link (138,) (int64) (Dataset)
|
| 246 |
+
chirp_preprocessed_traces/ (Group)
|
| 247 |
+
data (1457, 138) (float64) (Dataset)
|
| 248 |
+
timestamps (1457,) (float64) (Dataset)
|
| 249 |
+
chirp_snippets/ (Group)
|
| 250 |
+
data (259, 138, 5) (float64) (Dataset)
|
| 251 |
+
timestamps (259,) (float64) (Dataset)
|
| 252 |
+
chirp_snippets_t0/ (Group)
|
| 253 |
+
id (1,) (int64) (Dataset)
|
| 254 |
+
snippets_t0_array (1, 5, 138) (float64) (Dataset)
|
| 255 |
+
chirp_triggertimes_snippets/ (Group)
|
| 256 |
+
data (2, 138, 5) (float64) (Dataset)
|
| 257 |
+
starting_time (float64) (Dataset)
|
| 258 |
+
movingbar_features/ (Group)
|
| 259 |
+
bar_ds_index (138,) (float64) (Dataset)
|
| 260 |
+
bar_ds_pvalue (138,) (float64) (Dataset)
|
| 261 |
+
bar_os_index (138,) (float64) (Dataset)
|
| 262 |
+
bar_os_pvalue (138,) (float64) (Dataset)
|
| 263 |
+
bar_pref_dir (138,) (float64) (Dataset)
|
| 264 |
+
bar_pref_or (138,) (float64) (Dataset)
|
| 265 |
+
bar_pres_qidx (138,) (float64) (Dataset)
|
| 266 |
+
bar_qidx (138,) (float64) (Dataset)
|
| 267 |
+
id (138,) (int64) (Dataset)
|
| 268 |
+
roi_id (138,) (int64) (Dataset)
|
| 269 |
+
roi_table_link (138,) (int64) (Dataset)
|
| 270 |
+
movingbar_preprocessed_traces/ (Group)
|
| 271 |
+
data (932, 138) (float64) (Dataset)
|
| 272 |
+
timestamps (932,) (float64) (Dataset)
|
| 273 |
+
movingbar_snippets/ (Group)
|
| 274 |
+
data (33, 138, 24) (float32) (Dataset)
|
| 275 |
+
timestamps (33,) (float64) (Dataset)
|
| 276 |
+
movingbar_snippets_t0/ (Group)
|
| 277 |
+
id (1,) (int64) (Dataset)
|
| 278 |
+
snippets_t0_array (1, 24, 138) (float64) (Dataset)
|
| 279 |
+
movingbar_triggertimes_snippets/ (Group)
|
| 280 |
+
data (1, 138, 24) (float32) (Dataset)
|
| 281 |
+
starting_time (float64) (Dataset)
|
| 282 |
+
noise_preprocessed_traces/ (Group)
|
| 283 |
+
data (2471, 138) (float64) (Dataset)
|
| 284 |
+
timestamps (2471,) (float64) (Dataset)
|
| 285 |
+
receptive_fields/ (Group)
|
| 286 |
+
center_index (84,) (float64) (Dataset)
|
| 287 |
+
condition (84,) (object) (Dataset)
|
| 288 |
+
id (84,) (int64) (Dataset)
|
| 289 |
+
polarity (84,) (int64) (Dataset)
|
| 290 |
+
relx_rf_roi_um (84,) (float64) (Dataset)
|
| 291 |
+
rely_rf_roi_um (84,) (float64) (Dataset)
|
| 292 |
+
rf_cdia_um (84,) (float64) (Dataset)
|
| 293 |
+
rf_gauss_qidx (84,) (float64) (Dataset)
|
| 294 |
+
roi_id (84,) (int64) (Dataset)
|
| 295 |
+
roi_table_link (84,) (int64) (Dataset)
|
| 296 |
+
split_qidx (84,) (float64) (Dataset)
|
| 297 |
+
srf (84, 20, 15) (float32) (Dataset)
|
| 298 |
+
surround_index (84,) (float64) (Dataset)
|
| 299 |
+
tRF_lag (84,) (float64) (Dataset)
|
| 300 |
+
tRF_tRI (84,) (float64) (Dataset)
|
| 301 |
+
tRF_width (84,) (float64) (Dataset)
|
| 302 |
+
trf (84, 40) (float32) (Dataset)
|
| 303 |
+
trf_peak_idxs (84, 5) (float64) (Dataset)
|
| 304 |
+
rois/ (Group)
|
| 305 |
+
ImageSegmentation/ (Group)
|
| 306 |
+
ROI masks/ (Group)
|
| 307 |
+
id (138,) (int64) (Dataset)
|
| 308 |
+
image_mask (138, 64, 64) (bool) (Dataset)
|
| 309 |
+
imaging_plane/ (Group)
|
| 310 |
+
OpticalChannel/ (Group)
|
| 311 |
+
description (object) (Dataset)
|
| 312 |
+
emission_lambda (float64) (Dataset)
|
| 313 |
+
description (object) (Dataset)
|
| 314 |
+
device/ (Group)
|
| 315 |
+
excitation_lambda (float64) (Dataset)
|
| 316 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 317 |
+
imaging_rate (float64) (Dataset)
|
| 318 |
+
indicator (object) (Dataset)
|
| 319 |
+
location (object) (Dataset)
|
| 320 |
+
nxpix (138,) (int64) (Dataset)
|
| 321 |
+
nypix (138,) (int64) (Dataset)
|
| 322 |
+
reference_images/ (Group)
|
| 323 |
+
roi_ids (138,) (int64) (Dataset)
|
| 324 |
+
roi_sizes (138,) (int64) (Dataset)
|
| 325 |
+
roi_sizes_um2 (138,) (float64) (Dataset)
|
| 326 |
+
session_info/ (Group)
|
| 327 |
+
presentation_sequence/ (Group)
|
| 328 |
+
absolute_start_time (6,) (object) (Dataset)
|
| 329 |
+
id (6,) (int64) (Dataset)
|
| 330 |
+
presentation_order (6,) (int64) (Dataset)
|
| 331 |
+
relative_start_time (6,) (float64) (Dataset)
|
| 332 |
+
stimulus_condition (6,) (object) (Dataset)
|
| 333 |
+
spatial/ (Group)
|
| 334 |
+
spatial_locations/ (Group)
|
| 335 |
+
field_temporal_nasal_pos_um (138,) (float64) (Dataset)
|
| 336 |
+
field_ventral_dorsal_pos_um (138,) (float64) (Dataset)
|
| 337 |
+
id (138,) (int64) (Dataset)
|
| 338 |
+
roi_id (138,) (int64) (Dataset)
|
| 339 |
+
roi_table_link (138,) (int64) (Dataset)
|
| 340 |
+
temporal_nasal_pos_um (138,) (float64) (Dataset)
|
| 341 |
+
ventral_dorsal_pos_um (138,) (float64) (Dataset)
|
| 342 |
+
session_description (object) (Dataset)
|
| 343 |
+
session_start_time (object) (Dataset)
|
| 344 |
+
specifications/ (Group)
|
| 345 |
+
core/ (Group)
|
| 346 |
+
2.8.0/ (Group)
|
| 347 |
+
namespace (object) (Dataset)
|
| 348 |
+
nwb.base (object) (Dataset)
|
| 349 |
+
nwb.behavior (object) (Dataset)
|
| 350 |
+
nwb.device (object) (Dataset)
|
| 351 |
+
nwb.ecephys (object) (Dataset)
|
| 352 |
+
nwb.epoch (object) (Dataset)
|
| 353 |
+
nwb.file (object) (Dataset)
|
| 354 |
+
nwb.icephys (object) (Dataset)
|
| 355 |
+
nwb.image (object) (Dataset)
|
| 356 |
+
nwb.misc (object) (Dataset)
|
| 357 |
+
nwb.ogen (object) (Dataset)
|
| 358 |
+
nwb.ophys (object) (Dataset)
|
| 359 |
+
nwb.retinotopy (object) (Dataset)
|
| 360 |
+
experiment-metadata/ (Group)
|
| 361 |
+
0.1.0/ (Group)
|
| 362 |
+
experiment_metadata.extensions (object) (Dataset)
|
| 363 |
+
namespace (object) (Dataset)
|
| 364 |
+
hdmf-common/ (Group)
|
| 365 |
+
1.8.0/ (Group)
|
| 366 |
+
base (object) (Dataset)
|
| 367 |
+
namespace (object) (Dataset)
|
| 368 |
+
sparse (object) (Dataset)
|
| 369 |
+
table (object) (Dataset)
|
| 370 |
+
hdmf-experimental/ (Group)
|
| 371 |
+
0.5.0/ (Group)
|
| 372 |
+
experimental (object) (Dataset)
|
| 373 |
+
namespace (object) (Dataset)
|
| 374 |
+
resources (object) (Dataset)
|
| 375 |
+
stimulus/ (Group)
|
| 376 |
+
presentation/ (Group)
|
| 377 |
+
chirp_stimulus/ (Group)
|
| 378 |
+
data (0, 0, 0) (uint8) (Dataset)
|
| 379 |
+
dimension (2,) (int64) (Dataset)
|
| 380 |
+
external_file (1,) (object) (Dataset)
|
| 381 |
+
format (object) (Dataset)
|
| 382 |
+
starting_time (float64) (Dataset)
|
| 383 |
+
movingbar_stimulus/ (Group)
|
| 384 |
+
data (0, 0, 0) (uint8) (Dataset)
|
| 385 |
+
dimension (2,) (int64) (Dataset)
|
| 386 |
+
external_file (1,) (object) (Dataset)
|
| 387 |
+
format (object) (Dataset)
|
| 388 |
+
starting_time (float64) (Dataset)
|
| 389 |
+
noise_stimulus/ (Group)
|
| 390 |
+
data (0, 0, 0) (uint8) (Dataset)
|
| 391 |
+
dimension (2,) (int64) (Dataset)
|
| 392 |
+
external_file (1,) (object) (Dataset)
|
| 393 |
+
format (object) (Dataset)
|
| 394 |
+
starting_time (float64) (Dataset)
|
| 395 |
+
templates/ (Group)
|
| 396 |
+
timestamps_reference_time (object) (Dataset)
|
session_Experimenter_1_2022-07-14/experiment_2_RR/field_GCL0_structure.txt
ADDED
|
@@ -0,0 +1,318 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
| 1 |
+
NWB File Structure Report
|
| 2 |
+
========================
|
| 3 |
+
File: field_GCL0.nwb
|
| 4 |
+
Size: 47.58 MB
|
| 5 |
+
Generated: 2025-10-31 16:12:38
|
| 6 |
+
|
| 7 |
+
Structure:
|
| 8 |
+
----------
|
| 9 |
+
acquisition/ (Group)
|
| 10 |
+
TwoPhotonSeries_Cond_C1_chirp_Pres_1/ (Group)
|
| 11 |
+
data (1446, 64, 64) (uint16) (Dataset)
|
| 12 |
+
imaging_plane/ (Group)
|
| 13 |
+
OpticalChannel/ (Group)
|
| 14 |
+
description (object) (Dataset)
|
| 15 |
+
emission_lambda (float64) (Dataset)
|
| 16 |
+
description (object) (Dataset)
|
| 17 |
+
device/ (Group)
|
| 18 |
+
excitation_lambda (float64) (Dataset)
|
| 19 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 20 |
+
imaging_rate (float64) (Dataset)
|
| 21 |
+
indicator (object) (Dataset)
|
| 22 |
+
location (object) (Dataset)
|
| 23 |
+
timestamps (1446,) (float64) (Dataset)
|
| 24 |
+
TwoPhotonSeries_Cond_C1_movingbar_Pres_1/ (Group)
|
| 25 |
+
data (979, 64, 64) (uint16) (Dataset)
|
| 26 |
+
imaging_plane/ (Group)
|
| 27 |
+
OpticalChannel/ (Group)
|
| 28 |
+
description (object) (Dataset)
|
| 29 |
+
emission_lambda (float64) (Dataset)
|
| 30 |
+
description (object) (Dataset)
|
| 31 |
+
device/ (Group)
|
| 32 |
+
excitation_lambda (float64) (Dataset)
|
| 33 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 34 |
+
imaging_rate (float64) (Dataset)
|
| 35 |
+
indicator (object) (Dataset)
|
| 36 |
+
location (object) (Dataset)
|
| 37 |
+
timestamps (979,) (float64) (Dataset)
|
| 38 |
+
TwoPhotonSeries_Cond_D2_chirp_Pres_1/ (Group)
|
| 39 |
+
data (1433, 64, 64) (uint16) (Dataset)
|
| 40 |
+
imaging_plane/ (Group)
|
| 41 |
+
OpticalChannel/ (Group)
|
| 42 |
+
description (object) (Dataset)
|
| 43 |
+
emission_lambda (float64) (Dataset)
|
| 44 |
+
description (object) (Dataset)
|
| 45 |
+
device/ (Group)
|
| 46 |
+
excitation_lambda (float64) (Dataset)
|
| 47 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 48 |
+
imaging_rate (float64) (Dataset)
|
| 49 |
+
indicator (object) (Dataset)
|
| 50 |
+
location (object) (Dataset)
|
| 51 |
+
timestamps (1433,) (float64) (Dataset)
|
| 52 |
+
TwoPhotonSeries_Cond_D2_movingbar_Pres_1/ (Group)
|
| 53 |
+
data (937, 64, 64) (uint16) (Dataset)
|
| 54 |
+
imaging_plane/ (Group)
|
| 55 |
+
OpticalChannel/ (Group)
|
| 56 |
+
description (object) (Dataset)
|
| 57 |
+
emission_lambda (float64) (Dataset)
|
| 58 |
+
description (object) (Dataset)
|
| 59 |
+
device/ (Group)
|
| 60 |
+
excitation_lambda (float64) (Dataset)
|
| 61 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 62 |
+
imaging_rate (float64) (Dataset)
|
| 63 |
+
indicator (object) (Dataset)
|
| 64 |
+
location (object) (Dataset)
|
| 65 |
+
timestamps (937,) (float64) (Dataset)
|
| 66 |
+
analysis/ (Group)
|
| 67 |
+
file_create_date (1,) (object) (Dataset)
|
| 68 |
+
general/ (Group)
|
| 69 |
+
devices/ (Group)
|
| 70 |
+
Microscope/ (Group)
|
| 71 |
+
experiment_metadata/ (Group)
|
| 72 |
+
experiment_number (object) (Dataset)
|
| 73 |
+
eye (object) (Dataset)
|
| 74 |
+
preparation_orientation (object) (Dataset)
|
| 75 |
+
setup_id (object) (Dataset)
|
| 76 |
+
experimenter (1,) (object) (Dataset)
|
| 77 |
+
institution (object) (Dataset)
|
| 78 |
+
lab (object) (Dataset)
|
| 79 |
+
optophysiology/ (Group)
|
| 80 |
+
ImagingPlane/ (Group)
|
| 81 |
+
OpticalChannel/ (Group)
|
| 82 |
+
description (object) (Dataset)
|
| 83 |
+
emission_lambda (float64) (Dataset)
|
| 84 |
+
description (object) (Dataset)
|
| 85 |
+
device/ (Group)
|
| 86 |
+
excitation_lambda (float64) (Dataset)
|
| 87 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 88 |
+
imaging_rate (float64) (Dataset)
|
| 89 |
+
indicator (object) (Dataset)
|
| 90 |
+
location (object) (Dataset)
|
| 91 |
+
related_publications (1,) (object) (Dataset)
|
| 92 |
+
subject/ (Group)
|
| 93 |
+
age (object) (Dataset)
|
| 94 |
+
date_of_birth (object) (Dataset)
|
| 95 |
+
genotype (object) (Dataset)
|
| 96 |
+
sex (object) (Dataset)
|
| 97 |
+
species (object) (Dataset)
|
| 98 |
+
identifier (object) (Dataset)
|
| 99 |
+
processing/ (Group)
|
| 100 |
+
Condition_C1/ (Group)
|
| 101 |
+
cell_types/ (Group)
|
| 102 |
+
cluster_id (90,) (int64) (Dataset)
|
| 103 |
+
condition (90,) (object) (Dataset)
|
| 104 |
+
group_id (90,) (int64) (Dataset)
|
| 105 |
+
id (90,) (int64) (Dataset)
|
| 106 |
+
preproc_bar (90, 32) (float64) (Dataset)
|
| 107 |
+
preproc_chirp (90, 249) (float64) (Dataset)
|
| 108 |
+
prob_class (90,) (float64) (Dataset)
|
| 109 |
+
prob_cluster (90,) (float64) (Dataset)
|
| 110 |
+
prob_group (90,) (float64) (Dataset)
|
| 111 |
+
prob_supergroup (90,) (float64) (Dataset)
|
| 112 |
+
probs_per_cluster (90, 75) (float64) (Dataset)
|
| 113 |
+
roi_id (90,) (int64) (Dataset)
|
| 114 |
+
roi_table_link (90,) (int64) (Dataset)
|
| 115 |
+
supergroup (90,) (object) (Dataset)
|
| 116 |
+
chirp_60Hz_average/ (Group)
|
| 117 |
+
data (1982, 90) (float64) (Dataset)
|
| 118 |
+
timestamps (1982,) (float64) (Dataset)
|
| 119 |
+
chirp_8Hz_average/ (Group)
|
| 120 |
+
data (259, 90) (float64) (Dataset)
|
| 121 |
+
timestamps (259,) (float64) (Dataset)
|
| 122 |
+
chirp_features/ (Group)
|
| 123 |
+
chirp_on_off_index (90,) (float64) (Dataset)
|
| 124 |
+
chirp_pres_qidx (90,) (float64) (Dataset)
|
| 125 |
+
chirp_qidx (90,) (float64) (Dataset)
|
| 126 |
+
chirp_transience_index (90,) (float64) (Dataset)
|
| 127 |
+
id (90,) (int64) (Dataset)
|
| 128 |
+
roi_id (90,) (int64) (Dataset)
|
| 129 |
+
roi_table_link (90,) (int64) (Dataset)
|
| 130 |
+
chirp_preprocessed_traces/ (Group)
|
| 131 |
+
data (1446, 90) (float64) (Dataset)
|
| 132 |
+
timestamps (1446,) (float64) (Dataset)
|
| 133 |
+
chirp_snippets/ (Group)
|
| 134 |
+
data (259, 90, 5) (float64) (Dataset)
|
| 135 |
+
timestamps (259,) (float64) (Dataset)
|
| 136 |
+
chirp_snippets_t0/ (Group)
|
| 137 |
+
id (1,) (int64) (Dataset)
|
| 138 |
+
snippets_t0_array (1, 5, 90) (float64) (Dataset)
|
| 139 |
+
chirp_triggertimes_snippets/ (Group)
|
| 140 |
+
data (2, 90, 5) (float64) (Dataset)
|
| 141 |
+
starting_time (float64) (Dataset)
|
| 142 |
+
movingbar_features/ (Group)
|
| 143 |
+
bar_ds_index (90,) (float64) (Dataset)
|
| 144 |
+
bar_ds_pvalue (90,) (float64) (Dataset)
|
| 145 |
+
bar_os_index (90,) (float64) (Dataset)
|
| 146 |
+
bar_os_pvalue (90,) (float64) (Dataset)
|
| 147 |
+
bar_pref_dir (90,) (float64) (Dataset)
|
| 148 |
+
bar_pref_or (90,) (float64) (Dataset)
|
| 149 |
+
bar_pres_qidx (90,) (float64) (Dataset)
|
| 150 |
+
bar_qidx (90,) (float64) (Dataset)
|
| 151 |
+
id (90,) (int64) (Dataset)
|
| 152 |
+
roi_id (90,) (int64) (Dataset)
|
| 153 |
+
roi_table_link (90,) (int64) (Dataset)
|
| 154 |
+
movingbar_preprocessed_traces/ (Group)
|
| 155 |
+
data (979, 90) (float64) (Dataset)
|
| 156 |
+
timestamps (979,) (float64) (Dataset)
|
| 157 |
+
movingbar_snippets/ (Group)
|
| 158 |
+
data (33, 90, 24) (float32) (Dataset)
|
| 159 |
+
timestamps (33,) (float64) (Dataset)
|
| 160 |
+
movingbar_snippets_t0/ (Group)
|
| 161 |
+
id (1,) (int64) (Dataset)
|
| 162 |
+
snippets_t0_array (1, 24, 90) (float64) (Dataset)
|
| 163 |
+
movingbar_triggertimes_snippets/ (Group)
|
| 164 |
+
data (1, 90, 24) (float32) (Dataset)
|
| 165 |
+
starting_time (float64) (Dataset)
|
| 166 |
+
Condition_D2/ (Group)
|
| 167 |
+
cell_types/ (Group)
|
| 168 |
+
cluster_id (90,) (int64) (Dataset)
|
| 169 |
+
condition (90,) (object) (Dataset)
|
| 170 |
+
group_id (90,) (int64) (Dataset)
|
| 171 |
+
id (90,) (int64) (Dataset)
|
| 172 |
+
preproc_bar (90, 32) (float64) (Dataset)
|
| 173 |
+
preproc_chirp (90, 249) (float64) (Dataset)
|
| 174 |
+
prob_class (90,) (float64) (Dataset)
|
| 175 |
+
prob_cluster (90,) (float64) (Dataset)
|
| 176 |
+
prob_group (90,) (float64) (Dataset)
|
| 177 |
+
prob_supergroup (90,) (float64) (Dataset)
|
| 178 |
+
probs_per_cluster (90, 75) (float64) (Dataset)
|
| 179 |
+
roi_id (90,) (int64) (Dataset)
|
| 180 |
+
roi_table_link (90,) (int64) (Dataset)
|
| 181 |
+
supergroup (90,) (object) (Dataset)
|
| 182 |
+
chirp_60Hz_average/ (Group)
|
| 183 |
+
data (1982, 90) (float64) (Dataset)
|
| 184 |
+
timestamps (1982,) (float64) (Dataset)
|
| 185 |
+
chirp_8Hz_average/ (Group)
|
| 186 |
+
data (259, 90) (float64) (Dataset)
|
| 187 |
+
timestamps (259,) (float64) (Dataset)
|
| 188 |
+
chirp_features/ (Group)
|
| 189 |
+
chirp_on_off_index (90,) (float64) (Dataset)
|
| 190 |
+
chirp_pres_qidx (90,) (float64) (Dataset)
|
| 191 |
+
chirp_qidx (90,) (float64) (Dataset)
|
| 192 |
+
chirp_transience_index (90,) (float64) (Dataset)
|
| 193 |
+
id (90,) (int64) (Dataset)
|
| 194 |
+
roi_id (90,) (int64) (Dataset)
|
| 195 |
+
roi_table_link (90,) (int64) (Dataset)
|
| 196 |
+
chirp_preprocessed_traces/ (Group)
|
| 197 |
+
data (1433, 90) (float64) (Dataset)
|
| 198 |
+
timestamps (1433,) (float64) (Dataset)
|
| 199 |
+
chirp_snippets/ (Group)
|
| 200 |
+
data (259, 90, 5) (float64) (Dataset)
|
| 201 |
+
timestamps (259,) (float64) (Dataset)
|
| 202 |
+
chirp_snippets_t0/ (Group)
|
| 203 |
+
id (1,) (int64) (Dataset)
|
| 204 |
+
snippets_t0_array (1, 5, 90) (float64) (Dataset)
|
| 205 |
+
chirp_triggertimes_snippets/ (Group)
|
| 206 |
+
data (2, 90, 5) (float64) (Dataset)
|
| 207 |
+
starting_time (float64) (Dataset)
|
| 208 |
+
movingbar_features/ (Group)
|
| 209 |
+
bar_ds_index (90,) (float64) (Dataset)
|
| 210 |
+
bar_ds_pvalue (90,) (float64) (Dataset)
|
| 211 |
+
bar_os_index (90,) (float64) (Dataset)
|
| 212 |
+
bar_os_pvalue (90,) (float64) (Dataset)
|
| 213 |
+
bar_pref_dir (90,) (float64) (Dataset)
|
| 214 |
+
bar_pref_or (90,) (float64) (Dataset)
|
| 215 |
+
bar_pres_qidx (90,) (float64) (Dataset)
|
| 216 |
+
bar_qidx (90,) (float64) (Dataset)
|
| 217 |
+
id (90,) (int64) (Dataset)
|
| 218 |
+
roi_id (90,) (int64) (Dataset)
|
| 219 |
+
roi_table_link (90,) (int64) (Dataset)
|
| 220 |
+
movingbar_preprocessed_traces/ (Group)
|
| 221 |
+
data (937, 90) (float64) (Dataset)
|
| 222 |
+
timestamps (937,) (float64) (Dataset)
|
| 223 |
+
movingbar_snippets/ (Group)
|
| 224 |
+
data (33, 90, 24) (float32) (Dataset)
|
| 225 |
+
timestamps (33,) (float64) (Dataset)
|
| 226 |
+
movingbar_snippets_t0/ (Group)
|
| 227 |
+
id (1,) (int64) (Dataset)
|
| 228 |
+
snippets_t0_array (1, 24, 90) (float64) (Dataset)
|
| 229 |
+
movingbar_triggertimes_snippets/ (Group)
|
| 230 |
+
data (1, 90, 24) (float32) (Dataset)
|
| 231 |
+
starting_time (float64) (Dataset)
|
| 232 |
+
rois/ (Group)
|
| 233 |
+
ImageSegmentation/ (Group)
|
| 234 |
+
ROI masks/ (Group)
|
| 235 |
+
id (90,) (int64) (Dataset)
|
| 236 |
+
image_mask (90, 64, 64) (bool) (Dataset)
|
| 237 |
+
imaging_plane/ (Group)
|
| 238 |
+
OpticalChannel/ (Group)
|
| 239 |
+
description (object) (Dataset)
|
| 240 |
+
emission_lambda (float64) (Dataset)
|
| 241 |
+
description (object) (Dataset)
|
| 242 |
+
device/ (Group)
|
| 243 |
+
excitation_lambda (float64) (Dataset)
|
| 244 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 245 |
+
imaging_rate (float64) (Dataset)
|
| 246 |
+
indicator (object) (Dataset)
|
| 247 |
+
location (object) (Dataset)
|
| 248 |
+
nxpix (90,) (int64) (Dataset)
|
| 249 |
+
nypix (90,) (int64) (Dataset)
|
| 250 |
+
reference_images/ (Group)
|
| 251 |
+
roi_ids (90,) (int64) (Dataset)
|
| 252 |
+
roi_sizes (90,) (int64) (Dataset)
|
| 253 |
+
roi_sizes_um2 (90,) (float64) (Dataset)
|
| 254 |
+
session_info/ (Group)
|
| 255 |
+
presentation_sequence/ (Group)
|
| 256 |
+
absolute_start_time (4,) (object) (Dataset)
|
| 257 |
+
id (4,) (int64) (Dataset)
|
| 258 |
+
presentation_order (4,) (int64) (Dataset)
|
| 259 |
+
relative_start_time (4,) (float64) (Dataset)
|
| 260 |
+
stimulus_condition (4,) (object) (Dataset)
|
| 261 |
+
spatial/ (Group)
|
| 262 |
+
spatial_locations/ (Group)
|
| 263 |
+
field_temporal_nasal_pos_um (90,) (float64) (Dataset)
|
| 264 |
+
field_ventral_dorsal_pos_um (90,) (float64) (Dataset)
|
| 265 |
+
id (90,) (int64) (Dataset)
|
| 266 |
+
roi_id (90,) (int64) (Dataset)
|
| 267 |
+
roi_table_link (90,) (int64) (Dataset)
|
| 268 |
+
temporal_nasal_pos_um (90,) (float64) (Dataset)
|
| 269 |
+
ventral_dorsal_pos_um (90,) (float64) (Dataset)
|
| 270 |
+
session_description (object) (Dataset)
|
| 271 |
+
session_start_time (object) (Dataset)
|
| 272 |
+
specifications/ (Group)
|
| 273 |
+
core/ (Group)
|
| 274 |
+
2.8.0/ (Group)
|
| 275 |
+
namespace (object) (Dataset)
|
| 276 |
+
nwb.base (object) (Dataset)
|
| 277 |
+
nwb.behavior (object) (Dataset)
|
| 278 |
+
nwb.device (object) (Dataset)
|
| 279 |
+
nwb.ecephys (object) (Dataset)
|
| 280 |
+
nwb.epoch (object) (Dataset)
|
| 281 |
+
nwb.file (object) (Dataset)
|
| 282 |
+
nwb.icephys (object) (Dataset)
|
| 283 |
+
nwb.image (object) (Dataset)
|
| 284 |
+
nwb.misc (object) (Dataset)
|
| 285 |
+
nwb.ogen (object) (Dataset)
|
| 286 |
+
nwb.ophys (object) (Dataset)
|
| 287 |
+
nwb.retinotopy (object) (Dataset)
|
| 288 |
+
experiment-metadata/ (Group)
|
| 289 |
+
0.1.0/ (Group)
|
| 290 |
+
experiment_metadata.extensions (object) (Dataset)
|
| 291 |
+
namespace (object) (Dataset)
|
| 292 |
+
hdmf-common/ (Group)
|
| 293 |
+
1.8.0/ (Group)
|
| 294 |
+
base (object) (Dataset)
|
| 295 |
+
namespace (object) (Dataset)
|
| 296 |
+
sparse (object) (Dataset)
|
| 297 |
+
table (object) (Dataset)
|
| 298 |
+
hdmf-experimental/ (Group)
|
| 299 |
+
0.5.0/ (Group)
|
| 300 |
+
experimental (object) (Dataset)
|
| 301 |
+
namespace (object) (Dataset)
|
| 302 |
+
resources (object) (Dataset)
|
| 303 |
+
stimulus/ (Group)
|
| 304 |
+
presentation/ (Group)
|
| 305 |
+
chirp_stimulus/ (Group)
|
| 306 |
+
data (0, 0, 0) (uint8) (Dataset)
|
| 307 |
+
dimension (2,) (int64) (Dataset)
|
| 308 |
+
external_file (1,) (object) (Dataset)
|
| 309 |
+
format (object) (Dataset)
|
| 310 |
+
starting_time (float64) (Dataset)
|
| 311 |
+
movingbar_stimulus/ (Group)
|
| 312 |
+
data (0, 0, 0) (uint8) (Dataset)
|
| 313 |
+
dimension (2,) (int64) (Dataset)
|
| 314 |
+
external_file (1,) (object) (Dataset)
|
| 315 |
+
format (object) (Dataset)
|
| 316 |
+
starting_time (float64) (Dataset)
|
| 317 |
+
templates/ (Group)
|
| 318 |
+
timestamps_reference_time (object) (Dataset)
|
session_Experimenter_2_2022-02-10/experiment_1_RR/field_RGC0_structure.txt
ADDED
|
@@ -0,0 +1,204 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
NWB File Structure Report
|
| 2 |
+
========================
|
| 3 |
+
File: field_RGC0.nwb
|
| 4 |
+
Size: 23.40 MB
|
| 5 |
+
Generated: 2025-10-31 16:13:40
|
| 6 |
+
|
| 7 |
+
Structure:
|
| 8 |
+
----------
|
| 9 |
+
acquisition/ (Group)
|
| 10 |
+
TwoPhotonSeries_Cond_control_chirp_Pres_1/ (Group)
|
| 11 |
+
data (1577, 64, 64) (uint16) (Dataset)
|
| 12 |
+
imaging_plane/ (Group)
|
| 13 |
+
OpticalChannel/ (Group)
|
| 14 |
+
description (object) (Dataset)
|
| 15 |
+
emission_lambda (float64) (Dataset)
|
| 16 |
+
description (object) (Dataset)
|
| 17 |
+
device/ (Group)
|
| 18 |
+
excitation_lambda (float64) (Dataset)
|
| 19 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 20 |
+
imaging_rate (float64) (Dataset)
|
| 21 |
+
indicator (object) (Dataset)
|
| 22 |
+
location (object) (Dataset)
|
| 23 |
+
timestamps (1577,) (float64) (Dataset)
|
| 24 |
+
TwoPhotonSeries_Cond_control_movingbar_Pres_1/ (Group)
|
| 25 |
+
data (952, 64, 64) (uint16) (Dataset)
|
| 26 |
+
imaging_plane/ (Group)
|
| 27 |
+
OpticalChannel/ (Group)
|
| 28 |
+
description (object) (Dataset)
|
| 29 |
+
emission_lambda (float64) (Dataset)
|
| 30 |
+
description (object) (Dataset)
|
| 31 |
+
device/ (Group)
|
| 32 |
+
excitation_lambda (float64) (Dataset)
|
| 33 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 34 |
+
imaging_rate (float64) (Dataset)
|
| 35 |
+
indicator (object) (Dataset)
|
| 36 |
+
location (object) (Dataset)
|
| 37 |
+
timestamps (952,) (float64) (Dataset)
|
| 38 |
+
analysis/ (Group)
|
| 39 |
+
file_create_date (1,) (object) (Dataset)
|
| 40 |
+
general/ (Group)
|
| 41 |
+
devices/ (Group)
|
| 42 |
+
Microscope/ (Group)
|
| 43 |
+
experiment_metadata/ (Group)
|
| 44 |
+
experiment_number (object) (Dataset)
|
| 45 |
+
eye (object) (Dataset)
|
| 46 |
+
preparation_orientation (object) (Dataset)
|
| 47 |
+
setup_id (object) (Dataset)
|
| 48 |
+
experimenter (1,) (object) (Dataset)
|
| 49 |
+
institution (object) (Dataset)
|
| 50 |
+
lab (object) (Dataset)
|
| 51 |
+
optophysiology/ (Group)
|
| 52 |
+
ImagingPlane/ (Group)
|
| 53 |
+
OpticalChannel/ (Group)
|
| 54 |
+
description (object) (Dataset)
|
| 55 |
+
emission_lambda (float64) (Dataset)
|
| 56 |
+
description (object) (Dataset)
|
| 57 |
+
device/ (Group)
|
| 58 |
+
excitation_lambda (float64) (Dataset)
|
| 59 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 60 |
+
imaging_rate (float64) (Dataset)
|
| 61 |
+
indicator (object) (Dataset)
|
| 62 |
+
location (object) (Dataset)
|
| 63 |
+
related_publications (1,) (object) (Dataset)
|
| 64 |
+
subject/ (Group)
|
| 65 |
+
age (object) (Dataset)
|
| 66 |
+
date_of_birth (object) (Dataset)
|
| 67 |
+
genotype (object) (Dataset)
|
| 68 |
+
sex (object) (Dataset)
|
| 69 |
+
species (object) (Dataset)
|
| 70 |
+
identifier (object) (Dataset)
|
| 71 |
+
processing/ (Group)
|
| 72 |
+
Condition_control/ (Group)
|
| 73 |
+
cell_types/ (Group)
|
| 74 |
+
cluster_id (79,) (int64) (Dataset)
|
| 75 |
+
condition (79,) (object) (Dataset)
|
| 76 |
+
group_id (79,) (int64) (Dataset)
|
| 77 |
+
id (79,) (int64) (Dataset)
|
| 78 |
+
preproc_bar (79, 32) (float64) (Dataset)
|
| 79 |
+
preproc_chirp (79, 249) (float64) (Dataset)
|
| 80 |
+
prob_class (79,) (float64) (Dataset)
|
| 81 |
+
prob_cluster (79,) (float64) (Dataset)
|
| 82 |
+
prob_group (79,) (float64) (Dataset)
|
| 83 |
+
prob_supergroup (79,) (float64) (Dataset)
|
| 84 |
+
probs_per_cluster (79, 75) (float64) (Dataset)
|
| 85 |
+
roi_id (79,) (int64) (Dataset)
|
| 86 |
+
roi_table_link (79,) (int64) (Dataset)
|
| 87 |
+
supergroup (79,) (object) (Dataset)
|
| 88 |
+
chirp_60Hz_average/ (Group)
|
| 89 |
+
data (1982, 79) (float64) (Dataset)
|
| 90 |
+
timestamps (1982,) (float64) (Dataset)
|
| 91 |
+
chirp_8Hz_average/ (Group)
|
| 92 |
+
data (259, 79) (float64) (Dataset)
|
| 93 |
+
timestamps (259,) (float64) (Dataset)
|
| 94 |
+
chirp_features/ (Group)
|
| 95 |
+
chirp_on_off_index (79,) (float64) (Dataset)
|
| 96 |
+
chirp_pres_qidx (79,) (float64) (Dataset)
|
| 97 |
+
chirp_qidx (79,) (float64) (Dataset)
|
| 98 |
+
chirp_transience_index (79,) (float64) (Dataset)
|
| 99 |
+
id (79,) (int64) (Dataset)
|
| 100 |
+
roi_id (79,) (int64) (Dataset)
|
| 101 |
+
roi_table_link (79,) (int64) (Dataset)
|
| 102 |
+
chirp_preprocessed_traces/ (Group)
|
| 103 |
+
data (1577, 79) (float32) (Dataset)
|
| 104 |
+
timestamps (1577,) (float64) (Dataset)
|
| 105 |
+
chirp_snippets/ (Group)
|
| 106 |
+
data (259, 79, 5) (float32) (Dataset)
|
| 107 |
+
timestamps (259,) (float64) (Dataset)
|
| 108 |
+
chirp_snippets_t0/ (Group)
|
| 109 |
+
id (1,) (int64) (Dataset)
|
| 110 |
+
snippets_t0_array (1, 5, 79) (float64) (Dataset)
|
| 111 |
+
chirp_triggertimes_snippets/ (Group)
|
| 112 |
+
data (2, 79, 5) (float32) (Dataset)
|
| 113 |
+
starting_time (float64) (Dataset)
|
| 114 |
+
movingbar_features/ (Group)
|
| 115 |
+
bar_ds_index (79,) (float64) (Dataset)
|
| 116 |
+
bar_ds_pvalue (79,) (float64) (Dataset)
|
| 117 |
+
bar_os_index (79,) (float64) (Dataset)
|
| 118 |
+
bar_os_pvalue (79,) (float64) (Dataset)
|
| 119 |
+
bar_pref_dir (79,) (float64) (Dataset)
|
| 120 |
+
bar_pref_or (79,) (float64) (Dataset)
|
| 121 |
+
bar_pres_qidx (79,) (float64) (Dataset)
|
| 122 |
+
bar_qidx (79,) (float64) (Dataset)
|
| 123 |
+
id (79,) (int64) (Dataset)
|
| 124 |
+
roi_id (79,) (int64) (Dataset)
|
| 125 |
+
roi_table_link (79,) (int64) (Dataset)
|
| 126 |
+
movingbar_preprocessed_traces/ (Group)
|
| 127 |
+
data (952, 79) (float32) (Dataset)
|
| 128 |
+
timestamps (952,) (float64) (Dataset)
|
| 129 |
+
movingbar_snippets/ (Group)
|
| 130 |
+
data (33, 79, 24) (float32) (Dataset)
|
| 131 |
+
timestamps (33,) (float64) (Dataset)
|
| 132 |
+
movingbar_snippets_t0/ (Group)
|
| 133 |
+
id (1,) (int64) (Dataset)
|
| 134 |
+
snippets_t0_array (1, 24, 79) (float64) (Dataset)
|
| 135 |
+
movingbar_triggertimes_snippets/ (Group)
|
| 136 |
+
data (1, 79, 24) (float32) (Dataset)
|
| 137 |
+
starting_time (float64) (Dataset)
|
| 138 |
+
rois/ (Group)
|
| 139 |
+
ImageSegmentation/ (Group)
|
| 140 |
+
ROI masks/ (Group)
|
| 141 |
+
id (79,) (int64) (Dataset)
|
| 142 |
+
image_mask (79, 64, 64) (bool) (Dataset)
|
| 143 |
+
imaging_plane/ (Group)
|
| 144 |
+
OpticalChannel/ (Group)
|
| 145 |
+
description (object) (Dataset)
|
| 146 |
+
emission_lambda (float64) (Dataset)
|
| 147 |
+
description (object) (Dataset)
|
| 148 |
+
device/ (Group)
|
| 149 |
+
excitation_lambda (float64) (Dataset)
|
| 150 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 151 |
+
imaging_rate (float64) (Dataset)
|
| 152 |
+
indicator (object) (Dataset)
|
| 153 |
+
location (object) (Dataset)
|
| 154 |
+
nxpix (79,) (int64) (Dataset)
|
| 155 |
+
nypix (79,) (int64) (Dataset)
|
| 156 |
+
reference_images/ (Group)
|
| 157 |
+
roi_ids (79,) (int64) (Dataset)
|
| 158 |
+
roi_sizes (79,) (int64) (Dataset)
|
| 159 |
+
roi_sizes_um2 (79,) (float64) (Dataset)
|
| 160 |
+
session_info/ (Group)
|
| 161 |
+
presentation_sequence/ (Group)
|
| 162 |
+
absolute_start_time (2,) (object) (Dataset)
|
| 163 |
+
id (2,) (int64) (Dataset)
|
| 164 |
+
presentation_order (2,) (int64) (Dataset)
|
| 165 |
+
relative_start_time (2,) (float64) (Dataset)
|
| 166 |
+
stimulus_condition (2,) (object) (Dataset)
|
| 167 |
+
spatial/ (Group)
|
| 168 |
+
session_description (object) (Dataset)
|
| 169 |
+
session_start_time (object) (Dataset)
|
| 170 |
+
specifications/ (Group)
|
| 171 |
+
core/ (Group)
|
| 172 |
+
2.8.0/ (Group)
|
| 173 |
+
namespace (object) (Dataset)
|
| 174 |
+
nwb.base (object) (Dataset)
|
| 175 |
+
nwb.behavior (object) (Dataset)
|
| 176 |
+
nwb.device (object) (Dataset)
|
| 177 |
+
nwb.ecephys (object) (Dataset)
|
| 178 |
+
nwb.epoch (object) (Dataset)
|
| 179 |
+
nwb.file (object) (Dataset)
|
| 180 |
+
nwb.icephys (object) (Dataset)
|
| 181 |
+
nwb.image (object) (Dataset)
|
| 182 |
+
nwb.misc (object) (Dataset)
|
| 183 |
+
nwb.ogen (object) (Dataset)
|
| 184 |
+
nwb.ophys (object) (Dataset)
|
| 185 |
+
nwb.retinotopy (object) (Dataset)
|
| 186 |
+
experiment-metadata/ (Group)
|
| 187 |
+
0.1.0/ (Group)
|
| 188 |
+
experiment_metadata.extensions (object) (Dataset)
|
| 189 |
+
namespace (object) (Dataset)
|
| 190 |
+
hdmf-common/ (Group)
|
| 191 |
+
1.8.0/ (Group)
|
| 192 |
+
base (object) (Dataset)
|
| 193 |
+
namespace (object) (Dataset)
|
| 194 |
+
sparse (object) (Dataset)
|
| 195 |
+
table (object) (Dataset)
|
| 196 |
+
hdmf-experimental/ (Group)
|
| 197 |
+
0.5.0/ (Group)
|
| 198 |
+
experimental (object) (Dataset)
|
| 199 |
+
namespace (object) (Dataset)
|
| 200 |
+
resources (object) (Dataset)
|
| 201 |
+
stimulus/ (Group)
|
| 202 |
+
presentation/ (Group)
|
| 203 |
+
templates/ (Group)
|
| 204 |
+
timestamps_reference_time (object) (Dataset)
|
session_Experimenter_2_2022-02-10/experiment_1_RR/field_RGC1_structure.txt
ADDED
|
@@ -0,0 +1,204 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
NWB File Structure Report
|
| 2 |
+
========================
|
| 3 |
+
File: field_RGC1.nwb
|
| 4 |
+
Size: 23.12 MB
|
| 5 |
+
Generated: 2025-10-31 16:13:43
|
| 6 |
+
|
| 7 |
+
Structure:
|
| 8 |
+
----------
|
| 9 |
+
acquisition/ (Group)
|
| 10 |
+
TwoPhotonSeries_Cond_control_chirp_Pres_1/ (Group)
|
| 11 |
+
data (1465, 64, 64) (uint16) (Dataset)
|
| 12 |
+
imaging_plane/ (Group)
|
| 13 |
+
OpticalChannel/ (Group)
|
| 14 |
+
description (object) (Dataset)
|
| 15 |
+
emission_lambda (float64) (Dataset)
|
| 16 |
+
description (object) (Dataset)
|
| 17 |
+
device/ (Group)
|
| 18 |
+
excitation_lambda (float64) (Dataset)
|
| 19 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 20 |
+
imaging_rate (float64) (Dataset)
|
| 21 |
+
indicator (object) (Dataset)
|
| 22 |
+
location (object) (Dataset)
|
| 23 |
+
timestamps (1465,) (float64) (Dataset)
|
| 24 |
+
TwoPhotonSeries_Cond_control_movingbar_Pres_1/ (Group)
|
| 25 |
+
data (1108, 64, 64) (uint16) (Dataset)
|
| 26 |
+
imaging_plane/ (Group)
|
| 27 |
+
OpticalChannel/ (Group)
|
| 28 |
+
description (object) (Dataset)
|
| 29 |
+
emission_lambda (float64) (Dataset)
|
| 30 |
+
description (object) (Dataset)
|
| 31 |
+
device/ (Group)
|
| 32 |
+
excitation_lambda (float64) (Dataset)
|
| 33 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 34 |
+
imaging_rate (float64) (Dataset)
|
| 35 |
+
indicator (object) (Dataset)
|
| 36 |
+
location (object) (Dataset)
|
| 37 |
+
timestamps (1108,) (float64) (Dataset)
|
| 38 |
+
analysis/ (Group)
|
| 39 |
+
file_create_date (1,) (object) (Dataset)
|
| 40 |
+
general/ (Group)
|
| 41 |
+
devices/ (Group)
|
| 42 |
+
Microscope/ (Group)
|
| 43 |
+
experiment_metadata/ (Group)
|
| 44 |
+
experiment_number (object) (Dataset)
|
| 45 |
+
eye (object) (Dataset)
|
| 46 |
+
preparation_orientation (object) (Dataset)
|
| 47 |
+
setup_id (object) (Dataset)
|
| 48 |
+
experimenter (1,) (object) (Dataset)
|
| 49 |
+
institution (object) (Dataset)
|
| 50 |
+
lab (object) (Dataset)
|
| 51 |
+
optophysiology/ (Group)
|
| 52 |
+
ImagingPlane/ (Group)
|
| 53 |
+
OpticalChannel/ (Group)
|
| 54 |
+
description (object) (Dataset)
|
| 55 |
+
emission_lambda (float64) (Dataset)
|
| 56 |
+
description (object) (Dataset)
|
| 57 |
+
device/ (Group)
|
| 58 |
+
excitation_lambda (float64) (Dataset)
|
| 59 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 60 |
+
imaging_rate (float64) (Dataset)
|
| 61 |
+
indicator (object) (Dataset)
|
| 62 |
+
location (object) (Dataset)
|
| 63 |
+
related_publications (1,) (object) (Dataset)
|
| 64 |
+
subject/ (Group)
|
| 65 |
+
age (object) (Dataset)
|
| 66 |
+
date_of_birth (object) (Dataset)
|
| 67 |
+
genotype (object) (Dataset)
|
| 68 |
+
sex (object) (Dataset)
|
| 69 |
+
species (object) (Dataset)
|
| 70 |
+
identifier (object) (Dataset)
|
| 71 |
+
processing/ (Group)
|
| 72 |
+
Condition_control/ (Group)
|
| 73 |
+
cell_types/ (Group)
|
| 74 |
+
cluster_id (64,) (int64) (Dataset)
|
| 75 |
+
condition (64,) (object) (Dataset)
|
| 76 |
+
group_id (64,) (int64) (Dataset)
|
| 77 |
+
id (64,) (int64) (Dataset)
|
| 78 |
+
preproc_bar (64, 32) (float64) (Dataset)
|
| 79 |
+
preproc_chirp (64, 249) (float64) (Dataset)
|
| 80 |
+
prob_class (64,) (float64) (Dataset)
|
| 81 |
+
prob_cluster (64,) (float64) (Dataset)
|
| 82 |
+
prob_group (64,) (float64) (Dataset)
|
| 83 |
+
prob_supergroup (64,) (float64) (Dataset)
|
| 84 |
+
probs_per_cluster (64, 75) (float64) (Dataset)
|
| 85 |
+
roi_id (64,) (int64) (Dataset)
|
| 86 |
+
roi_table_link (64,) (int64) (Dataset)
|
| 87 |
+
supergroup (64,) (object) (Dataset)
|
| 88 |
+
chirp_60Hz_average/ (Group)
|
| 89 |
+
data (1982, 64) (float64) (Dataset)
|
| 90 |
+
timestamps (1982,) (float64) (Dataset)
|
| 91 |
+
chirp_8Hz_average/ (Group)
|
| 92 |
+
data (259, 64) (float64) (Dataset)
|
| 93 |
+
timestamps (259,) (float64) (Dataset)
|
| 94 |
+
chirp_features/ (Group)
|
| 95 |
+
chirp_on_off_index (64,) (float64) (Dataset)
|
| 96 |
+
chirp_pres_qidx (64,) (float64) (Dataset)
|
| 97 |
+
chirp_qidx (64,) (float64) (Dataset)
|
| 98 |
+
chirp_transience_index (64,) (float64) (Dataset)
|
| 99 |
+
id (64,) (int64) (Dataset)
|
| 100 |
+
roi_id (64,) (int64) (Dataset)
|
| 101 |
+
roi_table_link (64,) (int64) (Dataset)
|
| 102 |
+
chirp_preprocessed_traces/ (Group)
|
| 103 |
+
data (1465, 64) (float32) (Dataset)
|
| 104 |
+
timestamps (1465,) (float64) (Dataset)
|
| 105 |
+
chirp_snippets/ (Group)
|
| 106 |
+
data (259, 64, 5) (float32) (Dataset)
|
| 107 |
+
timestamps (259,) (float64) (Dataset)
|
| 108 |
+
chirp_snippets_t0/ (Group)
|
| 109 |
+
id (1,) (int64) (Dataset)
|
| 110 |
+
snippets_t0_array (1, 5, 64) (float64) (Dataset)
|
| 111 |
+
chirp_triggertimes_snippets/ (Group)
|
| 112 |
+
data (2, 64, 5) (float32) (Dataset)
|
| 113 |
+
starting_time (float64) (Dataset)
|
| 114 |
+
movingbar_features/ (Group)
|
| 115 |
+
bar_ds_index (64,) (float64) (Dataset)
|
| 116 |
+
bar_ds_pvalue (64,) (float64) (Dataset)
|
| 117 |
+
bar_os_index (64,) (float64) (Dataset)
|
| 118 |
+
bar_os_pvalue (64,) (float64) (Dataset)
|
| 119 |
+
bar_pref_dir (64,) (float64) (Dataset)
|
| 120 |
+
bar_pref_or (64,) (float64) (Dataset)
|
| 121 |
+
bar_pres_qidx (64,) (float64) (Dataset)
|
| 122 |
+
bar_qidx (64,) (float64) (Dataset)
|
| 123 |
+
id (64,) (int64) (Dataset)
|
| 124 |
+
roi_id (64,) (int64) (Dataset)
|
| 125 |
+
roi_table_link (64,) (int64) (Dataset)
|
| 126 |
+
movingbar_preprocessed_traces/ (Group)
|
| 127 |
+
data (1108, 64) (float32) (Dataset)
|
| 128 |
+
timestamps (1108,) (float64) (Dataset)
|
| 129 |
+
movingbar_snippets/ (Group)
|
| 130 |
+
data (33, 64, 24) (float32) (Dataset)
|
| 131 |
+
timestamps (33,) (float64) (Dataset)
|
| 132 |
+
movingbar_snippets_t0/ (Group)
|
| 133 |
+
id (1,) (int64) (Dataset)
|
| 134 |
+
snippets_t0_array (1, 24, 64) (float64) (Dataset)
|
| 135 |
+
movingbar_triggertimes_snippets/ (Group)
|
| 136 |
+
data (1, 64, 24) (float32) (Dataset)
|
| 137 |
+
starting_time (float64) (Dataset)
|
| 138 |
+
rois/ (Group)
|
| 139 |
+
ImageSegmentation/ (Group)
|
| 140 |
+
ROI masks/ (Group)
|
| 141 |
+
id (64,) (int64) (Dataset)
|
| 142 |
+
image_mask (64, 64, 64) (bool) (Dataset)
|
| 143 |
+
imaging_plane/ (Group)
|
| 144 |
+
OpticalChannel/ (Group)
|
| 145 |
+
description (object) (Dataset)
|
| 146 |
+
emission_lambda (float64) (Dataset)
|
| 147 |
+
description (object) (Dataset)
|
| 148 |
+
device/ (Group)
|
| 149 |
+
excitation_lambda (float64) (Dataset)
|
| 150 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 151 |
+
imaging_rate (float64) (Dataset)
|
| 152 |
+
indicator (object) (Dataset)
|
| 153 |
+
location (object) (Dataset)
|
| 154 |
+
nxpix (64,) (int64) (Dataset)
|
| 155 |
+
nypix (64,) (int64) (Dataset)
|
| 156 |
+
reference_images/ (Group)
|
| 157 |
+
roi_ids (64,) (int64) (Dataset)
|
| 158 |
+
roi_sizes (64,) (int64) (Dataset)
|
| 159 |
+
roi_sizes_um2 (64,) (float64) (Dataset)
|
| 160 |
+
session_info/ (Group)
|
| 161 |
+
presentation_sequence/ (Group)
|
| 162 |
+
absolute_start_time (2,) (object) (Dataset)
|
| 163 |
+
id (2,) (int64) (Dataset)
|
| 164 |
+
presentation_order (2,) (int64) (Dataset)
|
| 165 |
+
relative_start_time (2,) (float64) (Dataset)
|
| 166 |
+
stimulus_condition (2,) (object) (Dataset)
|
| 167 |
+
spatial/ (Group)
|
| 168 |
+
session_description (object) (Dataset)
|
| 169 |
+
session_start_time (object) (Dataset)
|
| 170 |
+
specifications/ (Group)
|
| 171 |
+
core/ (Group)
|
| 172 |
+
2.8.0/ (Group)
|
| 173 |
+
namespace (object) (Dataset)
|
| 174 |
+
nwb.base (object) (Dataset)
|
| 175 |
+
nwb.behavior (object) (Dataset)
|
| 176 |
+
nwb.device (object) (Dataset)
|
| 177 |
+
nwb.ecephys (object) (Dataset)
|
| 178 |
+
nwb.epoch (object) (Dataset)
|
| 179 |
+
nwb.file (object) (Dataset)
|
| 180 |
+
nwb.icephys (object) (Dataset)
|
| 181 |
+
nwb.image (object) (Dataset)
|
| 182 |
+
nwb.misc (object) (Dataset)
|
| 183 |
+
nwb.ogen (object) (Dataset)
|
| 184 |
+
nwb.ophys (object) (Dataset)
|
| 185 |
+
nwb.retinotopy (object) (Dataset)
|
| 186 |
+
experiment-metadata/ (Group)
|
| 187 |
+
0.1.0/ (Group)
|
| 188 |
+
experiment_metadata.extensions (object) (Dataset)
|
| 189 |
+
namespace (object) (Dataset)
|
| 190 |
+
hdmf-common/ (Group)
|
| 191 |
+
1.8.0/ (Group)
|
| 192 |
+
base (object) (Dataset)
|
| 193 |
+
namespace (object) (Dataset)
|
| 194 |
+
sparse (object) (Dataset)
|
| 195 |
+
table (object) (Dataset)
|
| 196 |
+
hdmf-experimental/ (Group)
|
| 197 |
+
0.5.0/ (Group)
|
| 198 |
+
experimental (object) (Dataset)
|
| 199 |
+
namespace (object) (Dataset)
|
| 200 |
+
resources (object) (Dataset)
|
| 201 |
+
stimulus/ (Group)
|
| 202 |
+
presentation/ (Group)
|
| 203 |
+
templates/ (Group)
|
| 204 |
+
timestamps_reference_time (object) (Dataset)
|
session_Experimenter_2_2022-02-10/experiment_1_RR/field_RGC2_structure.txt
ADDED
|
@@ -0,0 +1,204 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
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|
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|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
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|
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|
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|
|
|
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|
|
|
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|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
NWB File Structure Report
|
| 2 |
+
========================
|
| 3 |
+
File: field_RGC2.nwb
|
| 4 |
+
Size: 26.23 MB
|
| 5 |
+
Generated: 2025-10-31 16:13:45
|
| 6 |
+
|
| 7 |
+
Structure:
|
| 8 |
+
----------
|
| 9 |
+
acquisition/ (Group)
|
| 10 |
+
TwoPhotonSeries_Cond_control_chirp_Pres_1/ (Group)
|
| 11 |
+
data (1869, 64, 64) (uint16) (Dataset)
|
| 12 |
+
imaging_plane/ (Group)
|
| 13 |
+
OpticalChannel/ (Group)
|
| 14 |
+
description (object) (Dataset)
|
| 15 |
+
emission_lambda (float64) (Dataset)
|
| 16 |
+
description (object) (Dataset)
|
| 17 |
+
device/ (Group)
|
| 18 |
+
excitation_lambda (float64) (Dataset)
|
| 19 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 20 |
+
imaging_rate (float64) (Dataset)
|
| 21 |
+
indicator (object) (Dataset)
|
| 22 |
+
location (object) (Dataset)
|
| 23 |
+
timestamps (1869,) (float64) (Dataset)
|
| 24 |
+
TwoPhotonSeries_Cond_control_movingbar_Pres_1/ (Group)
|
| 25 |
+
data (1041, 64, 64) (uint16) (Dataset)
|
| 26 |
+
imaging_plane/ (Group)
|
| 27 |
+
OpticalChannel/ (Group)
|
| 28 |
+
description (object) (Dataset)
|
| 29 |
+
emission_lambda (float64) (Dataset)
|
| 30 |
+
description (object) (Dataset)
|
| 31 |
+
device/ (Group)
|
| 32 |
+
excitation_lambda (float64) (Dataset)
|
| 33 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 34 |
+
imaging_rate (float64) (Dataset)
|
| 35 |
+
indicator (object) (Dataset)
|
| 36 |
+
location (object) (Dataset)
|
| 37 |
+
timestamps (1041,) (float64) (Dataset)
|
| 38 |
+
analysis/ (Group)
|
| 39 |
+
file_create_date (1,) (object) (Dataset)
|
| 40 |
+
general/ (Group)
|
| 41 |
+
devices/ (Group)
|
| 42 |
+
Microscope/ (Group)
|
| 43 |
+
experiment_metadata/ (Group)
|
| 44 |
+
experiment_number (object) (Dataset)
|
| 45 |
+
eye (object) (Dataset)
|
| 46 |
+
preparation_orientation (object) (Dataset)
|
| 47 |
+
setup_id (object) (Dataset)
|
| 48 |
+
experimenter (1,) (object) (Dataset)
|
| 49 |
+
institution (object) (Dataset)
|
| 50 |
+
lab (object) (Dataset)
|
| 51 |
+
optophysiology/ (Group)
|
| 52 |
+
ImagingPlane/ (Group)
|
| 53 |
+
OpticalChannel/ (Group)
|
| 54 |
+
description (object) (Dataset)
|
| 55 |
+
emission_lambda (float64) (Dataset)
|
| 56 |
+
description (object) (Dataset)
|
| 57 |
+
device/ (Group)
|
| 58 |
+
excitation_lambda (float64) (Dataset)
|
| 59 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 60 |
+
imaging_rate (float64) (Dataset)
|
| 61 |
+
indicator (object) (Dataset)
|
| 62 |
+
location (object) (Dataset)
|
| 63 |
+
related_publications (1,) (object) (Dataset)
|
| 64 |
+
subject/ (Group)
|
| 65 |
+
age (object) (Dataset)
|
| 66 |
+
date_of_birth (object) (Dataset)
|
| 67 |
+
genotype (object) (Dataset)
|
| 68 |
+
sex (object) (Dataset)
|
| 69 |
+
species (object) (Dataset)
|
| 70 |
+
identifier (object) (Dataset)
|
| 71 |
+
processing/ (Group)
|
| 72 |
+
Condition_control/ (Group)
|
| 73 |
+
cell_types/ (Group)
|
| 74 |
+
cluster_id (73,) (int64) (Dataset)
|
| 75 |
+
condition (73,) (object) (Dataset)
|
| 76 |
+
group_id (73,) (int64) (Dataset)
|
| 77 |
+
id (73,) (int64) (Dataset)
|
| 78 |
+
preproc_bar (73, 32) (float64) (Dataset)
|
| 79 |
+
preproc_chirp (73, 249) (float64) (Dataset)
|
| 80 |
+
prob_class (73,) (float64) (Dataset)
|
| 81 |
+
prob_cluster (73,) (float64) (Dataset)
|
| 82 |
+
prob_group (73,) (float64) (Dataset)
|
| 83 |
+
prob_supergroup (73,) (float64) (Dataset)
|
| 84 |
+
probs_per_cluster (73, 75) (float64) (Dataset)
|
| 85 |
+
roi_id (73,) (int64) (Dataset)
|
| 86 |
+
roi_table_link (73,) (int64) (Dataset)
|
| 87 |
+
supergroup (73,) (object) (Dataset)
|
| 88 |
+
chirp_60Hz_average/ (Group)
|
| 89 |
+
data (1982, 73) (float64) (Dataset)
|
| 90 |
+
timestamps (1982,) (float64) (Dataset)
|
| 91 |
+
chirp_8Hz_average/ (Group)
|
| 92 |
+
data (259, 73) (float64) (Dataset)
|
| 93 |
+
timestamps (259,) (float64) (Dataset)
|
| 94 |
+
chirp_features/ (Group)
|
| 95 |
+
chirp_on_off_index (73,) (float64) (Dataset)
|
| 96 |
+
chirp_pres_qidx (73,) (float64) (Dataset)
|
| 97 |
+
chirp_qidx (73,) (float64) (Dataset)
|
| 98 |
+
chirp_transience_index (73,) (float64) (Dataset)
|
| 99 |
+
id (73,) (int64) (Dataset)
|
| 100 |
+
roi_id (73,) (int64) (Dataset)
|
| 101 |
+
roi_table_link (73,) (int64) (Dataset)
|
| 102 |
+
chirp_preprocessed_traces/ (Group)
|
| 103 |
+
data (1869, 73) (float32) (Dataset)
|
| 104 |
+
timestamps (1869,) (float64) (Dataset)
|
| 105 |
+
chirp_snippets/ (Group)
|
| 106 |
+
data (259, 73, 5) (float32) (Dataset)
|
| 107 |
+
timestamps (259,) (float64) (Dataset)
|
| 108 |
+
chirp_snippets_t0/ (Group)
|
| 109 |
+
id (1,) (int64) (Dataset)
|
| 110 |
+
snippets_t0_array (1, 5, 73) (float64) (Dataset)
|
| 111 |
+
chirp_triggertimes_snippets/ (Group)
|
| 112 |
+
data (2, 73, 5) (float32) (Dataset)
|
| 113 |
+
starting_time (float64) (Dataset)
|
| 114 |
+
movingbar_features/ (Group)
|
| 115 |
+
bar_ds_index (73,) (float64) (Dataset)
|
| 116 |
+
bar_ds_pvalue (73,) (float64) (Dataset)
|
| 117 |
+
bar_os_index (73,) (float64) (Dataset)
|
| 118 |
+
bar_os_pvalue (73,) (float64) (Dataset)
|
| 119 |
+
bar_pref_dir (73,) (float64) (Dataset)
|
| 120 |
+
bar_pref_or (73,) (float64) (Dataset)
|
| 121 |
+
bar_pres_qidx (73,) (float64) (Dataset)
|
| 122 |
+
bar_qidx (73,) (float64) (Dataset)
|
| 123 |
+
id (73,) (int64) (Dataset)
|
| 124 |
+
roi_id (73,) (int64) (Dataset)
|
| 125 |
+
roi_table_link (73,) (int64) (Dataset)
|
| 126 |
+
movingbar_preprocessed_traces/ (Group)
|
| 127 |
+
data (1041, 73) (float32) (Dataset)
|
| 128 |
+
timestamps (1041,) (float64) (Dataset)
|
| 129 |
+
movingbar_snippets/ (Group)
|
| 130 |
+
data (33, 73, 24) (float32) (Dataset)
|
| 131 |
+
timestamps (33,) (float64) (Dataset)
|
| 132 |
+
movingbar_snippets_t0/ (Group)
|
| 133 |
+
id (1,) (int64) (Dataset)
|
| 134 |
+
snippets_t0_array (1, 24, 73) (float64) (Dataset)
|
| 135 |
+
movingbar_triggertimes_snippets/ (Group)
|
| 136 |
+
data (1, 73, 24) (float32) (Dataset)
|
| 137 |
+
starting_time (float64) (Dataset)
|
| 138 |
+
rois/ (Group)
|
| 139 |
+
ImageSegmentation/ (Group)
|
| 140 |
+
ROI masks/ (Group)
|
| 141 |
+
id (73,) (int64) (Dataset)
|
| 142 |
+
image_mask (73, 64, 64) (bool) (Dataset)
|
| 143 |
+
imaging_plane/ (Group)
|
| 144 |
+
OpticalChannel/ (Group)
|
| 145 |
+
description (object) (Dataset)
|
| 146 |
+
emission_lambda (float64) (Dataset)
|
| 147 |
+
description (object) (Dataset)
|
| 148 |
+
device/ (Group)
|
| 149 |
+
excitation_lambda (float64) (Dataset)
|
| 150 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 151 |
+
imaging_rate (float64) (Dataset)
|
| 152 |
+
indicator (object) (Dataset)
|
| 153 |
+
location (object) (Dataset)
|
| 154 |
+
nxpix (73,) (int64) (Dataset)
|
| 155 |
+
nypix (73,) (int64) (Dataset)
|
| 156 |
+
reference_images/ (Group)
|
| 157 |
+
roi_ids (73,) (int64) (Dataset)
|
| 158 |
+
roi_sizes (73,) (int64) (Dataset)
|
| 159 |
+
roi_sizes_um2 (73,) (float64) (Dataset)
|
| 160 |
+
session_info/ (Group)
|
| 161 |
+
presentation_sequence/ (Group)
|
| 162 |
+
absolute_start_time (2,) (object) (Dataset)
|
| 163 |
+
id (2,) (int64) (Dataset)
|
| 164 |
+
presentation_order (2,) (int64) (Dataset)
|
| 165 |
+
relative_start_time (2,) (float64) (Dataset)
|
| 166 |
+
stimulus_condition (2,) (object) (Dataset)
|
| 167 |
+
spatial/ (Group)
|
| 168 |
+
session_description (object) (Dataset)
|
| 169 |
+
session_start_time (object) (Dataset)
|
| 170 |
+
specifications/ (Group)
|
| 171 |
+
core/ (Group)
|
| 172 |
+
2.8.0/ (Group)
|
| 173 |
+
namespace (object) (Dataset)
|
| 174 |
+
nwb.base (object) (Dataset)
|
| 175 |
+
nwb.behavior (object) (Dataset)
|
| 176 |
+
nwb.device (object) (Dataset)
|
| 177 |
+
nwb.ecephys (object) (Dataset)
|
| 178 |
+
nwb.epoch (object) (Dataset)
|
| 179 |
+
nwb.file (object) (Dataset)
|
| 180 |
+
nwb.icephys (object) (Dataset)
|
| 181 |
+
nwb.image (object) (Dataset)
|
| 182 |
+
nwb.misc (object) (Dataset)
|
| 183 |
+
nwb.ogen (object) (Dataset)
|
| 184 |
+
nwb.ophys (object) (Dataset)
|
| 185 |
+
nwb.retinotopy (object) (Dataset)
|
| 186 |
+
experiment-metadata/ (Group)
|
| 187 |
+
0.1.0/ (Group)
|
| 188 |
+
experiment_metadata.extensions (object) (Dataset)
|
| 189 |
+
namespace (object) (Dataset)
|
| 190 |
+
hdmf-common/ (Group)
|
| 191 |
+
1.8.0/ (Group)
|
| 192 |
+
base (object) (Dataset)
|
| 193 |
+
namespace (object) (Dataset)
|
| 194 |
+
sparse (object) (Dataset)
|
| 195 |
+
table (object) (Dataset)
|
| 196 |
+
hdmf-experimental/ (Group)
|
| 197 |
+
0.5.0/ (Group)
|
| 198 |
+
experimental (object) (Dataset)
|
| 199 |
+
namespace (object) (Dataset)
|
| 200 |
+
resources (object) (Dataset)
|
| 201 |
+
stimulus/ (Group)
|
| 202 |
+
presentation/ (Group)
|
| 203 |
+
templates/ (Group)
|
| 204 |
+
timestamps_reference_time (object) (Dataset)
|
session_Experimenter_2_2022-02-10/experiment_2_LR/field_RGC1_structure.txt
ADDED
|
@@ -0,0 +1,204 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
NWB File Structure Report
|
| 2 |
+
========================
|
| 3 |
+
File: field_RGC1.nwb
|
| 4 |
+
Size: 37.84 MB
|
| 5 |
+
Generated: 2025-10-31 16:13:48
|
| 6 |
+
|
| 7 |
+
Structure:
|
| 8 |
+
----------
|
| 9 |
+
acquisition/ (Group)
|
| 10 |
+
TwoPhotonSeries_Cond_control_chirp_Pres_1/ (Group)
|
| 11 |
+
data (2702, 64, 64) (uint16) (Dataset)
|
| 12 |
+
imaging_plane/ (Group)
|
| 13 |
+
OpticalChannel/ (Group)
|
| 14 |
+
description (object) (Dataset)
|
| 15 |
+
emission_lambda (float64) (Dataset)
|
| 16 |
+
description (object) (Dataset)
|
| 17 |
+
device/ (Group)
|
| 18 |
+
excitation_lambda (float64) (Dataset)
|
| 19 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 20 |
+
imaging_rate (float64) (Dataset)
|
| 21 |
+
indicator (object) (Dataset)
|
| 22 |
+
location (object) (Dataset)
|
| 23 |
+
timestamps (2702,) (float64) (Dataset)
|
| 24 |
+
TwoPhotonSeries_Cond_control_movingbar_Pres_1/ (Group)
|
| 25 |
+
data (1196, 64, 64) (uint16) (Dataset)
|
| 26 |
+
imaging_plane/ (Group)
|
| 27 |
+
OpticalChannel/ (Group)
|
| 28 |
+
description (object) (Dataset)
|
| 29 |
+
emission_lambda (float64) (Dataset)
|
| 30 |
+
description (object) (Dataset)
|
| 31 |
+
device/ (Group)
|
| 32 |
+
excitation_lambda (float64) (Dataset)
|
| 33 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 34 |
+
imaging_rate (float64) (Dataset)
|
| 35 |
+
indicator (object) (Dataset)
|
| 36 |
+
location (object) (Dataset)
|
| 37 |
+
timestamps (1196,) (float64) (Dataset)
|
| 38 |
+
analysis/ (Group)
|
| 39 |
+
file_create_date (1,) (object) (Dataset)
|
| 40 |
+
general/ (Group)
|
| 41 |
+
devices/ (Group)
|
| 42 |
+
Microscope/ (Group)
|
| 43 |
+
experiment_metadata/ (Group)
|
| 44 |
+
experiment_number (object) (Dataset)
|
| 45 |
+
eye (object) (Dataset)
|
| 46 |
+
preparation_orientation (object) (Dataset)
|
| 47 |
+
setup_id (object) (Dataset)
|
| 48 |
+
experimenter (1,) (object) (Dataset)
|
| 49 |
+
institution (object) (Dataset)
|
| 50 |
+
lab (object) (Dataset)
|
| 51 |
+
optophysiology/ (Group)
|
| 52 |
+
ImagingPlane/ (Group)
|
| 53 |
+
OpticalChannel/ (Group)
|
| 54 |
+
description (object) (Dataset)
|
| 55 |
+
emission_lambda (float64) (Dataset)
|
| 56 |
+
description (object) (Dataset)
|
| 57 |
+
device/ (Group)
|
| 58 |
+
excitation_lambda (float64) (Dataset)
|
| 59 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 60 |
+
imaging_rate (float64) (Dataset)
|
| 61 |
+
indicator (object) (Dataset)
|
| 62 |
+
location (object) (Dataset)
|
| 63 |
+
related_publications (1,) (object) (Dataset)
|
| 64 |
+
subject/ (Group)
|
| 65 |
+
age (object) (Dataset)
|
| 66 |
+
date_of_birth (object) (Dataset)
|
| 67 |
+
genotype (object) (Dataset)
|
| 68 |
+
sex (object) (Dataset)
|
| 69 |
+
species (object) (Dataset)
|
| 70 |
+
identifier (object) (Dataset)
|
| 71 |
+
processing/ (Group)
|
| 72 |
+
Condition_control/ (Group)
|
| 73 |
+
cell_types/ (Group)
|
| 74 |
+
cluster_id (105,) (int64) (Dataset)
|
| 75 |
+
condition (105,) (object) (Dataset)
|
| 76 |
+
group_id (105,) (int64) (Dataset)
|
| 77 |
+
id (105,) (int64) (Dataset)
|
| 78 |
+
preproc_bar (105, 32) (float64) (Dataset)
|
| 79 |
+
preproc_chirp (105, 249) (float64) (Dataset)
|
| 80 |
+
prob_class (105,) (float64) (Dataset)
|
| 81 |
+
prob_cluster (105,) (float64) (Dataset)
|
| 82 |
+
prob_group (105,) (float64) (Dataset)
|
| 83 |
+
prob_supergroup (105,) (float64) (Dataset)
|
| 84 |
+
probs_per_cluster (105, 75) (float64) (Dataset)
|
| 85 |
+
roi_id (105,) (int64) (Dataset)
|
| 86 |
+
roi_table_link (105,) (int64) (Dataset)
|
| 87 |
+
supergroup (105,) (object) (Dataset)
|
| 88 |
+
chirp_60Hz_average/ (Group)
|
| 89 |
+
data (1982, 105) (float64) (Dataset)
|
| 90 |
+
timestamps (1982,) (float64) (Dataset)
|
| 91 |
+
chirp_8Hz_average/ (Group)
|
| 92 |
+
data (259, 105) (float64) (Dataset)
|
| 93 |
+
timestamps (259,) (float64) (Dataset)
|
| 94 |
+
chirp_features/ (Group)
|
| 95 |
+
chirp_on_off_index (105,) (float64) (Dataset)
|
| 96 |
+
chirp_pres_qidx (105,) (float64) (Dataset)
|
| 97 |
+
chirp_qidx (105,) (float64) (Dataset)
|
| 98 |
+
chirp_transience_index (105,) (float64) (Dataset)
|
| 99 |
+
id (105,) (int64) (Dataset)
|
| 100 |
+
roi_id (105,) (int64) (Dataset)
|
| 101 |
+
roi_table_link (105,) (int64) (Dataset)
|
| 102 |
+
chirp_preprocessed_traces/ (Group)
|
| 103 |
+
data (2702, 105) (float64) (Dataset)
|
| 104 |
+
timestamps (2702,) (float64) (Dataset)
|
| 105 |
+
chirp_snippets/ (Group)
|
| 106 |
+
data (259, 105, 5) (float64) (Dataset)
|
| 107 |
+
timestamps (259,) (float64) (Dataset)
|
| 108 |
+
chirp_snippets_t0/ (Group)
|
| 109 |
+
id (1,) (int64) (Dataset)
|
| 110 |
+
snippets_t0_array (1, 5, 105) (float64) (Dataset)
|
| 111 |
+
chirp_triggertimes_snippets/ (Group)
|
| 112 |
+
data (2, 105, 5) (float64) (Dataset)
|
| 113 |
+
starting_time (float64) (Dataset)
|
| 114 |
+
movingbar_features/ (Group)
|
| 115 |
+
bar_ds_index (105,) (float64) (Dataset)
|
| 116 |
+
bar_ds_pvalue (105,) (float64) (Dataset)
|
| 117 |
+
bar_os_index (105,) (float64) (Dataset)
|
| 118 |
+
bar_os_pvalue (105,) (float64) (Dataset)
|
| 119 |
+
bar_pref_dir (105,) (float64) (Dataset)
|
| 120 |
+
bar_pref_or (105,) (float64) (Dataset)
|
| 121 |
+
bar_pres_qidx (105,) (float64) (Dataset)
|
| 122 |
+
bar_qidx (105,) (float64) (Dataset)
|
| 123 |
+
id (105,) (int64) (Dataset)
|
| 124 |
+
roi_id (105,) (int64) (Dataset)
|
| 125 |
+
roi_table_link (105,) (int64) (Dataset)
|
| 126 |
+
movingbar_preprocessed_traces/ (Group)
|
| 127 |
+
data (1196, 105) (float64) (Dataset)
|
| 128 |
+
timestamps (1196,) (float64) (Dataset)
|
| 129 |
+
movingbar_snippets/ (Group)
|
| 130 |
+
data (33, 105, 24) (float32) (Dataset)
|
| 131 |
+
timestamps (33,) (float64) (Dataset)
|
| 132 |
+
movingbar_snippets_t0/ (Group)
|
| 133 |
+
id (1,) (int64) (Dataset)
|
| 134 |
+
snippets_t0_array (1, 24, 105) (float64) (Dataset)
|
| 135 |
+
movingbar_triggertimes_snippets/ (Group)
|
| 136 |
+
data (1, 105, 24) (float32) (Dataset)
|
| 137 |
+
starting_time (float64) (Dataset)
|
| 138 |
+
rois/ (Group)
|
| 139 |
+
ImageSegmentation/ (Group)
|
| 140 |
+
ROI masks/ (Group)
|
| 141 |
+
id (105,) (int64) (Dataset)
|
| 142 |
+
image_mask (105, 64, 64) (bool) (Dataset)
|
| 143 |
+
imaging_plane/ (Group)
|
| 144 |
+
OpticalChannel/ (Group)
|
| 145 |
+
description (object) (Dataset)
|
| 146 |
+
emission_lambda (float64) (Dataset)
|
| 147 |
+
description (object) (Dataset)
|
| 148 |
+
device/ (Group)
|
| 149 |
+
excitation_lambda (float64) (Dataset)
|
| 150 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 151 |
+
imaging_rate (float64) (Dataset)
|
| 152 |
+
indicator (object) (Dataset)
|
| 153 |
+
location (object) (Dataset)
|
| 154 |
+
nxpix (105,) (int64) (Dataset)
|
| 155 |
+
nypix (105,) (int64) (Dataset)
|
| 156 |
+
reference_images/ (Group)
|
| 157 |
+
roi_ids (105,) (int64) (Dataset)
|
| 158 |
+
roi_sizes (105,) (int64) (Dataset)
|
| 159 |
+
roi_sizes_um2 (105,) (float64) (Dataset)
|
| 160 |
+
session_info/ (Group)
|
| 161 |
+
presentation_sequence/ (Group)
|
| 162 |
+
absolute_start_time (2,) (object) (Dataset)
|
| 163 |
+
id (2,) (int64) (Dataset)
|
| 164 |
+
presentation_order (2,) (int64) (Dataset)
|
| 165 |
+
relative_start_time (2,) (float64) (Dataset)
|
| 166 |
+
stimulus_condition (2,) (object) (Dataset)
|
| 167 |
+
spatial/ (Group)
|
| 168 |
+
session_description (object) (Dataset)
|
| 169 |
+
session_start_time (object) (Dataset)
|
| 170 |
+
specifications/ (Group)
|
| 171 |
+
core/ (Group)
|
| 172 |
+
2.8.0/ (Group)
|
| 173 |
+
namespace (object) (Dataset)
|
| 174 |
+
nwb.base (object) (Dataset)
|
| 175 |
+
nwb.behavior (object) (Dataset)
|
| 176 |
+
nwb.device (object) (Dataset)
|
| 177 |
+
nwb.ecephys (object) (Dataset)
|
| 178 |
+
nwb.epoch (object) (Dataset)
|
| 179 |
+
nwb.file (object) (Dataset)
|
| 180 |
+
nwb.icephys (object) (Dataset)
|
| 181 |
+
nwb.image (object) (Dataset)
|
| 182 |
+
nwb.misc (object) (Dataset)
|
| 183 |
+
nwb.ogen (object) (Dataset)
|
| 184 |
+
nwb.ophys (object) (Dataset)
|
| 185 |
+
nwb.retinotopy (object) (Dataset)
|
| 186 |
+
experiment-metadata/ (Group)
|
| 187 |
+
0.1.0/ (Group)
|
| 188 |
+
experiment_metadata.extensions (object) (Dataset)
|
| 189 |
+
namespace (object) (Dataset)
|
| 190 |
+
hdmf-common/ (Group)
|
| 191 |
+
1.8.0/ (Group)
|
| 192 |
+
base (object) (Dataset)
|
| 193 |
+
namespace (object) (Dataset)
|
| 194 |
+
sparse (object) (Dataset)
|
| 195 |
+
table (object) (Dataset)
|
| 196 |
+
hdmf-experimental/ (Group)
|
| 197 |
+
0.5.0/ (Group)
|
| 198 |
+
experimental (object) (Dataset)
|
| 199 |
+
namespace (object) (Dataset)
|
| 200 |
+
resources (object) (Dataset)
|
| 201 |
+
stimulus/ (Group)
|
| 202 |
+
presentation/ (Group)
|
| 203 |
+
templates/ (Group)
|
| 204 |
+
timestamps_reference_time (object) (Dataset)
|
session_Experimenter_2_2022-02-10/experiment_2_LR/field_RGC2_structure.txt
ADDED
|
@@ -0,0 +1,204 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
NWB File Structure Report
|
| 2 |
+
========================
|
| 3 |
+
File: field_RGC2.nwb
|
| 4 |
+
Size: 41.18 MB
|
| 5 |
+
Generated: 2025-10-31 16:13:50
|
| 6 |
+
|
| 7 |
+
Structure:
|
| 8 |
+
----------
|
| 9 |
+
acquisition/ (Group)
|
| 10 |
+
TwoPhotonSeries_Cond_control_chirp_Pres_1/ (Group)
|
| 11 |
+
data (1503, 64, 64) (uint16) (Dataset)
|
| 12 |
+
imaging_plane/ (Group)
|
| 13 |
+
OpticalChannel/ (Group)
|
| 14 |
+
description (object) (Dataset)
|
| 15 |
+
emission_lambda (float64) (Dataset)
|
| 16 |
+
description (object) (Dataset)
|
| 17 |
+
device/ (Group)
|
| 18 |
+
excitation_lambda (float64) (Dataset)
|
| 19 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 20 |
+
imaging_rate (float64) (Dataset)
|
| 21 |
+
indicator (object) (Dataset)
|
| 22 |
+
location (object) (Dataset)
|
| 23 |
+
timestamps (1503,) (float64) (Dataset)
|
| 24 |
+
TwoPhotonSeries_Cond_control_movingbar_Pres_1/ (Group)
|
| 25 |
+
data (3000, 64, 64) (uint16) (Dataset)
|
| 26 |
+
imaging_plane/ (Group)
|
| 27 |
+
OpticalChannel/ (Group)
|
| 28 |
+
description (object) (Dataset)
|
| 29 |
+
emission_lambda (float64) (Dataset)
|
| 30 |
+
description (object) (Dataset)
|
| 31 |
+
device/ (Group)
|
| 32 |
+
excitation_lambda (float64) (Dataset)
|
| 33 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 34 |
+
imaging_rate (float64) (Dataset)
|
| 35 |
+
indicator (object) (Dataset)
|
| 36 |
+
location (object) (Dataset)
|
| 37 |
+
timestamps (3000,) (float64) (Dataset)
|
| 38 |
+
analysis/ (Group)
|
| 39 |
+
file_create_date (1,) (object) (Dataset)
|
| 40 |
+
general/ (Group)
|
| 41 |
+
devices/ (Group)
|
| 42 |
+
Microscope/ (Group)
|
| 43 |
+
experiment_metadata/ (Group)
|
| 44 |
+
experiment_number (object) (Dataset)
|
| 45 |
+
eye (object) (Dataset)
|
| 46 |
+
preparation_orientation (object) (Dataset)
|
| 47 |
+
setup_id (object) (Dataset)
|
| 48 |
+
experimenter (1,) (object) (Dataset)
|
| 49 |
+
institution (object) (Dataset)
|
| 50 |
+
lab (object) (Dataset)
|
| 51 |
+
optophysiology/ (Group)
|
| 52 |
+
ImagingPlane/ (Group)
|
| 53 |
+
OpticalChannel/ (Group)
|
| 54 |
+
description (object) (Dataset)
|
| 55 |
+
emission_lambda (float64) (Dataset)
|
| 56 |
+
description (object) (Dataset)
|
| 57 |
+
device/ (Group)
|
| 58 |
+
excitation_lambda (float64) (Dataset)
|
| 59 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 60 |
+
imaging_rate (float64) (Dataset)
|
| 61 |
+
indicator (object) (Dataset)
|
| 62 |
+
location (object) (Dataset)
|
| 63 |
+
related_publications (1,) (object) (Dataset)
|
| 64 |
+
subject/ (Group)
|
| 65 |
+
age (object) (Dataset)
|
| 66 |
+
date_of_birth (object) (Dataset)
|
| 67 |
+
genotype (object) (Dataset)
|
| 68 |
+
sex (object) (Dataset)
|
| 69 |
+
species (object) (Dataset)
|
| 70 |
+
identifier (object) (Dataset)
|
| 71 |
+
processing/ (Group)
|
| 72 |
+
Condition_control/ (Group)
|
| 73 |
+
cell_types/ (Group)
|
| 74 |
+
cluster_id (114,) (int64) (Dataset)
|
| 75 |
+
condition (114,) (object) (Dataset)
|
| 76 |
+
group_id (114,) (int64) (Dataset)
|
| 77 |
+
id (114,) (int64) (Dataset)
|
| 78 |
+
preproc_bar (114, 32) (float64) (Dataset)
|
| 79 |
+
preproc_chirp (114, 249) (float64) (Dataset)
|
| 80 |
+
prob_class (114,) (float64) (Dataset)
|
| 81 |
+
prob_cluster (114,) (float64) (Dataset)
|
| 82 |
+
prob_group (114,) (float64) (Dataset)
|
| 83 |
+
prob_supergroup (114,) (float64) (Dataset)
|
| 84 |
+
probs_per_cluster (114, 75) (float64) (Dataset)
|
| 85 |
+
roi_id (114,) (int64) (Dataset)
|
| 86 |
+
roi_table_link (114,) (int64) (Dataset)
|
| 87 |
+
supergroup (114,) (object) (Dataset)
|
| 88 |
+
chirp_60Hz_average/ (Group)
|
| 89 |
+
data (1982, 114) (float64) (Dataset)
|
| 90 |
+
timestamps (1982,) (float64) (Dataset)
|
| 91 |
+
chirp_8Hz_average/ (Group)
|
| 92 |
+
data (259, 114) (float64) (Dataset)
|
| 93 |
+
timestamps (259,) (float64) (Dataset)
|
| 94 |
+
chirp_features/ (Group)
|
| 95 |
+
chirp_on_off_index (114,) (float64) (Dataset)
|
| 96 |
+
chirp_pres_qidx (114,) (float64) (Dataset)
|
| 97 |
+
chirp_qidx (114,) (float64) (Dataset)
|
| 98 |
+
chirp_transience_index (114,) (float64) (Dataset)
|
| 99 |
+
id (114,) (int64) (Dataset)
|
| 100 |
+
roi_id (114,) (int64) (Dataset)
|
| 101 |
+
roi_table_link (114,) (int64) (Dataset)
|
| 102 |
+
chirp_preprocessed_traces/ (Group)
|
| 103 |
+
data (1503, 114) (float32) (Dataset)
|
| 104 |
+
timestamps (1503,) (float64) (Dataset)
|
| 105 |
+
chirp_snippets/ (Group)
|
| 106 |
+
data (259, 114, 5) (float32) (Dataset)
|
| 107 |
+
timestamps (259,) (float64) (Dataset)
|
| 108 |
+
chirp_snippets_t0/ (Group)
|
| 109 |
+
id (1,) (int64) (Dataset)
|
| 110 |
+
snippets_t0_array (1, 5, 114) (float64) (Dataset)
|
| 111 |
+
chirp_triggertimes_snippets/ (Group)
|
| 112 |
+
data (2, 114, 5) (float32) (Dataset)
|
| 113 |
+
starting_time (float64) (Dataset)
|
| 114 |
+
movingbar_features/ (Group)
|
| 115 |
+
bar_ds_index (114,) (float64) (Dataset)
|
| 116 |
+
bar_ds_pvalue (114,) (float64) (Dataset)
|
| 117 |
+
bar_os_index (114,) (float64) (Dataset)
|
| 118 |
+
bar_os_pvalue (114,) (float64) (Dataset)
|
| 119 |
+
bar_pref_dir (114,) (float64) (Dataset)
|
| 120 |
+
bar_pref_or (114,) (float64) (Dataset)
|
| 121 |
+
bar_pres_qidx (114,) (float64) (Dataset)
|
| 122 |
+
bar_qidx (114,) (float64) (Dataset)
|
| 123 |
+
id (114,) (int64) (Dataset)
|
| 124 |
+
roi_id (114,) (int64) (Dataset)
|
| 125 |
+
roi_table_link (114,) (int64) (Dataset)
|
| 126 |
+
movingbar_preprocessed_traces/ (Group)
|
| 127 |
+
data (3000, 114) (float32) (Dataset)
|
| 128 |
+
timestamps (3000,) (float64) (Dataset)
|
| 129 |
+
movingbar_snippets/ (Group)
|
| 130 |
+
data (33, 114, 24) (float32) (Dataset)
|
| 131 |
+
timestamps (33,) (float64) (Dataset)
|
| 132 |
+
movingbar_snippets_t0/ (Group)
|
| 133 |
+
id (1,) (int64) (Dataset)
|
| 134 |
+
snippets_t0_array (1, 24, 114) (float64) (Dataset)
|
| 135 |
+
movingbar_triggertimes_snippets/ (Group)
|
| 136 |
+
data (1, 114, 24) (float32) (Dataset)
|
| 137 |
+
starting_time (float64) (Dataset)
|
| 138 |
+
rois/ (Group)
|
| 139 |
+
ImageSegmentation/ (Group)
|
| 140 |
+
ROI masks/ (Group)
|
| 141 |
+
id (114,) (int64) (Dataset)
|
| 142 |
+
image_mask (114, 64, 64) (bool) (Dataset)
|
| 143 |
+
imaging_plane/ (Group)
|
| 144 |
+
OpticalChannel/ (Group)
|
| 145 |
+
description (object) (Dataset)
|
| 146 |
+
emission_lambda (float64) (Dataset)
|
| 147 |
+
description (object) (Dataset)
|
| 148 |
+
device/ (Group)
|
| 149 |
+
excitation_lambda (float64) (Dataset)
|
| 150 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 151 |
+
imaging_rate (float64) (Dataset)
|
| 152 |
+
indicator (object) (Dataset)
|
| 153 |
+
location (object) (Dataset)
|
| 154 |
+
nxpix (114,) (int64) (Dataset)
|
| 155 |
+
nypix (114,) (int64) (Dataset)
|
| 156 |
+
reference_images/ (Group)
|
| 157 |
+
roi_ids (114,) (int64) (Dataset)
|
| 158 |
+
roi_sizes (114,) (int64) (Dataset)
|
| 159 |
+
roi_sizes_um2 (114,) (float64) (Dataset)
|
| 160 |
+
session_info/ (Group)
|
| 161 |
+
presentation_sequence/ (Group)
|
| 162 |
+
absolute_start_time (2,) (object) (Dataset)
|
| 163 |
+
id (2,) (int64) (Dataset)
|
| 164 |
+
presentation_order (2,) (int64) (Dataset)
|
| 165 |
+
relative_start_time (2,) (float64) (Dataset)
|
| 166 |
+
stimulus_condition (2,) (object) (Dataset)
|
| 167 |
+
spatial/ (Group)
|
| 168 |
+
session_description (object) (Dataset)
|
| 169 |
+
session_start_time (object) (Dataset)
|
| 170 |
+
specifications/ (Group)
|
| 171 |
+
core/ (Group)
|
| 172 |
+
2.8.0/ (Group)
|
| 173 |
+
namespace (object) (Dataset)
|
| 174 |
+
nwb.base (object) (Dataset)
|
| 175 |
+
nwb.behavior (object) (Dataset)
|
| 176 |
+
nwb.device (object) (Dataset)
|
| 177 |
+
nwb.ecephys (object) (Dataset)
|
| 178 |
+
nwb.epoch (object) (Dataset)
|
| 179 |
+
nwb.file (object) (Dataset)
|
| 180 |
+
nwb.icephys (object) (Dataset)
|
| 181 |
+
nwb.image (object) (Dataset)
|
| 182 |
+
nwb.misc (object) (Dataset)
|
| 183 |
+
nwb.ogen (object) (Dataset)
|
| 184 |
+
nwb.ophys (object) (Dataset)
|
| 185 |
+
nwb.retinotopy (object) (Dataset)
|
| 186 |
+
experiment-metadata/ (Group)
|
| 187 |
+
0.1.0/ (Group)
|
| 188 |
+
experiment_metadata.extensions (object) (Dataset)
|
| 189 |
+
namespace (object) (Dataset)
|
| 190 |
+
hdmf-common/ (Group)
|
| 191 |
+
1.8.0/ (Group)
|
| 192 |
+
base (object) (Dataset)
|
| 193 |
+
namespace (object) (Dataset)
|
| 194 |
+
sparse (object) (Dataset)
|
| 195 |
+
table (object) (Dataset)
|
| 196 |
+
hdmf-experimental/ (Group)
|
| 197 |
+
0.5.0/ (Group)
|
| 198 |
+
experimental (object) (Dataset)
|
| 199 |
+
namespace (object) (Dataset)
|
| 200 |
+
resources (object) (Dataset)
|
| 201 |
+
stimulus/ (Group)
|
| 202 |
+
presentation/ (Group)
|
| 203 |
+
templates/ (Group)
|
| 204 |
+
timestamps_reference_time (object) (Dataset)
|
session_Experimenter_2_2022-02-10/experiment_2_LR/field_RGC3_structure.txt
ADDED
|
@@ -0,0 +1,204 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
NWB File Structure Report
|
| 2 |
+
========================
|
| 3 |
+
File: field_RGC3.nwb
|
| 4 |
+
Size: 33.59 MB
|
| 5 |
+
Generated: 2025-10-31 16:13:52
|
| 6 |
+
|
| 7 |
+
Structure:
|
| 8 |
+
----------
|
| 9 |
+
acquisition/ (Group)
|
| 10 |
+
TwoPhotonSeries_Cond_control_chirp_Pres_1/ (Group)
|
| 11 |
+
data (1532, 64, 64) (uint16) (Dataset)
|
| 12 |
+
imaging_plane/ (Group)
|
| 13 |
+
OpticalChannel/ (Group)
|
| 14 |
+
description (object) (Dataset)
|
| 15 |
+
emission_lambda (float64) (Dataset)
|
| 16 |
+
description (object) (Dataset)
|
| 17 |
+
device/ (Group)
|
| 18 |
+
excitation_lambda (float64) (Dataset)
|
| 19 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 20 |
+
imaging_rate (float64) (Dataset)
|
| 21 |
+
indicator (object) (Dataset)
|
| 22 |
+
location (object) (Dataset)
|
| 23 |
+
timestamps (1532,) (float64) (Dataset)
|
| 24 |
+
TwoPhotonSeries_Cond_control_movingbar_Pres_1/ (Group)
|
| 25 |
+
data (1815, 64, 64) (uint16) (Dataset)
|
| 26 |
+
imaging_plane/ (Group)
|
| 27 |
+
OpticalChannel/ (Group)
|
| 28 |
+
description (object) (Dataset)
|
| 29 |
+
emission_lambda (float64) (Dataset)
|
| 30 |
+
description (object) (Dataset)
|
| 31 |
+
device/ (Group)
|
| 32 |
+
excitation_lambda (float64) (Dataset)
|
| 33 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 34 |
+
imaging_rate (float64) (Dataset)
|
| 35 |
+
indicator (object) (Dataset)
|
| 36 |
+
location (object) (Dataset)
|
| 37 |
+
timestamps (1815,) (float64) (Dataset)
|
| 38 |
+
analysis/ (Group)
|
| 39 |
+
file_create_date (1,) (object) (Dataset)
|
| 40 |
+
general/ (Group)
|
| 41 |
+
devices/ (Group)
|
| 42 |
+
Microscope/ (Group)
|
| 43 |
+
experiment_metadata/ (Group)
|
| 44 |
+
experiment_number (object) (Dataset)
|
| 45 |
+
eye (object) (Dataset)
|
| 46 |
+
preparation_orientation (object) (Dataset)
|
| 47 |
+
setup_id (object) (Dataset)
|
| 48 |
+
experimenter (1,) (object) (Dataset)
|
| 49 |
+
institution (object) (Dataset)
|
| 50 |
+
lab (object) (Dataset)
|
| 51 |
+
optophysiology/ (Group)
|
| 52 |
+
ImagingPlane/ (Group)
|
| 53 |
+
OpticalChannel/ (Group)
|
| 54 |
+
description (object) (Dataset)
|
| 55 |
+
emission_lambda (float64) (Dataset)
|
| 56 |
+
description (object) (Dataset)
|
| 57 |
+
device/ (Group)
|
| 58 |
+
excitation_lambda (float64) (Dataset)
|
| 59 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 60 |
+
imaging_rate (float64) (Dataset)
|
| 61 |
+
indicator (object) (Dataset)
|
| 62 |
+
location (object) (Dataset)
|
| 63 |
+
related_publications (1,) (object) (Dataset)
|
| 64 |
+
subject/ (Group)
|
| 65 |
+
age (object) (Dataset)
|
| 66 |
+
date_of_birth (object) (Dataset)
|
| 67 |
+
genotype (object) (Dataset)
|
| 68 |
+
sex (object) (Dataset)
|
| 69 |
+
species (object) (Dataset)
|
| 70 |
+
identifier (object) (Dataset)
|
| 71 |
+
processing/ (Group)
|
| 72 |
+
Condition_control/ (Group)
|
| 73 |
+
cell_types/ (Group)
|
| 74 |
+
cluster_id (113,) (int64) (Dataset)
|
| 75 |
+
condition (113,) (object) (Dataset)
|
| 76 |
+
group_id (113,) (int64) (Dataset)
|
| 77 |
+
id (113,) (int64) (Dataset)
|
| 78 |
+
preproc_bar (113, 32) (float64) (Dataset)
|
| 79 |
+
preproc_chirp (113, 249) (float64) (Dataset)
|
| 80 |
+
prob_class (113,) (float64) (Dataset)
|
| 81 |
+
prob_cluster (113,) (float64) (Dataset)
|
| 82 |
+
prob_group (113,) (float64) (Dataset)
|
| 83 |
+
prob_supergroup (113,) (float64) (Dataset)
|
| 84 |
+
probs_per_cluster (113, 75) (float64) (Dataset)
|
| 85 |
+
roi_id (113,) (int64) (Dataset)
|
| 86 |
+
roi_table_link (113,) (int64) (Dataset)
|
| 87 |
+
supergroup (113,) (object) (Dataset)
|
| 88 |
+
chirp_60Hz_average/ (Group)
|
| 89 |
+
data (1982, 113) (float64) (Dataset)
|
| 90 |
+
timestamps (1982,) (float64) (Dataset)
|
| 91 |
+
chirp_8Hz_average/ (Group)
|
| 92 |
+
data (259, 113) (float64) (Dataset)
|
| 93 |
+
timestamps (259,) (float64) (Dataset)
|
| 94 |
+
chirp_features/ (Group)
|
| 95 |
+
chirp_on_off_index (113,) (float64) (Dataset)
|
| 96 |
+
chirp_pres_qidx (113,) (float64) (Dataset)
|
| 97 |
+
chirp_qidx (113,) (float64) (Dataset)
|
| 98 |
+
chirp_transience_index (113,) (float64) (Dataset)
|
| 99 |
+
id (113,) (int64) (Dataset)
|
| 100 |
+
roi_id (113,) (int64) (Dataset)
|
| 101 |
+
roi_table_link (113,) (int64) (Dataset)
|
| 102 |
+
chirp_preprocessed_traces/ (Group)
|
| 103 |
+
data (1532, 113) (float64) (Dataset)
|
| 104 |
+
timestamps (1532,) (float64) (Dataset)
|
| 105 |
+
chirp_snippets/ (Group)
|
| 106 |
+
data (259, 113, 5) (float64) (Dataset)
|
| 107 |
+
timestamps (259,) (float64) (Dataset)
|
| 108 |
+
chirp_snippets_t0/ (Group)
|
| 109 |
+
id (1,) (int64) (Dataset)
|
| 110 |
+
snippets_t0_array (1, 5, 113) (float64) (Dataset)
|
| 111 |
+
chirp_triggertimes_snippets/ (Group)
|
| 112 |
+
data (2, 113, 5) (float64) (Dataset)
|
| 113 |
+
starting_time (float64) (Dataset)
|
| 114 |
+
movingbar_features/ (Group)
|
| 115 |
+
bar_ds_index (113,) (float64) (Dataset)
|
| 116 |
+
bar_ds_pvalue (113,) (float64) (Dataset)
|
| 117 |
+
bar_os_index (113,) (float64) (Dataset)
|
| 118 |
+
bar_os_pvalue (113,) (float64) (Dataset)
|
| 119 |
+
bar_pref_dir (113,) (float64) (Dataset)
|
| 120 |
+
bar_pref_or (113,) (float64) (Dataset)
|
| 121 |
+
bar_pres_qidx (113,) (float64) (Dataset)
|
| 122 |
+
bar_qidx (113,) (float64) (Dataset)
|
| 123 |
+
id (113,) (int64) (Dataset)
|
| 124 |
+
roi_id (113,) (int64) (Dataset)
|
| 125 |
+
roi_table_link (113,) (int64) (Dataset)
|
| 126 |
+
movingbar_preprocessed_traces/ (Group)
|
| 127 |
+
data (1815, 113) (float64) (Dataset)
|
| 128 |
+
timestamps (1815,) (float64) (Dataset)
|
| 129 |
+
movingbar_snippets/ (Group)
|
| 130 |
+
data (33, 113, 24) (float32) (Dataset)
|
| 131 |
+
timestamps (33,) (float64) (Dataset)
|
| 132 |
+
movingbar_snippets_t0/ (Group)
|
| 133 |
+
id (1,) (int64) (Dataset)
|
| 134 |
+
snippets_t0_array (1, 24, 113) (float64) (Dataset)
|
| 135 |
+
movingbar_triggertimes_snippets/ (Group)
|
| 136 |
+
data (1, 113, 24) (float32) (Dataset)
|
| 137 |
+
starting_time (float64) (Dataset)
|
| 138 |
+
rois/ (Group)
|
| 139 |
+
ImageSegmentation/ (Group)
|
| 140 |
+
ROI masks/ (Group)
|
| 141 |
+
id (113,) (int64) (Dataset)
|
| 142 |
+
image_mask (113, 64, 64) (bool) (Dataset)
|
| 143 |
+
imaging_plane/ (Group)
|
| 144 |
+
OpticalChannel/ (Group)
|
| 145 |
+
description (object) (Dataset)
|
| 146 |
+
emission_lambda (float64) (Dataset)
|
| 147 |
+
description (object) (Dataset)
|
| 148 |
+
device/ (Group)
|
| 149 |
+
excitation_lambda (float64) (Dataset)
|
| 150 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 151 |
+
imaging_rate (float64) (Dataset)
|
| 152 |
+
indicator (object) (Dataset)
|
| 153 |
+
location (object) (Dataset)
|
| 154 |
+
nxpix (113,) (int64) (Dataset)
|
| 155 |
+
nypix (113,) (int64) (Dataset)
|
| 156 |
+
reference_images/ (Group)
|
| 157 |
+
roi_ids (113,) (int64) (Dataset)
|
| 158 |
+
roi_sizes (113,) (int64) (Dataset)
|
| 159 |
+
roi_sizes_um2 (113,) (float64) (Dataset)
|
| 160 |
+
session_info/ (Group)
|
| 161 |
+
presentation_sequence/ (Group)
|
| 162 |
+
absolute_start_time (2,) (object) (Dataset)
|
| 163 |
+
id (2,) (int64) (Dataset)
|
| 164 |
+
presentation_order (2,) (int64) (Dataset)
|
| 165 |
+
relative_start_time (2,) (float64) (Dataset)
|
| 166 |
+
stimulus_condition (2,) (object) (Dataset)
|
| 167 |
+
spatial/ (Group)
|
| 168 |
+
session_description (object) (Dataset)
|
| 169 |
+
session_start_time (object) (Dataset)
|
| 170 |
+
specifications/ (Group)
|
| 171 |
+
core/ (Group)
|
| 172 |
+
2.8.0/ (Group)
|
| 173 |
+
namespace (object) (Dataset)
|
| 174 |
+
nwb.base (object) (Dataset)
|
| 175 |
+
nwb.behavior (object) (Dataset)
|
| 176 |
+
nwb.device (object) (Dataset)
|
| 177 |
+
nwb.ecephys (object) (Dataset)
|
| 178 |
+
nwb.epoch (object) (Dataset)
|
| 179 |
+
nwb.file (object) (Dataset)
|
| 180 |
+
nwb.icephys (object) (Dataset)
|
| 181 |
+
nwb.image (object) (Dataset)
|
| 182 |
+
nwb.misc (object) (Dataset)
|
| 183 |
+
nwb.ogen (object) (Dataset)
|
| 184 |
+
nwb.ophys (object) (Dataset)
|
| 185 |
+
nwb.retinotopy (object) (Dataset)
|
| 186 |
+
experiment-metadata/ (Group)
|
| 187 |
+
0.1.0/ (Group)
|
| 188 |
+
experiment_metadata.extensions (object) (Dataset)
|
| 189 |
+
namespace (object) (Dataset)
|
| 190 |
+
hdmf-common/ (Group)
|
| 191 |
+
1.8.0/ (Group)
|
| 192 |
+
base (object) (Dataset)
|
| 193 |
+
namespace (object) (Dataset)
|
| 194 |
+
sparse (object) (Dataset)
|
| 195 |
+
table (object) (Dataset)
|
| 196 |
+
hdmf-experimental/ (Group)
|
| 197 |
+
0.5.0/ (Group)
|
| 198 |
+
experimental (object) (Dataset)
|
| 199 |
+
namespace (object) (Dataset)
|
| 200 |
+
resources (object) (Dataset)
|
| 201 |
+
stimulus/ (Group)
|
| 202 |
+
presentation/ (Group)
|
| 203 |
+
templates/ (Group)
|
| 204 |
+
timestamps_reference_time (object) (Dataset)
|
session_Experimenter_2_2022-07-05/experiment_1_LR/field_RGC0_structure.txt
ADDED
|
@@ -0,0 +1,224 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
NWB File Structure Report
|
| 2 |
+
========================
|
| 3 |
+
File: field_RGC0.nwb
|
| 4 |
+
Size: 23.24 MB
|
| 5 |
+
Generated: 2025-10-31 16:14:15
|
| 6 |
+
|
| 7 |
+
Structure:
|
| 8 |
+
----------
|
| 9 |
+
acquisition/ (Group)
|
| 10 |
+
TwoPhotonSeries_Cond_control_chirp_Pres_1/ (Group)
|
| 11 |
+
data (1442, 64, 64) (uint16) (Dataset)
|
| 12 |
+
imaging_plane/ (Group)
|
| 13 |
+
OpticalChannel/ (Group)
|
| 14 |
+
description (object) (Dataset)
|
| 15 |
+
emission_lambda (float64) (Dataset)
|
| 16 |
+
description (object) (Dataset)
|
| 17 |
+
device/ (Group)
|
| 18 |
+
excitation_lambda (float64) (Dataset)
|
| 19 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 20 |
+
imaging_rate (float64) (Dataset)
|
| 21 |
+
indicator (object) (Dataset)
|
| 22 |
+
location (object) (Dataset)
|
| 23 |
+
timestamps (1442,) (float64) (Dataset)
|
| 24 |
+
TwoPhotonSeries_Cond_control_movingbar_Pres_1/ (Group)
|
| 25 |
+
data (998, 64, 64) (uint16) (Dataset)
|
| 26 |
+
imaging_plane/ (Group)
|
| 27 |
+
OpticalChannel/ (Group)
|
| 28 |
+
description (object) (Dataset)
|
| 29 |
+
emission_lambda (float64) (Dataset)
|
| 30 |
+
description (object) (Dataset)
|
| 31 |
+
device/ (Group)
|
| 32 |
+
excitation_lambda (float64) (Dataset)
|
| 33 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 34 |
+
imaging_rate (float64) (Dataset)
|
| 35 |
+
indicator (object) (Dataset)
|
| 36 |
+
location (object) (Dataset)
|
| 37 |
+
timestamps (998,) (float64) (Dataset)
|
| 38 |
+
analysis/ (Group)
|
| 39 |
+
file_create_date (1,) (object) (Dataset)
|
| 40 |
+
general/ (Group)
|
| 41 |
+
devices/ (Group)
|
| 42 |
+
Microscope/ (Group)
|
| 43 |
+
experiment_metadata/ (Group)
|
| 44 |
+
experiment_number (object) (Dataset)
|
| 45 |
+
eye (object) (Dataset)
|
| 46 |
+
preparation_orientation (object) (Dataset)
|
| 47 |
+
setup_id (object) (Dataset)
|
| 48 |
+
experimenter (1,) (object) (Dataset)
|
| 49 |
+
institution (object) (Dataset)
|
| 50 |
+
lab (object) (Dataset)
|
| 51 |
+
optophysiology/ (Group)
|
| 52 |
+
ImagingPlane/ (Group)
|
| 53 |
+
OpticalChannel/ (Group)
|
| 54 |
+
description (object) (Dataset)
|
| 55 |
+
emission_lambda (float64) (Dataset)
|
| 56 |
+
description (object) (Dataset)
|
| 57 |
+
device/ (Group)
|
| 58 |
+
excitation_lambda (float64) (Dataset)
|
| 59 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 60 |
+
imaging_rate (float64) (Dataset)
|
| 61 |
+
indicator (object) (Dataset)
|
| 62 |
+
location (object) (Dataset)
|
| 63 |
+
related_publications (1,) (object) (Dataset)
|
| 64 |
+
subject/ (Group)
|
| 65 |
+
age (object) (Dataset)
|
| 66 |
+
date_of_birth (object) (Dataset)
|
| 67 |
+
genotype (object) (Dataset)
|
| 68 |
+
sex (object) (Dataset)
|
| 69 |
+
species (object) (Dataset)
|
| 70 |
+
identifier (object) (Dataset)
|
| 71 |
+
processing/ (Group)
|
| 72 |
+
Condition_control/ (Group)
|
| 73 |
+
cell_types/ (Group)
|
| 74 |
+
cluster_id (92,) (int64) (Dataset)
|
| 75 |
+
condition (92,) (object) (Dataset)
|
| 76 |
+
group_id (92,) (int64) (Dataset)
|
| 77 |
+
id (92,) (int64) (Dataset)
|
| 78 |
+
preproc_bar (92, 32) (float64) (Dataset)
|
| 79 |
+
preproc_chirp (92, 249) (float64) (Dataset)
|
| 80 |
+
prob_class (92,) (float64) (Dataset)
|
| 81 |
+
prob_cluster (92,) (float64) (Dataset)
|
| 82 |
+
prob_group (92,) (float64) (Dataset)
|
| 83 |
+
prob_supergroup (92,) (float64) (Dataset)
|
| 84 |
+
probs_per_cluster (92, 75) (float64) (Dataset)
|
| 85 |
+
roi_id (92,) (int64) (Dataset)
|
| 86 |
+
roi_table_link (92,) (int64) (Dataset)
|
| 87 |
+
supergroup (92,) (object) (Dataset)
|
| 88 |
+
chirp_60Hz_average/ (Group)
|
| 89 |
+
data (1982, 92) (float64) (Dataset)
|
| 90 |
+
timestamps (1982,) (float64) (Dataset)
|
| 91 |
+
chirp_8Hz_average/ (Group)
|
| 92 |
+
data (259, 92) (float64) (Dataset)
|
| 93 |
+
timestamps (259,) (float64) (Dataset)
|
| 94 |
+
chirp_features/ (Group)
|
| 95 |
+
chirp_on_off_index (92,) (float64) (Dataset)
|
| 96 |
+
chirp_pres_qidx (92,) (float64) (Dataset)
|
| 97 |
+
chirp_qidx (92,) (float64) (Dataset)
|
| 98 |
+
chirp_transience_index (92,) (float64) (Dataset)
|
| 99 |
+
id (92,) (int64) (Dataset)
|
| 100 |
+
roi_id (92,) (int64) (Dataset)
|
| 101 |
+
roi_table_link (92,) (int64) (Dataset)
|
| 102 |
+
chirp_preprocessed_traces/ (Group)
|
| 103 |
+
data (1442, 92) (float32) (Dataset)
|
| 104 |
+
timestamps (1442,) (float64) (Dataset)
|
| 105 |
+
chirp_snippets/ (Group)
|
| 106 |
+
data (259, 92, 5) (float32) (Dataset)
|
| 107 |
+
timestamps (259,) (float64) (Dataset)
|
| 108 |
+
chirp_snippets_t0/ (Group)
|
| 109 |
+
id (1,) (int64) (Dataset)
|
| 110 |
+
snippets_t0_array (1, 5, 92) (float64) (Dataset)
|
| 111 |
+
chirp_triggertimes_snippets/ (Group)
|
| 112 |
+
data (2, 92, 5) (float32) (Dataset)
|
| 113 |
+
starting_time (float64) (Dataset)
|
| 114 |
+
movingbar_features/ (Group)
|
| 115 |
+
bar_ds_index (92,) (float64) (Dataset)
|
| 116 |
+
bar_ds_pvalue (92,) (float64) (Dataset)
|
| 117 |
+
bar_os_index (92,) (float64) (Dataset)
|
| 118 |
+
bar_os_pvalue (92,) (float64) (Dataset)
|
| 119 |
+
bar_pref_dir (92,) (float64) (Dataset)
|
| 120 |
+
bar_pref_or (92,) (float64) (Dataset)
|
| 121 |
+
bar_pres_qidx (92,) (float64) (Dataset)
|
| 122 |
+
bar_qidx (92,) (float64) (Dataset)
|
| 123 |
+
id (92,) (int64) (Dataset)
|
| 124 |
+
roi_id (92,) (int64) (Dataset)
|
| 125 |
+
roi_table_link (92,) (int64) (Dataset)
|
| 126 |
+
movingbar_preprocessed_traces/ (Group)
|
| 127 |
+
data (998, 92) (float32) (Dataset)
|
| 128 |
+
timestamps (998,) (float64) (Dataset)
|
| 129 |
+
movingbar_snippets/ (Group)
|
| 130 |
+
data (33, 92, 24) (float32) (Dataset)
|
| 131 |
+
timestamps (33,) (float64) (Dataset)
|
| 132 |
+
movingbar_snippets_t0/ (Group)
|
| 133 |
+
id (1,) (int64) (Dataset)
|
| 134 |
+
snippets_t0_array (1, 24, 92) (float64) (Dataset)
|
| 135 |
+
movingbar_triggertimes_snippets/ (Group)
|
| 136 |
+
data (1, 92, 24) (float32) (Dataset)
|
| 137 |
+
starting_time (float64) (Dataset)
|
| 138 |
+
rois/ (Group)
|
| 139 |
+
ImageSegmentation/ (Group)
|
| 140 |
+
ROI masks/ (Group)
|
| 141 |
+
id (92,) (int64) (Dataset)
|
| 142 |
+
image_mask (92, 64, 64) (bool) (Dataset)
|
| 143 |
+
imaging_plane/ (Group)
|
| 144 |
+
OpticalChannel/ (Group)
|
| 145 |
+
description (object) (Dataset)
|
| 146 |
+
emission_lambda (float64) (Dataset)
|
| 147 |
+
description (object) (Dataset)
|
| 148 |
+
device/ (Group)
|
| 149 |
+
excitation_lambda (float64) (Dataset)
|
| 150 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 151 |
+
imaging_rate (float64) (Dataset)
|
| 152 |
+
indicator (object) (Dataset)
|
| 153 |
+
location (object) (Dataset)
|
| 154 |
+
nxpix (92,) (int64) (Dataset)
|
| 155 |
+
nypix (92,) (int64) (Dataset)
|
| 156 |
+
reference_images/ (Group)
|
| 157 |
+
roi_ids (92,) (int64) (Dataset)
|
| 158 |
+
roi_sizes (92,) (int64) (Dataset)
|
| 159 |
+
roi_sizes_um2 (92,) (float64) (Dataset)
|
| 160 |
+
session_info/ (Group)
|
| 161 |
+
presentation_sequence/ (Group)
|
| 162 |
+
absolute_start_time (2,) (object) (Dataset)
|
| 163 |
+
id (2,) (int64) (Dataset)
|
| 164 |
+
presentation_order (2,) (int64) (Dataset)
|
| 165 |
+
relative_start_time (2,) (float64) (Dataset)
|
| 166 |
+
stimulus_condition (2,) (object) (Dataset)
|
| 167 |
+
spatial/ (Group)
|
| 168 |
+
spatial_locations/ (Group)
|
| 169 |
+
field_temporal_nasal_pos_um (92,) (float64) (Dataset)
|
| 170 |
+
field_ventral_dorsal_pos_um (92,) (float64) (Dataset)
|
| 171 |
+
id (92,) (int64) (Dataset)
|
| 172 |
+
roi_id (92,) (int64) (Dataset)
|
| 173 |
+
roi_table_link (92,) (int64) (Dataset)
|
| 174 |
+
temporal_nasal_pos_um (92,) (float64) (Dataset)
|
| 175 |
+
ventral_dorsal_pos_um (92,) (float64) (Dataset)
|
| 176 |
+
session_description (object) (Dataset)
|
| 177 |
+
session_start_time (object) (Dataset)
|
| 178 |
+
specifications/ (Group)
|
| 179 |
+
core/ (Group)
|
| 180 |
+
2.8.0/ (Group)
|
| 181 |
+
namespace (object) (Dataset)
|
| 182 |
+
nwb.base (object) (Dataset)
|
| 183 |
+
nwb.behavior (object) (Dataset)
|
| 184 |
+
nwb.device (object) (Dataset)
|
| 185 |
+
nwb.ecephys (object) (Dataset)
|
| 186 |
+
nwb.epoch (object) (Dataset)
|
| 187 |
+
nwb.file (object) (Dataset)
|
| 188 |
+
nwb.icephys (object) (Dataset)
|
| 189 |
+
nwb.image (object) (Dataset)
|
| 190 |
+
nwb.misc (object) (Dataset)
|
| 191 |
+
nwb.ogen (object) (Dataset)
|
| 192 |
+
nwb.ophys (object) (Dataset)
|
| 193 |
+
nwb.retinotopy (object) (Dataset)
|
| 194 |
+
experiment-metadata/ (Group)
|
| 195 |
+
0.1.0/ (Group)
|
| 196 |
+
experiment_metadata.extensions (object) (Dataset)
|
| 197 |
+
namespace (object) (Dataset)
|
| 198 |
+
hdmf-common/ (Group)
|
| 199 |
+
1.8.0/ (Group)
|
| 200 |
+
base (object) (Dataset)
|
| 201 |
+
namespace (object) (Dataset)
|
| 202 |
+
sparse (object) (Dataset)
|
| 203 |
+
table (object) (Dataset)
|
| 204 |
+
hdmf-experimental/ (Group)
|
| 205 |
+
0.5.0/ (Group)
|
| 206 |
+
experimental (object) (Dataset)
|
| 207 |
+
namespace (object) (Dataset)
|
| 208 |
+
resources (object) (Dataset)
|
| 209 |
+
stimulus/ (Group)
|
| 210 |
+
presentation/ (Group)
|
| 211 |
+
chirp_stimulus/ (Group)
|
| 212 |
+
data (0, 0, 0) (uint8) (Dataset)
|
| 213 |
+
dimension (2,) (int64) (Dataset)
|
| 214 |
+
external_file (1,) (object) (Dataset)
|
| 215 |
+
format (object) (Dataset)
|
| 216 |
+
starting_time (float64) (Dataset)
|
| 217 |
+
movingbar_stimulus/ (Group)
|
| 218 |
+
data (0, 0, 0) (uint8) (Dataset)
|
| 219 |
+
dimension (2,) (int64) (Dataset)
|
| 220 |
+
external_file (1,) (object) (Dataset)
|
| 221 |
+
format (object) (Dataset)
|
| 222 |
+
starting_time (float64) (Dataset)
|
| 223 |
+
templates/ (Group)
|
| 224 |
+
timestamps_reference_time (object) (Dataset)
|
session_Experimenter_2_2022-07-05/experiment_1_LR/field_RGC1_structure.txt
ADDED
|
@@ -0,0 +1,224 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
NWB File Structure Report
|
| 2 |
+
========================
|
| 3 |
+
File: field_RGC1.nwb
|
| 4 |
+
Size: 26.15 MB
|
| 5 |
+
Generated: 2025-10-31 16:14:18
|
| 6 |
+
|
| 7 |
+
Structure:
|
| 8 |
+
----------
|
| 9 |
+
acquisition/ (Group)
|
| 10 |
+
TwoPhotonSeries_Cond_control_chirp_Pres_1/ (Group)
|
| 11 |
+
data (1473, 64, 64) (uint16) (Dataset)
|
| 12 |
+
imaging_plane/ (Group)
|
| 13 |
+
OpticalChannel/ (Group)
|
| 14 |
+
description (object) (Dataset)
|
| 15 |
+
emission_lambda (float64) (Dataset)
|
| 16 |
+
description (object) (Dataset)
|
| 17 |
+
device/ (Group)
|
| 18 |
+
excitation_lambda (float64) (Dataset)
|
| 19 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 20 |
+
imaging_rate (float64) (Dataset)
|
| 21 |
+
indicator (object) (Dataset)
|
| 22 |
+
location (object) (Dataset)
|
| 23 |
+
timestamps (1473,) (float64) (Dataset)
|
| 24 |
+
TwoPhotonSeries_Cond_control_movingbar_Pres_1/ (Group)
|
| 25 |
+
data (977, 64, 64) (uint16) (Dataset)
|
| 26 |
+
imaging_plane/ (Group)
|
| 27 |
+
OpticalChannel/ (Group)
|
| 28 |
+
description (object) (Dataset)
|
| 29 |
+
emission_lambda (float64) (Dataset)
|
| 30 |
+
description (object) (Dataset)
|
| 31 |
+
device/ (Group)
|
| 32 |
+
excitation_lambda (float64) (Dataset)
|
| 33 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 34 |
+
imaging_rate (float64) (Dataset)
|
| 35 |
+
indicator (object) (Dataset)
|
| 36 |
+
location (object) (Dataset)
|
| 37 |
+
timestamps (977,) (float64) (Dataset)
|
| 38 |
+
analysis/ (Group)
|
| 39 |
+
file_create_date (1,) (object) (Dataset)
|
| 40 |
+
general/ (Group)
|
| 41 |
+
devices/ (Group)
|
| 42 |
+
Microscope/ (Group)
|
| 43 |
+
experiment_metadata/ (Group)
|
| 44 |
+
experiment_number (object) (Dataset)
|
| 45 |
+
eye (object) (Dataset)
|
| 46 |
+
preparation_orientation (object) (Dataset)
|
| 47 |
+
setup_id (object) (Dataset)
|
| 48 |
+
experimenter (1,) (object) (Dataset)
|
| 49 |
+
institution (object) (Dataset)
|
| 50 |
+
lab (object) (Dataset)
|
| 51 |
+
optophysiology/ (Group)
|
| 52 |
+
ImagingPlane/ (Group)
|
| 53 |
+
OpticalChannel/ (Group)
|
| 54 |
+
description (object) (Dataset)
|
| 55 |
+
emission_lambda (float64) (Dataset)
|
| 56 |
+
description (object) (Dataset)
|
| 57 |
+
device/ (Group)
|
| 58 |
+
excitation_lambda (float64) (Dataset)
|
| 59 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 60 |
+
imaging_rate (float64) (Dataset)
|
| 61 |
+
indicator (object) (Dataset)
|
| 62 |
+
location (object) (Dataset)
|
| 63 |
+
related_publications (1,) (object) (Dataset)
|
| 64 |
+
subject/ (Group)
|
| 65 |
+
age (object) (Dataset)
|
| 66 |
+
date_of_birth (object) (Dataset)
|
| 67 |
+
genotype (object) (Dataset)
|
| 68 |
+
sex (object) (Dataset)
|
| 69 |
+
species (object) (Dataset)
|
| 70 |
+
identifier (object) (Dataset)
|
| 71 |
+
processing/ (Group)
|
| 72 |
+
Condition_control/ (Group)
|
| 73 |
+
cell_types/ (Group)
|
| 74 |
+
cluster_id (119,) (int64) (Dataset)
|
| 75 |
+
condition (119,) (object) (Dataset)
|
| 76 |
+
group_id (119,) (int64) (Dataset)
|
| 77 |
+
id (119,) (int64) (Dataset)
|
| 78 |
+
preproc_bar (119, 32) (float64) (Dataset)
|
| 79 |
+
preproc_chirp (119, 249) (float64) (Dataset)
|
| 80 |
+
prob_class (119,) (float64) (Dataset)
|
| 81 |
+
prob_cluster (119,) (float64) (Dataset)
|
| 82 |
+
prob_group (119,) (float64) (Dataset)
|
| 83 |
+
prob_supergroup (119,) (float64) (Dataset)
|
| 84 |
+
probs_per_cluster (119, 75) (float64) (Dataset)
|
| 85 |
+
roi_id (119,) (int64) (Dataset)
|
| 86 |
+
roi_table_link (119,) (int64) (Dataset)
|
| 87 |
+
supergroup (119,) (object) (Dataset)
|
| 88 |
+
chirp_60Hz_average/ (Group)
|
| 89 |
+
data (1982, 119) (float64) (Dataset)
|
| 90 |
+
timestamps (1982,) (float64) (Dataset)
|
| 91 |
+
chirp_8Hz_average/ (Group)
|
| 92 |
+
data (259, 119) (float64) (Dataset)
|
| 93 |
+
timestamps (259,) (float64) (Dataset)
|
| 94 |
+
chirp_features/ (Group)
|
| 95 |
+
chirp_on_off_index (119,) (float64) (Dataset)
|
| 96 |
+
chirp_pres_qidx (119,) (float64) (Dataset)
|
| 97 |
+
chirp_qidx (119,) (float64) (Dataset)
|
| 98 |
+
chirp_transience_index (119,) (float64) (Dataset)
|
| 99 |
+
id (119,) (int64) (Dataset)
|
| 100 |
+
roi_id (119,) (int64) (Dataset)
|
| 101 |
+
roi_table_link (119,) (int64) (Dataset)
|
| 102 |
+
chirp_preprocessed_traces/ (Group)
|
| 103 |
+
data (1473, 119) (float64) (Dataset)
|
| 104 |
+
timestamps (1473,) (float64) (Dataset)
|
| 105 |
+
chirp_snippets/ (Group)
|
| 106 |
+
data (259, 119, 5) (float64) (Dataset)
|
| 107 |
+
timestamps (259,) (float64) (Dataset)
|
| 108 |
+
chirp_snippets_t0/ (Group)
|
| 109 |
+
id (1,) (int64) (Dataset)
|
| 110 |
+
snippets_t0_array (1, 5, 119) (float64) (Dataset)
|
| 111 |
+
chirp_triggertimes_snippets/ (Group)
|
| 112 |
+
data (2, 119, 5) (float64) (Dataset)
|
| 113 |
+
starting_time (float64) (Dataset)
|
| 114 |
+
movingbar_features/ (Group)
|
| 115 |
+
bar_ds_index (119,) (float64) (Dataset)
|
| 116 |
+
bar_ds_pvalue (119,) (float64) (Dataset)
|
| 117 |
+
bar_os_index (119,) (float64) (Dataset)
|
| 118 |
+
bar_os_pvalue (119,) (float64) (Dataset)
|
| 119 |
+
bar_pref_dir (119,) (float64) (Dataset)
|
| 120 |
+
bar_pref_or (119,) (float64) (Dataset)
|
| 121 |
+
bar_pres_qidx (119,) (float64) (Dataset)
|
| 122 |
+
bar_qidx (119,) (float64) (Dataset)
|
| 123 |
+
id (119,) (int64) (Dataset)
|
| 124 |
+
roi_id (119,) (int64) (Dataset)
|
| 125 |
+
roi_table_link (119,) (int64) (Dataset)
|
| 126 |
+
movingbar_preprocessed_traces/ (Group)
|
| 127 |
+
data (977, 119) (float64) (Dataset)
|
| 128 |
+
timestamps (977,) (float64) (Dataset)
|
| 129 |
+
movingbar_snippets/ (Group)
|
| 130 |
+
data (33, 119, 24) (float32) (Dataset)
|
| 131 |
+
timestamps (33,) (float64) (Dataset)
|
| 132 |
+
movingbar_snippets_t0/ (Group)
|
| 133 |
+
id (1,) (int64) (Dataset)
|
| 134 |
+
snippets_t0_array (1, 24, 119) (float64) (Dataset)
|
| 135 |
+
movingbar_triggertimes_snippets/ (Group)
|
| 136 |
+
data (1, 119, 24) (float32) (Dataset)
|
| 137 |
+
starting_time (float64) (Dataset)
|
| 138 |
+
rois/ (Group)
|
| 139 |
+
ImageSegmentation/ (Group)
|
| 140 |
+
ROI masks/ (Group)
|
| 141 |
+
id (119,) (int64) (Dataset)
|
| 142 |
+
image_mask (119, 64, 64) (bool) (Dataset)
|
| 143 |
+
imaging_plane/ (Group)
|
| 144 |
+
OpticalChannel/ (Group)
|
| 145 |
+
description (object) (Dataset)
|
| 146 |
+
emission_lambda (float64) (Dataset)
|
| 147 |
+
description (object) (Dataset)
|
| 148 |
+
device/ (Group)
|
| 149 |
+
excitation_lambda (float64) (Dataset)
|
| 150 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 151 |
+
imaging_rate (float64) (Dataset)
|
| 152 |
+
indicator (object) (Dataset)
|
| 153 |
+
location (object) (Dataset)
|
| 154 |
+
nxpix (119,) (int64) (Dataset)
|
| 155 |
+
nypix (119,) (int64) (Dataset)
|
| 156 |
+
reference_images/ (Group)
|
| 157 |
+
roi_ids (119,) (int64) (Dataset)
|
| 158 |
+
roi_sizes (119,) (int64) (Dataset)
|
| 159 |
+
roi_sizes_um2 (119,) (float64) (Dataset)
|
| 160 |
+
session_info/ (Group)
|
| 161 |
+
presentation_sequence/ (Group)
|
| 162 |
+
absolute_start_time (2,) (object) (Dataset)
|
| 163 |
+
id (2,) (int64) (Dataset)
|
| 164 |
+
presentation_order (2,) (int64) (Dataset)
|
| 165 |
+
relative_start_time (2,) (float64) (Dataset)
|
| 166 |
+
stimulus_condition (2,) (object) (Dataset)
|
| 167 |
+
spatial/ (Group)
|
| 168 |
+
spatial_locations/ (Group)
|
| 169 |
+
field_temporal_nasal_pos_um (119,) (float64) (Dataset)
|
| 170 |
+
field_ventral_dorsal_pos_um (119,) (float64) (Dataset)
|
| 171 |
+
id (119,) (int64) (Dataset)
|
| 172 |
+
roi_id (119,) (int64) (Dataset)
|
| 173 |
+
roi_table_link (119,) (int64) (Dataset)
|
| 174 |
+
temporal_nasal_pos_um (119,) (float64) (Dataset)
|
| 175 |
+
ventral_dorsal_pos_um (119,) (float64) (Dataset)
|
| 176 |
+
session_description (object) (Dataset)
|
| 177 |
+
session_start_time (object) (Dataset)
|
| 178 |
+
specifications/ (Group)
|
| 179 |
+
core/ (Group)
|
| 180 |
+
2.8.0/ (Group)
|
| 181 |
+
namespace (object) (Dataset)
|
| 182 |
+
nwb.base (object) (Dataset)
|
| 183 |
+
nwb.behavior (object) (Dataset)
|
| 184 |
+
nwb.device (object) (Dataset)
|
| 185 |
+
nwb.ecephys (object) (Dataset)
|
| 186 |
+
nwb.epoch (object) (Dataset)
|
| 187 |
+
nwb.file (object) (Dataset)
|
| 188 |
+
nwb.icephys (object) (Dataset)
|
| 189 |
+
nwb.image (object) (Dataset)
|
| 190 |
+
nwb.misc (object) (Dataset)
|
| 191 |
+
nwb.ogen (object) (Dataset)
|
| 192 |
+
nwb.ophys (object) (Dataset)
|
| 193 |
+
nwb.retinotopy (object) (Dataset)
|
| 194 |
+
experiment-metadata/ (Group)
|
| 195 |
+
0.1.0/ (Group)
|
| 196 |
+
experiment_metadata.extensions (object) (Dataset)
|
| 197 |
+
namespace (object) (Dataset)
|
| 198 |
+
hdmf-common/ (Group)
|
| 199 |
+
1.8.0/ (Group)
|
| 200 |
+
base (object) (Dataset)
|
| 201 |
+
namespace (object) (Dataset)
|
| 202 |
+
sparse (object) (Dataset)
|
| 203 |
+
table (object) (Dataset)
|
| 204 |
+
hdmf-experimental/ (Group)
|
| 205 |
+
0.5.0/ (Group)
|
| 206 |
+
experimental (object) (Dataset)
|
| 207 |
+
namespace (object) (Dataset)
|
| 208 |
+
resources (object) (Dataset)
|
| 209 |
+
stimulus/ (Group)
|
| 210 |
+
presentation/ (Group)
|
| 211 |
+
chirp_stimulus/ (Group)
|
| 212 |
+
data (0, 0, 0) (uint8) (Dataset)
|
| 213 |
+
dimension (2,) (int64) (Dataset)
|
| 214 |
+
external_file (1,) (object) (Dataset)
|
| 215 |
+
format (object) (Dataset)
|
| 216 |
+
starting_time (float64) (Dataset)
|
| 217 |
+
movingbar_stimulus/ (Group)
|
| 218 |
+
data (0, 0, 0) (uint8) (Dataset)
|
| 219 |
+
dimension (2,) (int64) (Dataset)
|
| 220 |
+
external_file (1,) (object) (Dataset)
|
| 221 |
+
format (object) (Dataset)
|
| 222 |
+
starting_time (float64) (Dataset)
|
| 223 |
+
templates/ (Group)
|
| 224 |
+
timestamps_reference_time (object) (Dataset)
|
session_Experimenter_2_2022-07-05/experiment_1_LR/field_RGC2_structure.txt
ADDED
|
@@ -0,0 +1,224 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
NWB File Structure Report
|
| 2 |
+
========================
|
| 3 |
+
File: field_RGC2.nwb
|
| 4 |
+
Size: 26.73 MB
|
| 5 |
+
Generated: 2025-10-31 16:14:21
|
| 6 |
+
|
| 7 |
+
Structure:
|
| 8 |
+
----------
|
| 9 |
+
acquisition/ (Group)
|
| 10 |
+
TwoPhotonSeries_Cond_control_chirp_Pres_1/ (Group)
|
| 11 |
+
data (1459, 64, 64) (uint16) (Dataset)
|
| 12 |
+
imaging_plane/ (Group)
|
| 13 |
+
OpticalChannel/ (Group)
|
| 14 |
+
description (object) (Dataset)
|
| 15 |
+
emission_lambda (float64) (Dataset)
|
| 16 |
+
description (object) (Dataset)
|
| 17 |
+
device/ (Group)
|
| 18 |
+
excitation_lambda (float64) (Dataset)
|
| 19 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 20 |
+
imaging_rate (float64) (Dataset)
|
| 21 |
+
indicator (object) (Dataset)
|
| 22 |
+
location (object) (Dataset)
|
| 23 |
+
timestamps (1459,) (float64) (Dataset)
|
| 24 |
+
TwoPhotonSeries_Cond_control_movingbar_Pres_1/ (Group)
|
| 25 |
+
data (1387, 64, 64) (uint16) (Dataset)
|
| 26 |
+
imaging_plane/ (Group)
|
| 27 |
+
OpticalChannel/ (Group)
|
| 28 |
+
description (object) (Dataset)
|
| 29 |
+
emission_lambda (float64) (Dataset)
|
| 30 |
+
description (object) (Dataset)
|
| 31 |
+
device/ (Group)
|
| 32 |
+
excitation_lambda (float64) (Dataset)
|
| 33 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 34 |
+
imaging_rate (float64) (Dataset)
|
| 35 |
+
indicator (object) (Dataset)
|
| 36 |
+
location (object) (Dataset)
|
| 37 |
+
timestamps (1387,) (float64) (Dataset)
|
| 38 |
+
analysis/ (Group)
|
| 39 |
+
file_create_date (1,) (object) (Dataset)
|
| 40 |
+
general/ (Group)
|
| 41 |
+
devices/ (Group)
|
| 42 |
+
Microscope/ (Group)
|
| 43 |
+
experiment_metadata/ (Group)
|
| 44 |
+
experiment_number (object) (Dataset)
|
| 45 |
+
eye (object) (Dataset)
|
| 46 |
+
preparation_orientation (object) (Dataset)
|
| 47 |
+
setup_id (object) (Dataset)
|
| 48 |
+
experimenter (1,) (object) (Dataset)
|
| 49 |
+
institution (object) (Dataset)
|
| 50 |
+
lab (object) (Dataset)
|
| 51 |
+
optophysiology/ (Group)
|
| 52 |
+
ImagingPlane/ (Group)
|
| 53 |
+
OpticalChannel/ (Group)
|
| 54 |
+
description (object) (Dataset)
|
| 55 |
+
emission_lambda (float64) (Dataset)
|
| 56 |
+
description (object) (Dataset)
|
| 57 |
+
device/ (Group)
|
| 58 |
+
excitation_lambda (float64) (Dataset)
|
| 59 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 60 |
+
imaging_rate (float64) (Dataset)
|
| 61 |
+
indicator (object) (Dataset)
|
| 62 |
+
location (object) (Dataset)
|
| 63 |
+
related_publications (1,) (object) (Dataset)
|
| 64 |
+
subject/ (Group)
|
| 65 |
+
age (object) (Dataset)
|
| 66 |
+
date_of_birth (object) (Dataset)
|
| 67 |
+
genotype (object) (Dataset)
|
| 68 |
+
sex (object) (Dataset)
|
| 69 |
+
species (object) (Dataset)
|
| 70 |
+
identifier (object) (Dataset)
|
| 71 |
+
processing/ (Group)
|
| 72 |
+
Condition_control/ (Group)
|
| 73 |
+
cell_types/ (Group)
|
| 74 |
+
cluster_id (96,) (int64) (Dataset)
|
| 75 |
+
condition (96,) (object) (Dataset)
|
| 76 |
+
group_id (96,) (int64) (Dataset)
|
| 77 |
+
id (96,) (int64) (Dataset)
|
| 78 |
+
preproc_bar (96, 32) (float64) (Dataset)
|
| 79 |
+
preproc_chirp (96, 249) (float64) (Dataset)
|
| 80 |
+
prob_class (96,) (float64) (Dataset)
|
| 81 |
+
prob_cluster (96,) (float64) (Dataset)
|
| 82 |
+
prob_group (96,) (float64) (Dataset)
|
| 83 |
+
prob_supergroup (96,) (float64) (Dataset)
|
| 84 |
+
probs_per_cluster (96, 75) (float64) (Dataset)
|
| 85 |
+
roi_id (96,) (int64) (Dataset)
|
| 86 |
+
roi_table_link (96,) (int64) (Dataset)
|
| 87 |
+
supergroup (96,) (object) (Dataset)
|
| 88 |
+
chirp_60Hz_average/ (Group)
|
| 89 |
+
data (1982, 96) (float64) (Dataset)
|
| 90 |
+
timestamps (1982,) (float64) (Dataset)
|
| 91 |
+
chirp_8Hz_average/ (Group)
|
| 92 |
+
data (259, 96) (float64) (Dataset)
|
| 93 |
+
timestamps (259,) (float64) (Dataset)
|
| 94 |
+
chirp_features/ (Group)
|
| 95 |
+
chirp_on_off_index (96,) (float64) (Dataset)
|
| 96 |
+
chirp_pres_qidx (96,) (float64) (Dataset)
|
| 97 |
+
chirp_qidx (96,) (float64) (Dataset)
|
| 98 |
+
chirp_transience_index (96,) (float64) (Dataset)
|
| 99 |
+
id (96,) (int64) (Dataset)
|
| 100 |
+
roi_id (96,) (int64) (Dataset)
|
| 101 |
+
roi_table_link (96,) (int64) (Dataset)
|
| 102 |
+
chirp_preprocessed_traces/ (Group)
|
| 103 |
+
data (1459, 96) (float32) (Dataset)
|
| 104 |
+
timestamps (1459,) (float64) (Dataset)
|
| 105 |
+
chirp_snippets/ (Group)
|
| 106 |
+
data (259, 96, 5) (float32) (Dataset)
|
| 107 |
+
timestamps (259,) (float64) (Dataset)
|
| 108 |
+
chirp_snippets_t0/ (Group)
|
| 109 |
+
id (1,) (int64) (Dataset)
|
| 110 |
+
snippets_t0_array (1, 5, 96) (float64) (Dataset)
|
| 111 |
+
chirp_triggertimes_snippets/ (Group)
|
| 112 |
+
data (2, 96, 5) (float32) (Dataset)
|
| 113 |
+
starting_time (float64) (Dataset)
|
| 114 |
+
movingbar_features/ (Group)
|
| 115 |
+
bar_ds_index (96,) (float64) (Dataset)
|
| 116 |
+
bar_ds_pvalue (96,) (float64) (Dataset)
|
| 117 |
+
bar_os_index (96,) (float64) (Dataset)
|
| 118 |
+
bar_os_pvalue (96,) (float64) (Dataset)
|
| 119 |
+
bar_pref_dir (96,) (float64) (Dataset)
|
| 120 |
+
bar_pref_or (96,) (float64) (Dataset)
|
| 121 |
+
bar_pres_qidx (96,) (float64) (Dataset)
|
| 122 |
+
bar_qidx (96,) (float64) (Dataset)
|
| 123 |
+
id (96,) (int64) (Dataset)
|
| 124 |
+
roi_id (96,) (int64) (Dataset)
|
| 125 |
+
roi_table_link (96,) (int64) (Dataset)
|
| 126 |
+
movingbar_preprocessed_traces/ (Group)
|
| 127 |
+
data (1387, 96) (float32) (Dataset)
|
| 128 |
+
timestamps (1387,) (float64) (Dataset)
|
| 129 |
+
movingbar_snippets/ (Group)
|
| 130 |
+
data (33, 96, 24) (float32) (Dataset)
|
| 131 |
+
timestamps (33,) (float64) (Dataset)
|
| 132 |
+
movingbar_snippets_t0/ (Group)
|
| 133 |
+
id (1,) (int64) (Dataset)
|
| 134 |
+
snippets_t0_array (1, 24, 96) (float64) (Dataset)
|
| 135 |
+
movingbar_triggertimes_snippets/ (Group)
|
| 136 |
+
data (1, 96, 24) (float32) (Dataset)
|
| 137 |
+
starting_time (float64) (Dataset)
|
| 138 |
+
rois/ (Group)
|
| 139 |
+
ImageSegmentation/ (Group)
|
| 140 |
+
ROI masks/ (Group)
|
| 141 |
+
id (96,) (int64) (Dataset)
|
| 142 |
+
image_mask (96, 64, 64) (bool) (Dataset)
|
| 143 |
+
imaging_plane/ (Group)
|
| 144 |
+
OpticalChannel/ (Group)
|
| 145 |
+
description (object) (Dataset)
|
| 146 |
+
emission_lambda (float64) (Dataset)
|
| 147 |
+
description (object) (Dataset)
|
| 148 |
+
device/ (Group)
|
| 149 |
+
excitation_lambda (float64) (Dataset)
|
| 150 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 151 |
+
imaging_rate (float64) (Dataset)
|
| 152 |
+
indicator (object) (Dataset)
|
| 153 |
+
location (object) (Dataset)
|
| 154 |
+
nxpix (96,) (int64) (Dataset)
|
| 155 |
+
nypix (96,) (int64) (Dataset)
|
| 156 |
+
reference_images/ (Group)
|
| 157 |
+
roi_ids (96,) (int64) (Dataset)
|
| 158 |
+
roi_sizes (96,) (int64) (Dataset)
|
| 159 |
+
roi_sizes_um2 (96,) (float64) (Dataset)
|
| 160 |
+
session_info/ (Group)
|
| 161 |
+
presentation_sequence/ (Group)
|
| 162 |
+
absolute_start_time (2,) (object) (Dataset)
|
| 163 |
+
id (2,) (int64) (Dataset)
|
| 164 |
+
presentation_order (2,) (int64) (Dataset)
|
| 165 |
+
relative_start_time (2,) (float64) (Dataset)
|
| 166 |
+
stimulus_condition (2,) (object) (Dataset)
|
| 167 |
+
spatial/ (Group)
|
| 168 |
+
spatial_locations/ (Group)
|
| 169 |
+
field_temporal_nasal_pos_um (96,) (float64) (Dataset)
|
| 170 |
+
field_ventral_dorsal_pos_um (96,) (float64) (Dataset)
|
| 171 |
+
id (96,) (int64) (Dataset)
|
| 172 |
+
roi_id (96,) (int64) (Dataset)
|
| 173 |
+
roi_table_link (96,) (int64) (Dataset)
|
| 174 |
+
temporal_nasal_pos_um (96,) (float64) (Dataset)
|
| 175 |
+
ventral_dorsal_pos_um (96,) (float64) (Dataset)
|
| 176 |
+
session_description (object) (Dataset)
|
| 177 |
+
session_start_time (object) (Dataset)
|
| 178 |
+
specifications/ (Group)
|
| 179 |
+
core/ (Group)
|
| 180 |
+
2.8.0/ (Group)
|
| 181 |
+
namespace (object) (Dataset)
|
| 182 |
+
nwb.base (object) (Dataset)
|
| 183 |
+
nwb.behavior (object) (Dataset)
|
| 184 |
+
nwb.device (object) (Dataset)
|
| 185 |
+
nwb.ecephys (object) (Dataset)
|
| 186 |
+
nwb.epoch (object) (Dataset)
|
| 187 |
+
nwb.file (object) (Dataset)
|
| 188 |
+
nwb.icephys (object) (Dataset)
|
| 189 |
+
nwb.image (object) (Dataset)
|
| 190 |
+
nwb.misc (object) (Dataset)
|
| 191 |
+
nwb.ogen (object) (Dataset)
|
| 192 |
+
nwb.ophys (object) (Dataset)
|
| 193 |
+
nwb.retinotopy (object) (Dataset)
|
| 194 |
+
experiment-metadata/ (Group)
|
| 195 |
+
0.1.0/ (Group)
|
| 196 |
+
experiment_metadata.extensions (object) (Dataset)
|
| 197 |
+
namespace (object) (Dataset)
|
| 198 |
+
hdmf-common/ (Group)
|
| 199 |
+
1.8.0/ (Group)
|
| 200 |
+
base (object) (Dataset)
|
| 201 |
+
namespace (object) (Dataset)
|
| 202 |
+
sparse (object) (Dataset)
|
| 203 |
+
table (object) (Dataset)
|
| 204 |
+
hdmf-experimental/ (Group)
|
| 205 |
+
0.5.0/ (Group)
|
| 206 |
+
experimental (object) (Dataset)
|
| 207 |
+
namespace (object) (Dataset)
|
| 208 |
+
resources (object) (Dataset)
|
| 209 |
+
stimulus/ (Group)
|
| 210 |
+
presentation/ (Group)
|
| 211 |
+
chirp_stimulus/ (Group)
|
| 212 |
+
data (0, 0, 0) (uint8) (Dataset)
|
| 213 |
+
dimension (2,) (int64) (Dataset)
|
| 214 |
+
external_file (1,) (object) (Dataset)
|
| 215 |
+
format (object) (Dataset)
|
| 216 |
+
starting_time (float64) (Dataset)
|
| 217 |
+
movingbar_stimulus/ (Group)
|
| 218 |
+
data (0, 0, 0) (uint8) (Dataset)
|
| 219 |
+
dimension (2,) (int64) (Dataset)
|
| 220 |
+
external_file (1,) (object) (Dataset)
|
| 221 |
+
format (object) (Dataset)
|
| 222 |
+
starting_time (float64) (Dataset)
|
| 223 |
+
templates/ (Group)
|
| 224 |
+
timestamps_reference_time (object) (Dataset)
|
session_Experimenter_2_2022-07-05/experiment_1_LR/field_RGC3_structure.txt
ADDED
|
@@ -0,0 +1,224 @@
|
|
|
|
|
|
|
|
|
|
|
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|
| 1 |
+
NWB File Structure Report
|
| 2 |
+
========================
|
| 3 |
+
File: field_RGC3.nwb
|
| 4 |
+
Size: 30.75 MB
|
| 5 |
+
Generated: 2025-10-31 16:14:24
|
| 6 |
+
|
| 7 |
+
Structure:
|
| 8 |
+
----------
|
| 9 |
+
acquisition/ (Group)
|
| 10 |
+
TwoPhotonSeries_Cond_control_chirp_Pres_1/ (Group)
|
| 11 |
+
data (2000, 64, 64) (uint16) (Dataset)
|
| 12 |
+
imaging_plane/ (Group)
|
| 13 |
+
OpticalChannel/ (Group)
|
| 14 |
+
description (object) (Dataset)
|
| 15 |
+
emission_lambda (float64) (Dataset)
|
| 16 |
+
description (object) (Dataset)
|
| 17 |
+
device/ (Group)
|
| 18 |
+
excitation_lambda (float64) (Dataset)
|
| 19 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 20 |
+
imaging_rate (float64) (Dataset)
|
| 21 |
+
indicator (object) (Dataset)
|
| 22 |
+
location (object) (Dataset)
|
| 23 |
+
timestamps (2000,) (float64) (Dataset)
|
| 24 |
+
TwoPhotonSeries_Cond_control_movingbar_Pres_1/ (Group)
|
| 25 |
+
data (1060, 64, 64) (uint16) (Dataset)
|
| 26 |
+
imaging_plane/ (Group)
|
| 27 |
+
OpticalChannel/ (Group)
|
| 28 |
+
description (object) (Dataset)
|
| 29 |
+
emission_lambda (float64) (Dataset)
|
| 30 |
+
description (object) (Dataset)
|
| 31 |
+
device/ (Group)
|
| 32 |
+
excitation_lambda (float64) (Dataset)
|
| 33 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 34 |
+
imaging_rate (float64) (Dataset)
|
| 35 |
+
indicator (object) (Dataset)
|
| 36 |
+
location (object) (Dataset)
|
| 37 |
+
timestamps (1060,) (float64) (Dataset)
|
| 38 |
+
analysis/ (Group)
|
| 39 |
+
file_create_date (1,) (object) (Dataset)
|
| 40 |
+
general/ (Group)
|
| 41 |
+
devices/ (Group)
|
| 42 |
+
Microscope/ (Group)
|
| 43 |
+
experiment_metadata/ (Group)
|
| 44 |
+
experiment_number (object) (Dataset)
|
| 45 |
+
eye (object) (Dataset)
|
| 46 |
+
preparation_orientation (object) (Dataset)
|
| 47 |
+
setup_id (object) (Dataset)
|
| 48 |
+
experimenter (1,) (object) (Dataset)
|
| 49 |
+
institution (object) (Dataset)
|
| 50 |
+
lab (object) (Dataset)
|
| 51 |
+
optophysiology/ (Group)
|
| 52 |
+
ImagingPlane/ (Group)
|
| 53 |
+
OpticalChannel/ (Group)
|
| 54 |
+
description (object) (Dataset)
|
| 55 |
+
emission_lambda (float64) (Dataset)
|
| 56 |
+
description (object) (Dataset)
|
| 57 |
+
device/ (Group)
|
| 58 |
+
excitation_lambda (float64) (Dataset)
|
| 59 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 60 |
+
imaging_rate (float64) (Dataset)
|
| 61 |
+
indicator (object) (Dataset)
|
| 62 |
+
location (object) (Dataset)
|
| 63 |
+
related_publications (1,) (object) (Dataset)
|
| 64 |
+
subject/ (Group)
|
| 65 |
+
age (object) (Dataset)
|
| 66 |
+
date_of_birth (object) (Dataset)
|
| 67 |
+
genotype (object) (Dataset)
|
| 68 |
+
sex (object) (Dataset)
|
| 69 |
+
species (object) (Dataset)
|
| 70 |
+
identifier (object) (Dataset)
|
| 71 |
+
processing/ (Group)
|
| 72 |
+
Condition_control/ (Group)
|
| 73 |
+
cell_types/ (Group)
|
| 74 |
+
cluster_id (107,) (int64) (Dataset)
|
| 75 |
+
condition (107,) (object) (Dataset)
|
| 76 |
+
group_id (107,) (int64) (Dataset)
|
| 77 |
+
id (107,) (int64) (Dataset)
|
| 78 |
+
preproc_bar (107, 32) (float64) (Dataset)
|
| 79 |
+
preproc_chirp (107, 249) (float64) (Dataset)
|
| 80 |
+
prob_class (107,) (float64) (Dataset)
|
| 81 |
+
prob_cluster (107,) (float64) (Dataset)
|
| 82 |
+
prob_group (107,) (float64) (Dataset)
|
| 83 |
+
prob_supergroup (107,) (float64) (Dataset)
|
| 84 |
+
probs_per_cluster (107, 75) (float64) (Dataset)
|
| 85 |
+
roi_id (107,) (int64) (Dataset)
|
| 86 |
+
roi_table_link (107,) (int64) (Dataset)
|
| 87 |
+
supergroup (107,) (object) (Dataset)
|
| 88 |
+
chirp_60Hz_average/ (Group)
|
| 89 |
+
data (1982, 107) (float64) (Dataset)
|
| 90 |
+
timestamps (1982,) (float64) (Dataset)
|
| 91 |
+
chirp_8Hz_average/ (Group)
|
| 92 |
+
data (259, 107) (float64) (Dataset)
|
| 93 |
+
timestamps (259,) (float64) (Dataset)
|
| 94 |
+
chirp_features/ (Group)
|
| 95 |
+
chirp_on_off_index (107,) (float64) (Dataset)
|
| 96 |
+
chirp_pres_qidx (107,) (float64) (Dataset)
|
| 97 |
+
chirp_qidx (107,) (float64) (Dataset)
|
| 98 |
+
chirp_transience_index (107,) (float64) (Dataset)
|
| 99 |
+
id (107,) (int64) (Dataset)
|
| 100 |
+
roi_id (107,) (int64) (Dataset)
|
| 101 |
+
roi_table_link (107,) (int64) (Dataset)
|
| 102 |
+
chirp_preprocessed_traces/ (Group)
|
| 103 |
+
data (2000, 107) (float64) (Dataset)
|
| 104 |
+
timestamps (2000,) (float64) (Dataset)
|
| 105 |
+
chirp_snippets/ (Group)
|
| 106 |
+
data (259, 107, 5) (float64) (Dataset)
|
| 107 |
+
timestamps (259,) (float64) (Dataset)
|
| 108 |
+
chirp_snippets_t0/ (Group)
|
| 109 |
+
id (1,) (int64) (Dataset)
|
| 110 |
+
snippets_t0_array (1, 5, 107) (float64) (Dataset)
|
| 111 |
+
chirp_triggertimes_snippets/ (Group)
|
| 112 |
+
data (2, 107, 5) (float64) (Dataset)
|
| 113 |
+
starting_time (float64) (Dataset)
|
| 114 |
+
movingbar_features/ (Group)
|
| 115 |
+
bar_ds_index (107,) (float64) (Dataset)
|
| 116 |
+
bar_ds_pvalue (107,) (float64) (Dataset)
|
| 117 |
+
bar_os_index (107,) (float64) (Dataset)
|
| 118 |
+
bar_os_pvalue (107,) (float64) (Dataset)
|
| 119 |
+
bar_pref_dir (107,) (float64) (Dataset)
|
| 120 |
+
bar_pref_or (107,) (float64) (Dataset)
|
| 121 |
+
bar_pres_qidx (107,) (float64) (Dataset)
|
| 122 |
+
bar_qidx (107,) (float64) (Dataset)
|
| 123 |
+
id (107,) (int64) (Dataset)
|
| 124 |
+
roi_id (107,) (int64) (Dataset)
|
| 125 |
+
roi_table_link (107,) (int64) (Dataset)
|
| 126 |
+
movingbar_preprocessed_traces/ (Group)
|
| 127 |
+
data (1060, 107) (float64) (Dataset)
|
| 128 |
+
timestamps (1060,) (float64) (Dataset)
|
| 129 |
+
movingbar_snippets/ (Group)
|
| 130 |
+
data (33, 107, 24) (float32) (Dataset)
|
| 131 |
+
timestamps (33,) (float64) (Dataset)
|
| 132 |
+
movingbar_snippets_t0/ (Group)
|
| 133 |
+
id (1,) (int64) (Dataset)
|
| 134 |
+
snippets_t0_array (1, 24, 107) (float64) (Dataset)
|
| 135 |
+
movingbar_triggertimes_snippets/ (Group)
|
| 136 |
+
data (1, 107, 24) (float32) (Dataset)
|
| 137 |
+
starting_time (float64) (Dataset)
|
| 138 |
+
rois/ (Group)
|
| 139 |
+
ImageSegmentation/ (Group)
|
| 140 |
+
ROI masks/ (Group)
|
| 141 |
+
id (107,) (int64) (Dataset)
|
| 142 |
+
image_mask (107, 64, 64) (bool) (Dataset)
|
| 143 |
+
imaging_plane/ (Group)
|
| 144 |
+
OpticalChannel/ (Group)
|
| 145 |
+
description (object) (Dataset)
|
| 146 |
+
emission_lambda (float64) (Dataset)
|
| 147 |
+
description (object) (Dataset)
|
| 148 |
+
device/ (Group)
|
| 149 |
+
excitation_lambda (float64) (Dataset)
|
| 150 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 151 |
+
imaging_rate (float64) (Dataset)
|
| 152 |
+
indicator (object) (Dataset)
|
| 153 |
+
location (object) (Dataset)
|
| 154 |
+
nxpix (107,) (int64) (Dataset)
|
| 155 |
+
nypix (107,) (int64) (Dataset)
|
| 156 |
+
reference_images/ (Group)
|
| 157 |
+
roi_ids (107,) (int64) (Dataset)
|
| 158 |
+
roi_sizes (107,) (int64) (Dataset)
|
| 159 |
+
roi_sizes_um2 (107,) (float64) (Dataset)
|
| 160 |
+
session_info/ (Group)
|
| 161 |
+
presentation_sequence/ (Group)
|
| 162 |
+
absolute_start_time (2,) (object) (Dataset)
|
| 163 |
+
id (2,) (int64) (Dataset)
|
| 164 |
+
presentation_order (2,) (int64) (Dataset)
|
| 165 |
+
relative_start_time (2,) (float64) (Dataset)
|
| 166 |
+
stimulus_condition (2,) (object) (Dataset)
|
| 167 |
+
spatial/ (Group)
|
| 168 |
+
spatial_locations/ (Group)
|
| 169 |
+
field_temporal_nasal_pos_um (107,) (float64) (Dataset)
|
| 170 |
+
field_ventral_dorsal_pos_um (107,) (float64) (Dataset)
|
| 171 |
+
id (107,) (int64) (Dataset)
|
| 172 |
+
roi_id (107,) (int64) (Dataset)
|
| 173 |
+
roi_table_link (107,) (int64) (Dataset)
|
| 174 |
+
temporal_nasal_pos_um (107,) (float64) (Dataset)
|
| 175 |
+
ventral_dorsal_pos_um (107,) (float64) (Dataset)
|
| 176 |
+
session_description (object) (Dataset)
|
| 177 |
+
session_start_time (object) (Dataset)
|
| 178 |
+
specifications/ (Group)
|
| 179 |
+
core/ (Group)
|
| 180 |
+
2.8.0/ (Group)
|
| 181 |
+
namespace (object) (Dataset)
|
| 182 |
+
nwb.base (object) (Dataset)
|
| 183 |
+
nwb.behavior (object) (Dataset)
|
| 184 |
+
nwb.device (object) (Dataset)
|
| 185 |
+
nwb.ecephys (object) (Dataset)
|
| 186 |
+
nwb.epoch (object) (Dataset)
|
| 187 |
+
nwb.file (object) (Dataset)
|
| 188 |
+
nwb.icephys (object) (Dataset)
|
| 189 |
+
nwb.image (object) (Dataset)
|
| 190 |
+
nwb.misc (object) (Dataset)
|
| 191 |
+
nwb.ogen (object) (Dataset)
|
| 192 |
+
nwb.ophys (object) (Dataset)
|
| 193 |
+
nwb.retinotopy (object) (Dataset)
|
| 194 |
+
experiment-metadata/ (Group)
|
| 195 |
+
0.1.0/ (Group)
|
| 196 |
+
experiment_metadata.extensions (object) (Dataset)
|
| 197 |
+
namespace (object) (Dataset)
|
| 198 |
+
hdmf-common/ (Group)
|
| 199 |
+
1.8.0/ (Group)
|
| 200 |
+
base (object) (Dataset)
|
| 201 |
+
namespace (object) (Dataset)
|
| 202 |
+
sparse (object) (Dataset)
|
| 203 |
+
table (object) (Dataset)
|
| 204 |
+
hdmf-experimental/ (Group)
|
| 205 |
+
0.5.0/ (Group)
|
| 206 |
+
experimental (object) (Dataset)
|
| 207 |
+
namespace (object) (Dataset)
|
| 208 |
+
resources (object) (Dataset)
|
| 209 |
+
stimulus/ (Group)
|
| 210 |
+
presentation/ (Group)
|
| 211 |
+
chirp_stimulus/ (Group)
|
| 212 |
+
data (0, 0, 0) (uint8) (Dataset)
|
| 213 |
+
dimension (2,) (int64) (Dataset)
|
| 214 |
+
external_file (1,) (object) (Dataset)
|
| 215 |
+
format (object) (Dataset)
|
| 216 |
+
starting_time (float64) (Dataset)
|
| 217 |
+
movingbar_stimulus/ (Group)
|
| 218 |
+
data (0, 0, 0) (uint8) (Dataset)
|
| 219 |
+
dimension (2,) (int64) (Dataset)
|
| 220 |
+
external_file (1,) (object) (Dataset)
|
| 221 |
+
format (object) (Dataset)
|
| 222 |
+
starting_time (float64) (Dataset)
|
| 223 |
+
templates/ (Group)
|
| 224 |
+
timestamps_reference_time (object) (Dataset)
|
session_Experimenter_2_2022-07-05/experiment_1_LR/field_RGC4_structure.txt
ADDED
|
@@ -0,0 +1,224 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
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|
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|
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|
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|
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|
|
|
|
|
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|
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|
|
|
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|
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|
|
|
|
|
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|
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|
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|
|
|
|
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|
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|
|
|
|
|
|
|
|
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|
|
|
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|
|
|
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|
|
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|
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|
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|
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|
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|
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|
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|
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|
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|
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|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
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|
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|
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|
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|
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|
|
|
|
|
|
|
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|
|
|
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|
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|
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|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
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|
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|
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|
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|
|
|
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|
|
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|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
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|
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|
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|
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|
|
|
| 1 |
+
NWB File Structure Report
|
| 2 |
+
========================
|
| 3 |
+
File: field_RGC4.nwb
|
| 4 |
+
Size: 25.42 MB
|
| 5 |
+
Generated: 2025-10-31 16:14:26
|
| 6 |
+
|
| 7 |
+
Structure:
|
| 8 |
+
----------
|
| 9 |
+
acquisition/ (Group)
|
| 10 |
+
TwoPhotonSeries_Cond_control_chirp_Pres_1/ (Group)
|
| 11 |
+
data (1691, 64, 64) (uint16) (Dataset)
|
| 12 |
+
imaging_plane/ (Group)
|
| 13 |
+
OpticalChannel/ (Group)
|
| 14 |
+
description (object) (Dataset)
|
| 15 |
+
emission_lambda (float64) (Dataset)
|
| 16 |
+
description (object) (Dataset)
|
| 17 |
+
device/ (Group)
|
| 18 |
+
excitation_lambda (float64) (Dataset)
|
| 19 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 20 |
+
imaging_rate (float64) (Dataset)
|
| 21 |
+
indicator (object) (Dataset)
|
| 22 |
+
location (object) (Dataset)
|
| 23 |
+
timestamps (1691,) (float64) (Dataset)
|
| 24 |
+
TwoPhotonSeries_Cond_control_movingbar_Pres_1/ (Group)
|
| 25 |
+
data (1063, 64, 64) (uint16) (Dataset)
|
| 26 |
+
imaging_plane/ (Group)
|
| 27 |
+
OpticalChannel/ (Group)
|
| 28 |
+
description (object) (Dataset)
|
| 29 |
+
emission_lambda (float64) (Dataset)
|
| 30 |
+
description (object) (Dataset)
|
| 31 |
+
device/ (Group)
|
| 32 |
+
excitation_lambda (float64) (Dataset)
|
| 33 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 34 |
+
imaging_rate (float64) (Dataset)
|
| 35 |
+
indicator (object) (Dataset)
|
| 36 |
+
location (object) (Dataset)
|
| 37 |
+
timestamps (1063,) (float64) (Dataset)
|
| 38 |
+
analysis/ (Group)
|
| 39 |
+
file_create_date (1,) (object) (Dataset)
|
| 40 |
+
general/ (Group)
|
| 41 |
+
devices/ (Group)
|
| 42 |
+
Microscope/ (Group)
|
| 43 |
+
experiment_metadata/ (Group)
|
| 44 |
+
experiment_number (object) (Dataset)
|
| 45 |
+
eye (object) (Dataset)
|
| 46 |
+
preparation_orientation (object) (Dataset)
|
| 47 |
+
setup_id (object) (Dataset)
|
| 48 |
+
experimenter (1,) (object) (Dataset)
|
| 49 |
+
institution (object) (Dataset)
|
| 50 |
+
lab (object) (Dataset)
|
| 51 |
+
optophysiology/ (Group)
|
| 52 |
+
ImagingPlane/ (Group)
|
| 53 |
+
OpticalChannel/ (Group)
|
| 54 |
+
description (object) (Dataset)
|
| 55 |
+
emission_lambda (float64) (Dataset)
|
| 56 |
+
description (object) (Dataset)
|
| 57 |
+
device/ (Group)
|
| 58 |
+
excitation_lambda (float64) (Dataset)
|
| 59 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 60 |
+
imaging_rate (float64) (Dataset)
|
| 61 |
+
indicator (object) (Dataset)
|
| 62 |
+
location (object) (Dataset)
|
| 63 |
+
related_publications (1,) (object) (Dataset)
|
| 64 |
+
subject/ (Group)
|
| 65 |
+
age (object) (Dataset)
|
| 66 |
+
date_of_birth (object) (Dataset)
|
| 67 |
+
genotype (object) (Dataset)
|
| 68 |
+
sex (object) (Dataset)
|
| 69 |
+
species (object) (Dataset)
|
| 70 |
+
identifier (object) (Dataset)
|
| 71 |
+
processing/ (Group)
|
| 72 |
+
Condition_control/ (Group)
|
| 73 |
+
cell_types/ (Group)
|
| 74 |
+
cluster_id (61,) (int64) (Dataset)
|
| 75 |
+
condition (61,) (object) (Dataset)
|
| 76 |
+
group_id (61,) (int64) (Dataset)
|
| 77 |
+
id (61,) (int64) (Dataset)
|
| 78 |
+
preproc_bar (61, 32) (float64) (Dataset)
|
| 79 |
+
preproc_chirp (61, 249) (float64) (Dataset)
|
| 80 |
+
prob_class (61,) (float64) (Dataset)
|
| 81 |
+
prob_cluster (61,) (float64) (Dataset)
|
| 82 |
+
prob_group (61,) (float64) (Dataset)
|
| 83 |
+
prob_supergroup (61,) (float64) (Dataset)
|
| 84 |
+
probs_per_cluster (61, 75) (float64) (Dataset)
|
| 85 |
+
roi_id (61,) (int64) (Dataset)
|
| 86 |
+
roi_table_link (61,) (int64) (Dataset)
|
| 87 |
+
supergroup (61,) (object) (Dataset)
|
| 88 |
+
chirp_60Hz_average/ (Group)
|
| 89 |
+
data (1982, 61) (float64) (Dataset)
|
| 90 |
+
timestamps (1982,) (float64) (Dataset)
|
| 91 |
+
chirp_8Hz_average/ (Group)
|
| 92 |
+
data (259, 61) (float64) (Dataset)
|
| 93 |
+
timestamps (259,) (float64) (Dataset)
|
| 94 |
+
chirp_features/ (Group)
|
| 95 |
+
chirp_on_off_index (61,) (float64) (Dataset)
|
| 96 |
+
chirp_pres_qidx (61,) (float64) (Dataset)
|
| 97 |
+
chirp_qidx (61,) (float64) (Dataset)
|
| 98 |
+
chirp_transience_index (61,) (float64) (Dataset)
|
| 99 |
+
id (61,) (int64) (Dataset)
|
| 100 |
+
roi_id (61,) (int64) (Dataset)
|
| 101 |
+
roi_table_link (61,) (int64) (Dataset)
|
| 102 |
+
chirp_preprocessed_traces/ (Group)
|
| 103 |
+
data (1691, 61) (float64) (Dataset)
|
| 104 |
+
timestamps (1691,) (float64) (Dataset)
|
| 105 |
+
chirp_snippets/ (Group)
|
| 106 |
+
data (259, 61, 5) (float64) (Dataset)
|
| 107 |
+
timestamps (259,) (float64) (Dataset)
|
| 108 |
+
chirp_snippets_t0/ (Group)
|
| 109 |
+
id (1,) (int64) (Dataset)
|
| 110 |
+
snippets_t0_array (1, 5, 61) (float64) (Dataset)
|
| 111 |
+
chirp_triggertimes_snippets/ (Group)
|
| 112 |
+
data (2, 61, 5) (float64) (Dataset)
|
| 113 |
+
starting_time (float64) (Dataset)
|
| 114 |
+
movingbar_features/ (Group)
|
| 115 |
+
bar_ds_index (61,) (float64) (Dataset)
|
| 116 |
+
bar_ds_pvalue (61,) (float64) (Dataset)
|
| 117 |
+
bar_os_index (61,) (float64) (Dataset)
|
| 118 |
+
bar_os_pvalue (61,) (float64) (Dataset)
|
| 119 |
+
bar_pref_dir (61,) (float64) (Dataset)
|
| 120 |
+
bar_pref_or (61,) (float64) (Dataset)
|
| 121 |
+
bar_pres_qidx (61,) (float64) (Dataset)
|
| 122 |
+
bar_qidx (61,) (float64) (Dataset)
|
| 123 |
+
id (61,) (int64) (Dataset)
|
| 124 |
+
roi_id (61,) (int64) (Dataset)
|
| 125 |
+
roi_table_link (61,) (int64) (Dataset)
|
| 126 |
+
movingbar_preprocessed_traces/ (Group)
|
| 127 |
+
data (1063, 61) (float64) (Dataset)
|
| 128 |
+
timestamps (1063,) (float64) (Dataset)
|
| 129 |
+
movingbar_snippets/ (Group)
|
| 130 |
+
data (33, 61, 24) (float32) (Dataset)
|
| 131 |
+
timestamps (33,) (float64) (Dataset)
|
| 132 |
+
movingbar_snippets_t0/ (Group)
|
| 133 |
+
id (1,) (int64) (Dataset)
|
| 134 |
+
snippets_t0_array (1, 24, 61) (float64) (Dataset)
|
| 135 |
+
movingbar_triggertimes_snippets/ (Group)
|
| 136 |
+
data (1, 61, 24) (float32) (Dataset)
|
| 137 |
+
starting_time (float64) (Dataset)
|
| 138 |
+
rois/ (Group)
|
| 139 |
+
ImageSegmentation/ (Group)
|
| 140 |
+
ROI masks/ (Group)
|
| 141 |
+
id (61,) (int64) (Dataset)
|
| 142 |
+
image_mask (61, 64, 64) (bool) (Dataset)
|
| 143 |
+
imaging_plane/ (Group)
|
| 144 |
+
OpticalChannel/ (Group)
|
| 145 |
+
description (object) (Dataset)
|
| 146 |
+
emission_lambda (float64) (Dataset)
|
| 147 |
+
description (object) (Dataset)
|
| 148 |
+
device/ (Group)
|
| 149 |
+
excitation_lambda (float64) (Dataset)
|
| 150 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 151 |
+
imaging_rate (float64) (Dataset)
|
| 152 |
+
indicator (object) (Dataset)
|
| 153 |
+
location (object) (Dataset)
|
| 154 |
+
nxpix (61,) (int64) (Dataset)
|
| 155 |
+
nypix (61,) (int64) (Dataset)
|
| 156 |
+
reference_images/ (Group)
|
| 157 |
+
roi_ids (61,) (int64) (Dataset)
|
| 158 |
+
roi_sizes (61,) (int64) (Dataset)
|
| 159 |
+
roi_sizes_um2 (61,) (float64) (Dataset)
|
| 160 |
+
session_info/ (Group)
|
| 161 |
+
presentation_sequence/ (Group)
|
| 162 |
+
absolute_start_time (2,) (object) (Dataset)
|
| 163 |
+
id (2,) (int64) (Dataset)
|
| 164 |
+
presentation_order (2,) (int64) (Dataset)
|
| 165 |
+
relative_start_time (2,) (float64) (Dataset)
|
| 166 |
+
stimulus_condition (2,) (object) (Dataset)
|
| 167 |
+
spatial/ (Group)
|
| 168 |
+
spatial_locations/ (Group)
|
| 169 |
+
field_temporal_nasal_pos_um (61,) (float64) (Dataset)
|
| 170 |
+
field_ventral_dorsal_pos_um (61,) (float64) (Dataset)
|
| 171 |
+
id (61,) (int64) (Dataset)
|
| 172 |
+
roi_id (61,) (int64) (Dataset)
|
| 173 |
+
roi_table_link (61,) (int64) (Dataset)
|
| 174 |
+
temporal_nasal_pos_um (61,) (float64) (Dataset)
|
| 175 |
+
ventral_dorsal_pos_um (61,) (float64) (Dataset)
|
| 176 |
+
session_description (object) (Dataset)
|
| 177 |
+
session_start_time (object) (Dataset)
|
| 178 |
+
specifications/ (Group)
|
| 179 |
+
core/ (Group)
|
| 180 |
+
2.8.0/ (Group)
|
| 181 |
+
namespace (object) (Dataset)
|
| 182 |
+
nwb.base (object) (Dataset)
|
| 183 |
+
nwb.behavior (object) (Dataset)
|
| 184 |
+
nwb.device (object) (Dataset)
|
| 185 |
+
nwb.ecephys (object) (Dataset)
|
| 186 |
+
nwb.epoch (object) (Dataset)
|
| 187 |
+
nwb.file (object) (Dataset)
|
| 188 |
+
nwb.icephys (object) (Dataset)
|
| 189 |
+
nwb.image (object) (Dataset)
|
| 190 |
+
nwb.misc (object) (Dataset)
|
| 191 |
+
nwb.ogen (object) (Dataset)
|
| 192 |
+
nwb.ophys (object) (Dataset)
|
| 193 |
+
nwb.retinotopy (object) (Dataset)
|
| 194 |
+
experiment-metadata/ (Group)
|
| 195 |
+
0.1.0/ (Group)
|
| 196 |
+
experiment_metadata.extensions (object) (Dataset)
|
| 197 |
+
namespace (object) (Dataset)
|
| 198 |
+
hdmf-common/ (Group)
|
| 199 |
+
1.8.0/ (Group)
|
| 200 |
+
base (object) (Dataset)
|
| 201 |
+
namespace (object) (Dataset)
|
| 202 |
+
sparse (object) (Dataset)
|
| 203 |
+
table (object) (Dataset)
|
| 204 |
+
hdmf-experimental/ (Group)
|
| 205 |
+
0.5.0/ (Group)
|
| 206 |
+
experimental (object) (Dataset)
|
| 207 |
+
namespace (object) (Dataset)
|
| 208 |
+
resources (object) (Dataset)
|
| 209 |
+
stimulus/ (Group)
|
| 210 |
+
presentation/ (Group)
|
| 211 |
+
chirp_stimulus/ (Group)
|
| 212 |
+
data (0, 0, 0) (uint8) (Dataset)
|
| 213 |
+
dimension (2,) (int64) (Dataset)
|
| 214 |
+
external_file (1,) (object) (Dataset)
|
| 215 |
+
format (object) (Dataset)
|
| 216 |
+
starting_time (float64) (Dataset)
|
| 217 |
+
movingbar_stimulus/ (Group)
|
| 218 |
+
data (0, 0, 0) (uint8) (Dataset)
|
| 219 |
+
dimension (2,) (int64) (Dataset)
|
| 220 |
+
external_file (1,) (object) (Dataset)
|
| 221 |
+
format (object) (Dataset)
|
| 222 |
+
starting_time (float64) (Dataset)
|
| 223 |
+
templates/ (Group)
|
| 224 |
+
timestamps_reference_time (object) (Dataset)
|
session_Experimenter_2_2022-07-19/experiment_1_LR/field_RGC0_structure.txt
ADDED
|
@@ -0,0 +1,224 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
NWB File Structure Report
|
| 2 |
+
========================
|
| 3 |
+
File: field_RGC0.nwb
|
| 4 |
+
Size: 27.46 MB
|
| 5 |
+
Generated: 2025-10-31 16:14:29
|
| 6 |
+
|
| 7 |
+
Structure:
|
| 8 |
+
----------
|
| 9 |
+
acquisition/ (Group)
|
| 10 |
+
TwoPhotonSeries_Cond_control_chirp_Pres_1/ (Group)
|
| 11 |
+
data (1466, 64, 64) (uint16) (Dataset)
|
| 12 |
+
imaging_plane/ (Group)
|
| 13 |
+
OpticalChannel/ (Group)
|
| 14 |
+
description (object) (Dataset)
|
| 15 |
+
emission_lambda (float64) (Dataset)
|
| 16 |
+
description (object) (Dataset)
|
| 17 |
+
device/ (Group)
|
| 18 |
+
excitation_lambda (float64) (Dataset)
|
| 19 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 20 |
+
imaging_rate (float64) (Dataset)
|
| 21 |
+
indicator (object) (Dataset)
|
| 22 |
+
location (object) (Dataset)
|
| 23 |
+
timestamps (1466,) (float64) (Dataset)
|
| 24 |
+
TwoPhotonSeries_Cond_control_movingbar_Pres_1/ (Group)
|
| 25 |
+
data (1322, 64, 64) (uint16) (Dataset)
|
| 26 |
+
imaging_plane/ (Group)
|
| 27 |
+
OpticalChannel/ (Group)
|
| 28 |
+
description (object) (Dataset)
|
| 29 |
+
emission_lambda (float64) (Dataset)
|
| 30 |
+
description (object) (Dataset)
|
| 31 |
+
device/ (Group)
|
| 32 |
+
excitation_lambda (float64) (Dataset)
|
| 33 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 34 |
+
imaging_rate (float64) (Dataset)
|
| 35 |
+
indicator (object) (Dataset)
|
| 36 |
+
location (object) (Dataset)
|
| 37 |
+
timestamps (1322,) (float64) (Dataset)
|
| 38 |
+
analysis/ (Group)
|
| 39 |
+
file_create_date (1,) (object) (Dataset)
|
| 40 |
+
general/ (Group)
|
| 41 |
+
devices/ (Group)
|
| 42 |
+
Microscope/ (Group)
|
| 43 |
+
experiment_metadata/ (Group)
|
| 44 |
+
experiment_number (object) (Dataset)
|
| 45 |
+
eye (object) (Dataset)
|
| 46 |
+
preparation_orientation (object) (Dataset)
|
| 47 |
+
setup_id (object) (Dataset)
|
| 48 |
+
experimenter (1,) (object) (Dataset)
|
| 49 |
+
institution (object) (Dataset)
|
| 50 |
+
lab (object) (Dataset)
|
| 51 |
+
optophysiology/ (Group)
|
| 52 |
+
ImagingPlane/ (Group)
|
| 53 |
+
OpticalChannel/ (Group)
|
| 54 |
+
description (object) (Dataset)
|
| 55 |
+
emission_lambda (float64) (Dataset)
|
| 56 |
+
description (object) (Dataset)
|
| 57 |
+
device/ (Group)
|
| 58 |
+
excitation_lambda (float64) (Dataset)
|
| 59 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 60 |
+
imaging_rate (float64) (Dataset)
|
| 61 |
+
indicator (object) (Dataset)
|
| 62 |
+
location (object) (Dataset)
|
| 63 |
+
related_publications (1,) (object) (Dataset)
|
| 64 |
+
subject/ (Group)
|
| 65 |
+
age (object) (Dataset)
|
| 66 |
+
date_of_birth (object) (Dataset)
|
| 67 |
+
genotype (object) (Dataset)
|
| 68 |
+
sex (object) (Dataset)
|
| 69 |
+
species (object) (Dataset)
|
| 70 |
+
identifier (object) (Dataset)
|
| 71 |
+
processing/ (Group)
|
| 72 |
+
Condition_control/ (Group)
|
| 73 |
+
cell_types/ (Group)
|
| 74 |
+
cluster_id (124,) (int64) (Dataset)
|
| 75 |
+
condition (124,) (object) (Dataset)
|
| 76 |
+
group_id (124,) (int64) (Dataset)
|
| 77 |
+
id (124,) (int64) (Dataset)
|
| 78 |
+
preproc_bar (124, 32) (float64) (Dataset)
|
| 79 |
+
preproc_chirp (124, 249) (float64) (Dataset)
|
| 80 |
+
prob_class (124,) (float64) (Dataset)
|
| 81 |
+
prob_cluster (124,) (float64) (Dataset)
|
| 82 |
+
prob_group (124,) (float64) (Dataset)
|
| 83 |
+
prob_supergroup (124,) (float64) (Dataset)
|
| 84 |
+
probs_per_cluster (124, 75) (float64) (Dataset)
|
| 85 |
+
roi_id (124,) (int64) (Dataset)
|
| 86 |
+
roi_table_link (124,) (int64) (Dataset)
|
| 87 |
+
supergroup (124,) (object) (Dataset)
|
| 88 |
+
chirp_60Hz_average/ (Group)
|
| 89 |
+
data (1982, 124) (float64) (Dataset)
|
| 90 |
+
timestamps (1982,) (float64) (Dataset)
|
| 91 |
+
chirp_8Hz_average/ (Group)
|
| 92 |
+
data (259, 124) (float64) (Dataset)
|
| 93 |
+
timestamps (259,) (float64) (Dataset)
|
| 94 |
+
chirp_features/ (Group)
|
| 95 |
+
chirp_on_off_index (124,) (float64) (Dataset)
|
| 96 |
+
chirp_pres_qidx (124,) (float64) (Dataset)
|
| 97 |
+
chirp_qidx (124,) (float64) (Dataset)
|
| 98 |
+
chirp_transience_index (124,) (float64) (Dataset)
|
| 99 |
+
id (124,) (int64) (Dataset)
|
| 100 |
+
roi_id (124,) (int64) (Dataset)
|
| 101 |
+
roi_table_link (124,) (int64) (Dataset)
|
| 102 |
+
chirp_preprocessed_traces/ (Group)
|
| 103 |
+
data (1466, 124) (float32) (Dataset)
|
| 104 |
+
timestamps (1466,) (float64) (Dataset)
|
| 105 |
+
chirp_snippets/ (Group)
|
| 106 |
+
data (259, 124, 5) (float32) (Dataset)
|
| 107 |
+
timestamps (259,) (float64) (Dataset)
|
| 108 |
+
chirp_snippets_t0/ (Group)
|
| 109 |
+
id (1,) (int64) (Dataset)
|
| 110 |
+
snippets_t0_array (1, 5, 124) (float64) (Dataset)
|
| 111 |
+
chirp_triggertimes_snippets/ (Group)
|
| 112 |
+
data (2, 124, 5) (float32) (Dataset)
|
| 113 |
+
starting_time (float64) (Dataset)
|
| 114 |
+
movingbar_features/ (Group)
|
| 115 |
+
bar_ds_index (124,) (float64) (Dataset)
|
| 116 |
+
bar_ds_pvalue (124,) (float64) (Dataset)
|
| 117 |
+
bar_os_index (124,) (float64) (Dataset)
|
| 118 |
+
bar_os_pvalue (124,) (float64) (Dataset)
|
| 119 |
+
bar_pref_dir (124,) (float64) (Dataset)
|
| 120 |
+
bar_pref_or (124,) (float64) (Dataset)
|
| 121 |
+
bar_pres_qidx (124,) (float64) (Dataset)
|
| 122 |
+
bar_qidx (124,) (float64) (Dataset)
|
| 123 |
+
id (124,) (int64) (Dataset)
|
| 124 |
+
roi_id (124,) (int64) (Dataset)
|
| 125 |
+
roi_table_link (124,) (int64) (Dataset)
|
| 126 |
+
movingbar_preprocessed_traces/ (Group)
|
| 127 |
+
data (1322, 124) (float32) (Dataset)
|
| 128 |
+
timestamps (1322,) (float64) (Dataset)
|
| 129 |
+
movingbar_snippets/ (Group)
|
| 130 |
+
data (33, 124, 24) (float32) (Dataset)
|
| 131 |
+
timestamps (33,) (float64) (Dataset)
|
| 132 |
+
movingbar_snippets_t0/ (Group)
|
| 133 |
+
id (1,) (int64) (Dataset)
|
| 134 |
+
snippets_t0_array (1, 24, 124) (float64) (Dataset)
|
| 135 |
+
movingbar_triggertimes_snippets/ (Group)
|
| 136 |
+
data (1, 124, 24) (float32) (Dataset)
|
| 137 |
+
starting_time (float64) (Dataset)
|
| 138 |
+
rois/ (Group)
|
| 139 |
+
ImageSegmentation/ (Group)
|
| 140 |
+
ROI masks/ (Group)
|
| 141 |
+
id (124,) (int64) (Dataset)
|
| 142 |
+
image_mask (124, 64, 64) (bool) (Dataset)
|
| 143 |
+
imaging_plane/ (Group)
|
| 144 |
+
OpticalChannel/ (Group)
|
| 145 |
+
description (object) (Dataset)
|
| 146 |
+
emission_lambda (float64) (Dataset)
|
| 147 |
+
description (object) (Dataset)
|
| 148 |
+
device/ (Group)
|
| 149 |
+
excitation_lambda (float64) (Dataset)
|
| 150 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 151 |
+
imaging_rate (float64) (Dataset)
|
| 152 |
+
indicator (object) (Dataset)
|
| 153 |
+
location (object) (Dataset)
|
| 154 |
+
nxpix (124,) (int64) (Dataset)
|
| 155 |
+
nypix (124,) (int64) (Dataset)
|
| 156 |
+
reference_images/ (Group)
|
| 157 |
+
roi_ids (124,) (int64) (Dataset)
|
| 158 |
+
roi_sizes (124,) (int64) (Dataset)
|
| 159 |
+
roi_sizes_um2 (124,) (float64) (Dataset)
|
| 160 |
+
session_info/ (Group)
|
| 161 |
+
presentation_sequence/ (Group)
|
| 162 |
+
absolute_start_time (2,) (object) (Dataset)
|
| 163 |
+
id (2,) (int64) (Dataset)
|
| 164 |
+
presentation_order (2,) (int64) (Dataset)
|
| 165 |
+
relative_start_time (2,) (float64) (Dataset)
|
| 166 |
+
stimulus_condition (2,) (object) (Dataset)
|
| 167 |
+
spatial/ (Group)
|
| 168 |
+
spatial_locations/ (Group)
|
| 169 |
+
field_temporal_nasal_pos_um (124,) (float64) (Dataset)
|
| 170 |
+
field_ventral_dorsal_pos_um (124,) (float64) (Dataset)
|
| 171 |
+
id (124,) (int64) (Dataset)
|
| 172 |
+
roi_id (124,) (int64) (Dataset)
|
| 173 |
+
roi_table_link (124,) (int64) (Dataset)
|
| 174 |
+
temporal_nasal_pos_um (124,) (float64) (Dataset)
|
| 175 |
+
ventral_dorsal_pos_um (124,) (float64) (Dataset)
|
| 176 |
+
session_description (object) (Dataset)
|
| 177 |
+
session_start_time (object) (Dataset)
|
| 178 |
+
specifications/ (Group)
|
| 179 |
+
core/ (Group)
|
| 180 |
+
2.8.0/ (Group)
|
| 181 |
+
namespace (object) (Dataset)
|
| 182 |
+
nwb.base (object) (Dataset)
|
| 183 |
+
nwb.behavior (object) (Dataset)
|
| 184 |
+
nwb.device (object) (Dataset)
|
| 185 |
+
nwb.ecephys (object) (Dataset)
|
| 186 |
+
nwb.epoch (object) (Dataset)
|
| 187 |
+
nwb.file (object) (Dataset)
|
| 188 |
+
nwb.icephys (object) (Dataset)
|
| 189 |
+
nwb.image (object) (Dataset)
|
| 190 |
+
nwb.misc (object) (Dataset)
|
| 191 |
+
nwb.ogen (object) (Dataset)
|
| 192 |
+
nwb.ophys (object) (Dataset)
|
| 193 |
+
nwb.retinotopy (object) (Dataset)
|
| 194 |
+
experiment-metadata/ (Group)
|
| 195 |
+
0.1.0/ (Group)
|
| 196 |
+
experiment_metadata.extensions (object) (Dataset)
|
| 197 |
+
namespace (object) (Dataset)
|
| 198 |
+
hdmf-common/ (Group)
|
| 199 |
+
1.8.0/ (Group)
|
| 200 |
+
base (object) (Dataset)
|
| 201 |
+
namespace (object) (Dataset)
|
| 202 |
+
sparse (object) (Dataset)
|
| 203 |
+
table (object) (Dataset)
|
| 204 |
+
hdmf-experimental/ (Group)
|
| 205 |
+
0.5.0/ (Group)
|
| 206 |
+
experimental (object) (Dataset)
|
| 207 |
+
namespace (object) (Dataset)
|
| 208 |
+
resources (object) (Dataset)
|
| 209 |
+
stimulus/ (Group)
|
| 210 |
+
presentation/ (Group)
|
| 211 |
+
chirp_stimulus/ (Group)
|
| 212 |
+
data (0, 0, 0) (uint8) (Dataset)
|
| 213 |
+
dimension (2,) (int64) (Dataset)
|
| 214 |
+
external_file (1,) (object) (Dataset)
|
| 215 |
+
format (object) (Dataset)
|
| 216 |
+
starting_time (float64) (Dataset)
|
| 217 |
+
movingbar_stimulus/ (Group)
|
| 218 |
+
data (0, 0, 0) (uint8) (Dataset)
|
| 219 |
+
dimension (2,) (int64) (Dataset)
|
| 220 |
+
external_file (1,) (object) (Dataset)
|
| 221 |
+
format (object) (Dataset)
|
| 222 |
+
starting_time (float64) (Dataset)
|
| 223 |
+
templates/ (Group)
|
| 224 |
+
timestamps_reference_time (object) (Dataset)
|
session_Experimenter_2_2022-07-19/experiment_1_LR/field_RGC1_structure.txt
ADDED
|
@@ -0,0 +1,224 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
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|
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|
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|
|
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|
|
|
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|
|
|
|
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|
|
|
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|
|
|
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|
|
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|
|
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|
|
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|
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|
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|
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|
|
|
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|
|
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|
|
|
|
|
|
|
|
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|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
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|
|
|
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|
|
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|
|
|
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|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
NWB File Structure Report
|
| 2 |
+
========================
|
| 3 |
+
File: field_RGC1.nwb
|
| 4 |
+
Size: 29.46 MB
|
| 5 |
+
Generated: 2025-10-31 16:14:32
|
| 6 |
+
|
| 7 |
+
Structure:
|
| 8 |
+
----------
|
| 9 |
+
acquisition/ (Group)
|
| 10 |
+
TwoPhotonSeries_Cond_control_chirp_Pres_1/ (Group)
|
| 11 |
+
data (1486, 64, 64) (uint16) (Dataset)
|
| 12 |
+
imaging_plane/ (Group)
|
| 13 |
+
OpticalChannel/ (Group)
|
| 14 |
+
description (object) (Dataset)
|
| 15 |
+
emission_lambda (float64) (Dataset)
|
| 16 |
+
description (object) (Dataset)
|
| 17 |
+
device/ (Group)
|
| 18 |
+
excitation_lambda (float64) (Dataset)
|
| 19 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 20 |
+
imaging_rate (float64) (Dataset)
|
| 21 |
+
indicator (object) (Dataset)
|
| 22 |
+
location (object) (Dataset)
|
| 23 |
+
timestamps (1486,) (float64) (Dataset)
|
| 24 |
+
TwoPhotonSeries_Cond_control_movingbar_Pres_1/ (Group)
|
| 25 |
+
data (1586, 64, 64) (uint16) (Dataset)
|
| 26 |
+
imaging_plane/ (Group)
|
| 27 |
+
OpticalChannel/ (Group)
|
| 28 |
+
description (object) (Dataset)
|
| 29 |
+
emission_lambda (float64) (Dataset)
|
| 30 |
+
description (object) (Dataset)
|
| 31 |
+
device/ (Group)
|
| 32 |
+
excitation_lambda (float64) (Dataset)
|
| 33 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 34 |
+
imaging_rate (float64) (Dataset)
|
| 35 |
+
indicator (object) (Dataset)
|
| 36 |
+
location (object) (Dataset)
|
| 37 |
+
timestamps (1586,) (float64) (Dataset)
|
| 38 |
+
analysis/ (Group)
|
| 39 |
+
file_create_date (1,) (object) (Dataset)
|
| 40 |
+
general/ (Group)
|
| 41 |
+
devices/ (Group)
|
| 42 |
+
Microscope/ (Group)
|
| 43 |
+
experiment_metadata/ (Group)
|
| 44 |
+
experiment_number (object) (Dataset)
|
| 45 |
+
eye (object) (Dataset)
|
| 46 |
+
preparation_orientation (object) (Dataset)
|
| 47 |
+
setup_id (object) (Dataset)
|
| 48 |
+
experimenter (1,) (object) (Dataset)
|
| 49 |
+
institution (object) (Dataset)
|
| 50 |
+
lab (object) (Dataset)
|
| 51 |
+
optophysiology/ (Group)
|
| 52 |
+
ImagingPlane/ (Group)
|
| 53 |
+
OpticalChannel/ (Group)
|
| 54 |
+
description (object) (Dataset)
|
| 55 |
+
emission_lambda (float64) (Dataset)
|
| 56 |
+
description (object) (Dataset)
|
| 57 |
+
device/ (Group)
|
| 58 |
+
excitation_lambda (float64) (Dataset)
|
| 59 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 60 |
+
imaging_rate (float64) (Dataset)
|
| 61 |
+
indicator (object) (Dataset)
|
| 62 |
+
location (object) (Dataset)
|
| 63 |
+
related_publications (1,) (object) (Dataset)
|
| 64 |
+
subject/ (Group)
|
| 65 |
+
age (object) (Dataset)
|
| 66 |
+
date_of_birth (object) (Dataset)
|
| 67 |
+
genotype (object) (Dataset)
|
| 68 |
+
sex (object) (Dataset)
|
| 69 |
+
species (object) (Dataset)
|
| 70 |
+
identifier (object) (Dataset)
|
| 71 |
+
processing/ (Group)
|
| 72 |
+
Condition_control/ (Group)
|
| 73 |
+
cell_types/ (Group)
|
| 74 |
+
cluster_id (84,) (int64) (Dataset)
|
| 75 |
+
condition (84,) (object) (Dataset)
|
| 76 |
+
group_id (84,) (int64) (Dataset)
|
| 77 |
+
id (84,) (int64) (Dataset)
|
| 78 |
+
preproc_bar (84, 32) (float64) (Dataset)
|
| 79 |
+
preproc_chirp (84, 249) (float64) (Dataset)
|
| 80 |
+
prob_class (84,) (float64) (Dataset)
|
| 81 |
+
prob_cluster (84,) (float64) (Dataset)
|
| 82 |
+
prob_group (84,) (float64) (Dataset)
|
| 83 |
+
prob_supergroup (84,) (float64) (Dataset)
|
| 84 |
+
probs_per_cluster (84, 75) (float64) (Dataset)
|
| 85 |
+
roi_id (84,) (int64) (Dataset)
|
| 86 |
+
roi_table_link (84,) (int64) (Dataset)
|
| 87 |
+
supergroup (84,) (object) (Dataset)
|
| 88 |
+
chirp_60Hz_average/ (Group)
|
| 89 |
+
data (1982, 84) (float64) (Dataset)
|
| 90 |
+
timestamps (1982,) (float64) (Dataset)
|
| 91 |
+
chirp_8Hz_average/ (Group)
|
| 92 |
+
data (259, 84) (float64) (Dataset)
|
| 93 |
+
timestamps (259,) (float64) (Dataset)
|
| 94 |
+
chirp_features/ (Group)
|
| 95 |
+
chirp_on_off_index (84,) (float64) (Dataset)
|
| 96 |
+
chirp_pres_qidx (84,) (float64) (Dataset)
|
| 97 |
+
chirp_qidx (84,) (float64) (Dataset)
|
| 98 |
+
chirp_transience_index (84,) (float64) (Dataset)
|
| 99 |
+
id (84,) (int64) (Dataset)
|
| 100 |
+
roi_id (84,) (int64) (Dataset)
|
| 101 |
+
roi_table_link (84,) (int64) (Dataset)
|
| 102 |
+
chirp_preprocessed_traces/ (Group)
|
| 103 |
+
data (1486, 84) (float64) (Dataset)
|
| 104 |
+
timestamps (1486,) (float64) (Dataset)
|
| 105 |
+
chirp_snippets/ (Group)
|
| 106 |
+
data (259, 84, 5) (float64) (Dataset)
|
| 107 |
+
timestamps (259,) (float64) (Dataset)
|
| 108 |
+
chirp_snippets_t0/ (Group)
|
| 109 |
+
id (1,) (int64) (Dataset)
|
| 110 |
+
snippets_t0_array (1, 5, 84) (float64) (Dataset)
|
| 111 |
+
chirp_triggertimes_snippets/ (Group)
|
| 112 |
+
data (2, 84, 5) (float64) (Dataset)
|
| 113 |
+
starting_time (float64) (Dataset)
|
| 114 |
+
movingbar_features/ (Group)
|
| 115 |
+
bar_ds_index (84,) (float64) (Dataset)
|
| 116 |
+
bar_ds_pvalue (84,) (float64) (Dataset)
|
| 117 |
+
bar_os_index (84,) (float64) (Dataset)
|
| 118 |
+
bar_os_pvalue (84,) (float64) (Dataset)
|
| 119 |
+
bar_pref_dir (84,) (float64) (Dataset)
|
| 120 |
+
bar_pref_or (84,) (float64) (Dataset)
|
| 121 |
+
bar_pres_qidx (84,) (float64) (Dataset)
|
| 122 |
+
bar_qidx (84,) (float64) (Dataset)
|
| 123 |
+
id (84,) (int64) (Dataset)
|
| 124 |
+
roi_id (84,) (int64) (Dataset)
|
| 125 |
+
roi_table_link (84,) (int64) (Dataset)
|
| 126 |
+
movingbar_preprocessed_traces/ (Group)
|
| 127 |
+
data (1586, 84) (float64) (Dataset)
|
| 128 |
+
timestamps (1586,) (float64) (Dataset)
|
| 129 |
+
movingbar_snippets/ (Group)
|
| 130 |
+
data (33, 84, 24) (float32) (Dataset)
|
| 131 |
+
timestamps (33,) (float64) (Dataset)
|
| 132 |
+
movingbar_snippets_t0/ (Group)
|
| 133 |
+
id (1,) (int64) (Dataset)
|
| 134 |
+
snippets_t0_array (1, 24, 84) (float64) (Dataset)
|
| 135 |
+
movingbar_triggertimes_snippets/ (Group)
|
| 136 |
+
data (1, 84, 24) (float32) (Dataset)
|
| 137 |
+
starting_time (float64) (Dataset)
|
| 138 |
+
rois/ (Group)
|
| 139 |
+
ImageSegmentation/ (Group)
|
| 140 |
+
ROI masks/ (Group)
|
| 141 |
+
id (84,) (int64) (Dataset)
|
| 142 |
+
image_mask (84, 64, 64) (bool) (Dataset)
|
| 143 |
+
imaging_plane/ (Group)
|
| 144 |
+
OpticalChannel/ (Group)
|
| 145 |
+
description (object) (Dataset)
|
| 146 |
+
emission_lambda (float64) (Dataset)
|
| 147 |
+
description (object) (Dataset)
|
| 148 |
+
device/ (Group)
|
| 149 |
+
excitation_lambda (float64) (Dataset)
|
| 150 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 151 |
+
imaging_rate (float64) (Dataset)
|
| 152 |
+
indicator (object) (Dataset)
|
| 153 |
+
location (object) (Dataset)
|
| 154 |
+
nxpix (84,) (int64) (Dataset)
|
| 155 |
+
nypix (84,) (int64) (Dataset)
|
| 156 |
+
reference_images/ (Group)
|
| 157 |
+
roi_ids (84,) (int64) (Dataset)
|
| 158 |
+
roi_sizes (84,) (int64) (Dataset)
|
| 159 |
+
roi_sizes_um2 (84,) (float64) (Dataset)
|
| 160 |
+
session_info/ (Group)
|
| 161 |
+
presentation_sequence/ (Group)
|
| 162 |
+
absolute_start_time (2,) (object) (Dataset)
|
| 163 |
+
id (2,) (int64) (Dataset)
|
| 164 |
+
presentation_order (2,) (int64) (Dataset)
|
| 165 |
+
relative_start_time (2,) (float64) (Dataset)
|
| 166 |
+
stimulus_condition (2,) (object) (Dataset)
|
| 167 |
+
spatial/ (Group)
|
| 168 |
+
spatial_locations/ (Group)
|
| 169 |
+
field_temporal_nasal_pos_um (84,) (float64) (Dataset)
|
| 170 |
+
field_ventral_dorsal_pos_um (84,) (float64) (Dataset)
|
| 171 |
+
id (84,) (int64) (Dataset)
|
| 172 |
+
roi_id (84,) (int64) (Dataset)
|
| 173 |
+
roi_table_link (84,) (int64) (Dataset)
|
| 174 |
+
temporal_nasal_pos_um (84,) (float64) (Dataset)
|
| 175 |
+
ventral_dorsal_pos_um (84,) (float64) (Dataset)
|
| 176 |
+
session_description (object) (Dataset)
|
| 177 |
+
session_start_time (object) (Dataset)
|
| 178 |
+
specifications/ (Group)
|
| 179 |
+
core/ (Group)
|
| 180 |
+
2.8.0/ (Group)
|
| 181 |
+
namespace (object) (Dataset)
|
| 182 |
+
nwb.base (object) (Dataset)
|
| 183 |
+
nwb.behavior (object) (Dataset)
|
| 184 |
+
nwb.device (object) (Dataset)
|
| 185 |
+
nwb.ecephys (object) (Dataset)
|
| 186 |
+
nwb.epoch (object) (Dataset)
|
| 187 |
+
nwb.file (object) (Dataset)
|
| 188 |
+
nwb.icephys (object) (Dataset)
|
| 189 |
+
nwb.image (object) (Dataset)
|
| 190 |
+
nwb.misc (object) (Dataset)
|
| 191 |
+
nwb.ogen (object) (Dataset)
|
| 192 |
+
nwb.ophys (object) (Dataset)
|
| 193 |
+
nwb.retinotopy (object) (Dataset)
|
| 194 |
+
experiment-metadata/ (Group)
|
| 195 |
+
0.1.0/ (Group)
|
| 196 |
+
experiment_metadata.extensions (object) (Dataset)
|
| 197 |
+
namespace (object) (Dataset)
|
| 198 |
+
hdmf-common/ (Group)
|
| 199 |
+
1.8.0/ (Group)
|
| 200 |
+
base (object) (Dataset)
|
| 201 |
+
namespace (object) (Dataset)
|
| 202 |
+
sparse (object) (Dataset)
|
| 203 |
+
table (object) (Dataset)
|
| 204 |
+
hdmf-experimental/ (Group)
|
| 205 |
+
0.5.0/ (Group)
|
| 206 |
+
experimental (object) (Dataset)
|
| 207 |
+
namespace (object) (Dataset)
|
| 208 |
+
resources (object) (Dataset)
|
| 209 |
+
stimulus/ (Group)
|
| 210 |
+
presentation/ (Group)
|
| 211 |
+
chirp_stimulus/ (Group)
|
| 212 |
+
data (0, 0, 0) (uint8) (Dataset)
|
| 213 |
+
dimension (2,) (int64) (Dataset)
|
| 214 |
+
external_file (1,) (object) (Dataset)
|
| 215 |
+
format (object) (Dataset)
|
| 216 |
+
starting_time (float64) (Dataset)
|
| 217 |
+
movingbar_stimulus/ (Group)
|
| 218 |
+
data (0, 0, 0) (uint8) (Dataset)
|
| 219 |
+
dimension (2,) (int64) (Dataset)
|
| 220 |
+
external_file (1,) (object) (Dataset)
|
| 221 |
+
format (object) (Dataset)
|
| 222 |
+
starting_time (float64) (Dataset)
|
| 223 |
+
templates/ (Group)
|
| 224 |
+
timestamps_reference_time (object) (Dataset)
|
session_Experimenter_2_2022-07-21/experiment_1_LR/field_RGC0_structure.txt
ADDED
|
@@ -0,0 +1,224 @@
|
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|
|
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|
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|
|
|
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|
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|
|
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|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
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|
|
|
|
|
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|
|
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|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
NWB File Structure Report
|
| 2 |
+
========================
|
| 3 |
+
File: field_RGC0.nwb
|
| 4 |
+
Size: 30.39 MB
|
| 5 |
+
Generated: 2025-10-31 16:14:36
|
| 6 |
+
|
| 7 |
+
Structure:
|
| 8 |
+
----------
|
| 9 |
+
acquisition/ (Group)
|
| 10 |
+
TwoPhotonSeries_Cond_control_chirp_Pres_1/ (Group)
|
| 11 |
+
data (1462, 64, 64) (uint16) (Dataset)
|
| 12 |
+
imaging_plane/ (Group)
|
| 13 |
+
OpticalChannel/ (Group)
|
| 14 |
+
description (object) (Dataset)
|
| 15 |
+
emission_lambda (float64) (Dataset)
|
| 16 |
+
description (object) (Dataset)
|
| 17 |
+
device/ (Group)
|
| 18 |
+
excitation_lambda (float64) (Dataset)
|
| 19 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 20 |
+
imaging_rate (float64) (Dataset)
|
| 21 |
+
indicator (object) (Dataset)
|
| 22 |
+
location (object) (Dataset)
|
| 23 |
+
timestamps (1462,) (float64) (Dataset)
|
| 24 |
+
TwoPhotonSeries_Cond_control_movingbar_Pres_1/ (Group)
|
| 25 |
+
data (1691, 64, 64) (uint16) (Dataset)
|
| 26 |
+
imaging_plane/ (Group)
|
| 27 |
+
OpticalChannel/ (Group)
|
| 28 |
+
description (object) (Dataset)
|
| 29 |
+
emission_lambda (float64) (Dataset)
|
| 30 |
+
description (object) (Dataset)
|
| 31 |
+
device/ (Group)
|
| 32 |
+
excitation_lambda (float64) (Dataset)
|
| 33 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 34 |
+
imaging_rate (float64) (Dataset)
|
| 35 |
+
indicator (object) (Dataset)
|
| 36 |
+
location (object) (Dataset)
|
| 37 |
+
timestamps (1691,) (float64) (Dataset)
|
| 38 |
+
analysis/ (Group)
|
| 39 |
+
file_create_date (1,) (object) (Dataset)
|
| 40 |
+
general/ (Group)
|
| 41 |
+
devices/ (Group)
|
| 42 |
+
Microscope/ (Group)
|
| 43 |
+
experiment_metadata/ (Group)
|
| 44 |
+
experiment_number (object) (Dataset)
|
| 45 |
+
eye (object) (Dataset)
|
| 46 |
+
preparation_orientation (object) (Dataset)
|
| 47 |
+
setup_id (object) (Dataset)
|
| 48 |
+
experimenter (1,) (object) (Dataset)
|
| 49 |
+
institution (object) (Dataset)
|
| 50 |
+
lab (object) (Dataset)
|
| 51 |
+
optophysiology/ (Group)
|
| 52 |
+
ImagingPlane/ (Group)
|
| 53 |
+
OpticalChannel/ (Group)
|
| 54 |
+
description (object) (Dataset)
|
| 55 |
+
emission_lambda (float64) (Dataset)
|
| 56 |
+
description (object) (Dataset)
|
| 57 |
+
device/ (Group)
|
| 58 |
+
excitation_lambda (float64) (Dataset)
|
| 59 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 60 |
+
imaging_rate (float64) (Dataset)
|
| 61 |
+
indicator (object) (Dataset)
|
| 62 |
+
location (object) (Dataset)
|
| 63 |
+
related_publications (1,) (object) (Dataset)
|
| 64 |
+
subject/ (Group)
|
| 65 |
+
age (object) (Dataset)
|
| 66 |
+
date_of_birth (object) (Dataset)
|
| 67 |
+
genotype (object) (Dataset)
|
| 68 |
+
sex (object) (Dataset)
|
| 69 |
+
species (object) (Dataset)
|
| 70 |
+
identifier (object) (Dataset)
|
| 71 |
+
processing/ (Group)
|
| 72 |
+
Condition_control/ (Group)
|
| 73 |
+
cell_types/ (Group)
|
| 74 |
+
cluster_id (88,) (int64) (Dataset)
|
| 75 |
+
condition (88,) (object) (Dataset)
|
| 76 |
+
group_id (88,) (int64) (Dataset)
|
| 77 |
+
id (88,) (int64) (Dataset)
|
| 78 |
+
preproc_bar (88, 32) (float64) (Dataset)
|
| 79 |
+
preproc_chirp (88, 249) (float64) (Dataset)
|
| 80 |
+
prob_class (88,) (float64) (Dataset)
|
| 81 |
+
prob_cluster (88,) (float64) (Dataset)
|
| 82 |
+
prob_group (88,) (float64) (Dataset)
|
| 83 |
+
prob_supergroup (88,) (float64) (Dataset)
|
| 84 |
+
probs_per_cluster (88, 75) (float64) (Dataset)
|
| 85 |
+
roi_id (88,) (int64) (Dataset)
|
| 86 |
+
roi_table_link (88,) (int64) (Dataset)
|
| 87 |
+
supergroup (88,) (object) (Dataset)
|
| 88 |
+
chirp_60Hz_average/ (Group)
|
| 89 |
+
data (1982, 88) (float64) (Dataset)
|
| 90 |
+
timestamps (1982,) (float64) (Dataset)
|
| 91 |
+
chirp_8Hz_average/ (Group)
|
| 92 |
+
data (259, 88) (float64) (Dataset)
|
| 93 |
+
timestamps (259,) (float64) (Dataset)
|
| 94 |
+
chirp_features/ (Group)
|
| 95 |
+
chirp_on_off_index (88,) (float64) (Dataset)
|
| 96 |
+
chirp_pres_qidx (88,) (float64) (Dataset)
|
| 97 |
+
chirp_qidx (88,) (float64) (Dataset)
|
| 98 |
+
chirp_transience_index (88,) (float64) (Dataset)
|
| 99 |
+
id (88,) (int64) (Dataset)
|
| 100 |
+
roi_id (88,) (int64) (Dataset)
|
| 101 |
+
roi_table_link (88,) (int64) (Dataset)
|
| 102 |
+
chirp_preprocessed_traces/ (Group)
|
| 103 |
+
data (1462, 88) (float64) (Dataset)
|
| 104 |
+
timestamps (1462,) (float64) (Dataset)
|
| 105 |
+
chirp_snippets/ (Group)
|
| 106 |
+
data (259, 88, 5) (float64) (Dataset)
|
| 107 |
+
timestamps (259,) (float64) (Dataset)
|
| 108 |
+
chirp_snippets_t0/ (Group)
|
| 109 |
+
id (1,) (int64) (Dataset)
|
| 110 |
+
snippets_t0_array (1, 5, 88) (float64) (Dataset)
|
| 111 |
+
chirp_triggertimes_snippets/ (Group)
|
| 112 |
+
data (2, 88, 5) (float64) (Dataset)
|
| 113 |
+
starting_time (float64) (Dataset)
|
| 114 |
+
movingbar_features/ (Group)
|
| 115 |
+
bar_ds_index (88,) (float64) (Dataset)
|
| 116 |
+
bar_ds_pvalue (88,) (float64) (Dataset)
|
| 117 |
+
bar_os_index (88,) (float64) (Dataset)
|
| 118 |
+
bar_os_pvalue (88,) (float64) (Dataset)
|
| 119 |
+
bar_pref_dir (88,) (float64) (Dataset)
|
| 120 |
+
bar_pref_or (88,) (float64) (Dataset)
|
| 121 |
+
bar_pres_qidx (88,) (float64) (Dataset)
|
| 122 |
+
bar_qidx (88,) (float64) (Dataset)
|
| 123 |
+
id (88,) (int64) (Dataset)
|
| 124 |
+
roi_id (88,) (int64) (Dataset)
|
| 125 |
+
roi_table_link (88,) (int64) (Dataset)
|
| 126 |
+
movingbar_preprocessed_traces/ (Group)
|
| 127 |
+
data (1691, 88) (float64) (Dataset)
|
| 128 |
+
timestamps (1691,) (float64) (Dataset)
|
| 129 |
+
movingbar_snippets/ (Group)
|
| 130 |
+
data (33, 88, 24) (float32) (Dataset)
|
| 131 |
+
timestamps (33,) (float64) (Dataset)
|
| 132 |
+
movingbar_snippets_t0/ (Group)
|
| 133 |
+
id (1,) (int64) (Dataset)
|
| 134 |
+
snippets_t0_array (1, 24, 88) (float64) (Dataset)
|
| 135 |
+
movingbar_triggertimes_snippets/ (Group)
|
| 136 |
+
data (1, 88, 24) (float32) (Dataset)
|
| 137 |
+
starting_time (float64) (Dataset)
|
| 138 |
+
rois/ (Group)
|
| 139 |
+
ImageSegmentation/ (Group)
|
| 140 |
+
ROI masks/ (Group)
|
| 141 |
+
id (88,) (int64) (Dataset)
|
| 142 |
+
image_mask (88, 64, 64) (bool) (Dataset)
|
| 143 |
+
imaging_plane/ (Group)
|
| 144 |
+
OpticalChannel/ (Group)
|
| 145 |
+
description (object) (Dataset)
|
| 146 |
+
emission_lambda (float64) (Dataset)
|
| 147 |
+
description (object) (Dataset)
|
| 148 |
+
device/ (Group)
|
| 149 |
+
excitation_lambda (float64) (Dataset)
|
| 150 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 151 |
+
imaging_rate (float64) (Dataset)
|
| 152 |
+
indicator (object) (Dataset)
|
| 153 |
+
location (object) (Dataset)
|
| 154 |
+
nxpix (88,) (int64) (Dataset)
|
| 155 |
+
nypix (88,) (int64) (Dataset)
|
| 156 |
+
reference_images/ (Group)
|
| 157 |
+
roi_ids (88,) (int64) (Dataset)
|
| 158 |
+
roi_sizes (88,) (int64) (Dataset)
|
| 159 |
+
roi_sizes_um2 (88,) (float64) (Dataset)
|
| 160 |
+
session_info/ (Group)
|
| 161 |
+
presentation_sequence/ (Group)
|
| 162 |
+
absolute_start_time (2,) (object) (Dataset)
|
| 163 |
+
id (2,) (int64) (Dataset)
|
| 164 |
+
presentation_order (2,) (int64) (Dataset)
|
| 165 |
+
relative_start_time (2,) (float64) (Dataset)
|
| 166 |
+
stimulus_condition (2,) (object) (Dataset)
|
| 167 |
+
spatial/ (Group)
|
| 168 |
+
spatial_locations/ (Group)
|
| 169 |
+
field_temporal_nasal_pos_um (88,) (float64) (Dataset)
|
| 170 |
+
field_ventral_dorsal_pos_um (88,) (float64) (Dataset)
|
| 171 |
+
id (88,) (int64) (Dataset)
|
| 172 |
+
roi_id (88,) (int64) (Dataset)
|
| 173 |
+
roi_table_link (88,) (int64) (Dataset)
|
| 174 |
+
temporal_nasal_pos_um (88,) (float64) (Dataset)
|
| 175 |
+
ventral_dorsal_pos_um (88,) (float64) (Dataset)
|
| 176 |
+
session_description (object) (Dataset)
|
| 177 |
+
session_start_time (object) (Dataset)
|
| 178 |
+
specifications/ (Group)
|
| 179 |
+
core/ (Group)
|
| 180 |
+
2.8.0/ (Group)
|
| 181 |
+
namespace (object) (Dataset)
|
| 182 |
+
nwb.base (object) (Dataset)
|
| 183 |
+
nwb.behavior (object) (Dataset)
|
| 184 |
+
nwb.device (object) (Dataset)
|
| 185 |
+
nwb.ecephys (object) (Dataset)
|
| 186 |
+
nwb.epoch (object) (Dataset)
|
| 187 |
+
nwb.file (object) (Dataset)
|
| 188 |
+
nwb.icephys (object) (Dataset)
|
| 189 |
+
nwb.image (object) (Dataset)
|
| 190 |
+
nwb.misc (object) (Dataset)
|
| 191 |
+
nwb.ogen (object) (Dataset)
|
| 192 |
+
nwb.ophys (object) (Dataset)
|
| 193 |
+
nwb.retinotopy (object) (Dataset)
|
| 194 |
+
experiment-metadata/ (Group)
|
| 195 |
+
0.1.0/ (Group)
|
| 196 |
+
experiment_metadata.extensions (object) (Dataset)
|
| 197 |
+
namespace (object) (Dataset)
|
| 198 |
+
hdmf-common/ (Group)
|
| 199 |
+
1.8.0/ (Group)
|
| 200 |
+
base (object) (Dataset)
|
| 201 |
+
namespace (object) (Dataset)
|
| 202 |
+
sparse (object) (Dataset)
|
| 203 |
+
table (object) (Dataset)
|
| 204 |
+
hdmf-experimental/ (Group)
|
| 205 |
+
0.5.0/ (Group)
|
| 206 |
+
experimental (object) (Dataset)
|
| 207 |
+
namespace (object) (Dataset)
|
| 208 |
+
resources (object) (Dataset)
|
| 209 |
+
stimulus/ (Group)
|
| 210 |
+
presentation/ (Group)
|
| 211 |
+
chirp_stimulus/ (Group)
|
| 212 |
+
data (0, 0, 0) (uint8) (Dataset)
|
| 213 |
+
dimension (2,) (int64) (Dataset)
|
| 214 |
+
external_file (1,) (object) (Dataset)
|
| 215 |
+
format (object) (Dataset)
|
| 216 |
+
starting_time (float64) (Dataset)
|
| 217 |
+
movingbar_stimulus/ (Group)
|
| 218 |
+
data (0, 0, 0) (uint8) (Dataset)
|
| 219 |
+
dimension (2,) (int64) (Dataset)
|
| 220 |
+
external_file (1,) (object) (Dataset)
|
| 221 |
+
format (object) (Dataset)
|
| 222 |
+
starting_time (float64) (Dataset)
|
| 223 |
+
templates/ (Group)
|
| 224 |
+
timestamps_reference_time (object) (Dataset)
|
session_Experimenter_2_2022-07-21/experiment_1_LR/field_RGC1_structure.txt
ADDED
|
@@ -0,0 +1,224 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
NWB File Structure Report
|
| 2 |
+
========================
|
| 3 |
+
File: field_RGC1.nwb
|
| 4 |
+
Size: 24.22 MB
|
| 5 |
+
Generated: 2025-10-31 16:14:39
|
| 6 |
+
|
| 7 |
+
Structure:
|
| 8 |
+
----------
|
| 9 |
+
acquisition/ (Group)
|
| 10 |
+
TwoPhotonSeries_Cond_control_chirp_Pres_1/ (Group)
|
| 11 |
+
data (1513, 64, 64) (uint16) (Dataset)
|
| 12 |
+
imaging_plane/ (Group)
|
| 13 |
+
OpticalChannel/ (Group)
|
| 14 |
+
description (object) (Dataset)
|
| 15 |
+
emission_lambda (float64) (Dataset)
|
| 16 |
+
description (object) (Dataset)
|
| 17 |
+
device/ (Group)
|
| 18 |
+
excitation_lambda (float64) (Dataset)
|
| 19 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 20 |
+
imaging_rate (float64) (Dataset)
|
| 21 |
+
indicator (object) (Dataset)
|
| 22 |
+
location (object) (Dataset)
|
| 23 |
+
timestamps (1513,) (float64) (Dataset)
|
| 24 |
+
TwoPhotonSeries_Cond_control_movingbar_Pres_1/ (Group)
|
| 25 |
+
data (953, 64, 64) (uint16) (Dataset)
|
| 26 |
+
imaging_plane/ (Group)
|
| 27 |
+
OpticalChannel/ (Group)
|
| 28 |
+
description (object) (Dataset)
|
| 29 |
+
emission_lambda (float64) (Dataset)
|
| 30 |
+
description (object) (Dataset)
|
| 31 |
+
device/ (Group)
|
| 32 |
+
excitation_lambda (float64) (Dataset)
|
| 33 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 34 |
+
imaging_rate (float64) (Dataset)
|
| 35 |
+
indicator (object) (Dataset)
|
| 36 |
+
location (object) (Dataset)
|
| 37 |
+
timestamps (953,) (float64) (Dataset)
|
| 38 |
+
analysis/ (Group)
|
| 39 |
+
file_create_date (1,) (object) (Dataset)
|
| 40 |
+
general/ (Group)
|
| 41 |
+
devices/ (Group)
|
| 42 |
+
Microscope/ (Group)
|
| 43 |
+
experiment_metadata/ (Group)
|
| 44 |
+
experiment_number (object) (Dataset)
|
| 45 |
+
eye (object) (Dataset)
|
| 46 |
+
preparation_orientation (object) (Dataset)
|
| 47 |
+
setup_id (object) (Dataset)
|
| 48 |
+
experimenter (1,) (object) (Dataset)
|
| 49 |
+
institution (object) (Dataset)
|
| 50 |
+
lab (object) (Dataset)
|
| 51 |
+
optophysiology/ (Group)
|
| 52 |
+
ImagingPlane/ (Group)
|
| 53 |
+
OpticalChannel/ (Group)
|
| 54 |
+
description (object) (Dataset)
|
| 55 |
+
emission_lambda (float64) (Dataset)
|
| 56 |
+
description (object) (Dataset)
|
| 57 |
+
device/ (Group)
|
| 58 |
+
excitation_lambda (float64) (Dataset)
|
| 59 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 60 |
+
imaging_rate (float64) (Dataset)
|
| 61 |
+
indicator (object) (Dataset)
|
| 62 |
+
location (object) (Dataset)
|
| 63 |
+
related_publications (1,) (object) (Dataset)
|
| 64 |
+
subject/ (Group)
|
| 65 |
+
age (object) (Dataset)
|
| 66 |
+
date_of_birth (object) (Dataset)
|
| 67 |
+
genotype (object) (Dataset)
|
| 68 |
+
sex (object) (Dataset)
|
| 69 |
+
species (object) (Dataset)
|
| 70 |
+
identifier (object) (Dataset)
|
| 71 |
+
processing/ (Group)
|
| 72 |
+
Condition_control/ (Group)
|
| 73 |
+
cell_types/ (Group)
|
| 74 |
+
cluster_id (82,) (int64) (Dataset)
|
| 75 |
+
condition (82,) (object) (Dataset)
|
| 76 |
+
group_id (82,) (int64) (Dataset)
|
| 77 |
+
id (82,) (int64) (Dataset)
|
| 78 |
+
preproc_bar (82, 32) (float64) (Dataset)
|
| 79 |
+
preproc_chirp (82, 249) (float64) (Dataset)
|
| 80 |
+
prob_class (82,) (float64) (Dataset)
|
| 81 |
+
prob_cluster (82,) (float64) (Dataset)
|
| 82 |
+
prob_group (82,) (float64) (Dataset)
|
| 83 |
+
prob_supergroup (82,) (float64) (Dataset)
|
| 84 |
+
probs_per_cluster (82, 75) (float64) (Dataset)
|
| 85 |
+
roi_id (82,) (int64) (Dataset)
|
| 86 |
+
roi_table_link (82,) (int64) (Dataset)
|
| 87 |
+
supergroup (82,) (object) (Dataset)
|
| 88 |
+
chirp_60Hz_average/ (Group)
|
| 89 |
+
data (1982, 82) (float64) (Dataset)
|
| 90 |
+
timestamps (1982,) (float64) (Dataset)
|
| 91 |
+
chirp_8Hz_average/ (Group)
|
| 92 |
+
data (259, 82) (float64) (Dataset)
|
| 93 |
+
timestamps (259,) (float64) (Dataset)
|
| 94 |
+
chirp_features/ (Group)
|
| 95 |
+
chirp_on_off_index (82,) (float64) (Dataset)
|
| 96 |
+
chirp_pres_qidx (82,) (float64) (Dataset)
|
| 97 |
+
chirp_qidx (82,) (float64) (Dataset)
|
| 98 |
+
chirp_transience_index (82,) (float64) (Dataset)
|
| 99 |
+
id (82,) (int64) (Dataset)
|
| 100 |
+
roi_id (82,) (int64) (Dataset)
|
| 101 |
+
roi_table_link (82,) (int64) (Dataset)
|
| 102 |
+
chirp_preprocessed_traces/ (Group)
|
| 103 |
+
data (1513, 82) (float64) (Dataset)
|
| 104 |
+
timestamps (1513,) (float64) (Dataset)
|
| 105 |
+
chirp_snippets/ (Group)
|
| 106 |
+
data (259, 82, 5) (float64) (Dataset)
|
| 107 |
+
timestamps (259,) (float64) (Dataset)
|
| 108 |
+
chirp_snippets_t0/ (Group)
|
| 109 |
+
id (1,) (int64) (Dataset)
|
| 110 |
+
snippets_t0_array (1, 5, 82) (float64) (Dataset)
|
| 111 |
+
chirp_triggertimes_snippets/ (Group)
|
| 112 |
+
data (2, 82, 5) (float64) (Dataset)
|
| 113 |
+
starting_time (float64) (Dataset)
|
| 114 |
+
movingbar_features/ (Group)
|
| 115 |
+
bar_ds_index (82,) (float64) (Dataset)
|
| 116 |
+
bar_ds_pvalue (82,) (float64) (Dataset)
|
| 117 |
+
bar_os_index (82,) (float64) (Dataset)
|
| 118 |
+
bar_os_pvalue (82,) (float64) (Dataset)
|
| 119 |
+
bar_pref_dir (82,) (float64) (Dataset)
|
| 120 |
+
bar_pref_or (82,) (float64) (Dataset)
|
| 121 |
+
bar_pres_qidx (82,) (float64) (Dataset)
|
| 122 |
+
bar_qidx (82,) (float64) (Dataset)
|
| 123 |
+
id (82,) (int64) (Dataset)
|
| 124 |
+
roi_id (82,) (int64) (Dataset)
|
| 125 |
+
roi_table_link (82,) (int64) (Dataset)
|
| 126 |
+
movingbar_preprocessed_traces/ (Group)
|
| 127 |
+
data (953, 82) (float64) (Dataset)
|
| 128 |
+
timestamps (953,) (float64) (Dataset)
|
| 129 |
+
movingbar_snippets/ (Group)
|
| 130 |
+
data (33, 82, 24) (float32) (Dataset)
|
| 131 |
+
timestamps (33,) (float64) (Dataset)
|
| 132 |
+
movingbar_snippets_t0/ (Group)
|
| 133 |
+
id (1,) (int64) (Dataset)
|
| 134 |
+
snippets_t0_array (1, 24, 82) (float64) (Dataset)
|
| 135 |
+
movingbar_triggertimes_snippets/ (Group)
|
| 136 |
+
data (1, 82, 24) (float32) (Dataset)
|
| 137 |
+
starting_time (float64) (Dataset)
|
| 138 |
+
rois/ (Group)
|
| 139 |
+
ImageSegmentation/ (Group)
|
| 140 |
+
ROI masks/ (Group)
|
| 141 |
+
id (82,) (int64) (Dataset)
|
| 142 |
+
image_mask (82, 64, 64) (bool) (Dataset)
|
| 143 |
+
imaging_plane/ (Group)
|
| 144 |
+
OpticalChannel/ (Group)
|
| 145 |
+
description (object) (Dataset)
|
| 146 |
+
emission_lambda (float64) (Dataset)
|
| 147 |
+
description (object) (Dataset)
|
| 148 |
+
device/ (Group)
|
| 149 |
+
excitation_lambda (float64) (Dataset)
|
| 150 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 151 |
+
imaging_rate (float64) (Dataset)
|
| 152 |
+
indicator (object) (Dataset)
|
| 153 |
+
location (object) (Dataset)
|
| 154 |
+
nxpix (82,) (int64) (Dataset)
|
| 155 |
+
nypix (82,) (int64) (Dataset)
|
| 156 |
+
reference_images/ (Group)
|
| 157 |
+
roi_ids (82,) (int64) (Dataset)
|
| 158 |
+
roi_sizes (82,) (int64) (Dataset)
|
| 159 |
+
roi_sizes_um2 (82,) (float64) (Dataset)
|
| 160 |
+
session_info/ (Group)
|
| 161 |
+
presentation_sequence/ (Group)
|
| 162 |
+
absolute_start_time (2,) (object) (Dataset)
|
| 163 |
+
id (2,) (int64) (Dataset)
|
| 164 |
+
presentation_order (2,) (int64) (Dataset)
|
| 165 |
+
relative_start_time (2,) (float64) (Dataset)
|
| 166 |
+
stimulus_condition (2,) (object) (Dataset)
|
| 167 |
+
spatial/ (Group)
|
| 168 |
+
spatial_locations/ (Group)
|
| 169 |
+
field_temporal_nasal_pos_um (82,) (float64) (Dataset)
|
| 170 |
+
field_ventral_dorsal_pos_um (82,) (float64) (Dataset)
|
| 171 |
+
id (82,) (int64) (Dataset)
|
| 172 |
+
roi_id (82,) (int64) (Dataset)
|
| 173 |
+
roi_table_link (82,) (int64) (Dataset)
|
| 174 |
+
temporal_nasal_pos_um (82,) (float64) (Dataset)
|
| 175 |
+
ventral_dorsal_pos_um (82,) (float64) (Dataset)
|
| 176 |
+
session_description (object) (Dataset)
|
| 177 |
+
session_start_time (object) (Dataset)
|
| 178 |
+
specifications/ (Group)
|
| 179 |
+
core/ (Group)
|
| 180 |
+
2.8.0/ (Group)
|
| 181 |
+
namespace (object) (Dataset)
|
| 182 |
+
nwb.base (object) (Dataset)
|
| 183 |
+
nwb.behavior (object) (Dataset)
|
| 184 |
+
nwb.device (object) (Dataset)
|
| 185 |
+
nwb.ecephys (object) (Dataset)
|
| 186 |
+
nwb.epoch (object) (Dataset)
|
| 187 |
+
nwb.file (object) (Dataset)
|
| 188 |
+
nwb.icephys (object) (Dataset)
|
| 189 |
+
nwb.image (object) (Dataset)
|
| 190 |
+
nwb.misc (object) (Dataset)
|
| 191 |
+
nwb.ogen (object) (Dataset)
|
| 192 |
+
nwb.ophys (object) (Dataset)
|
| 193 |
+
nwb.retinotopy (object) (Dataset)
|
| 194 |
+
experiment-metadata/ (Group)
|
| 195 |
+
0.1.0/ (Group)
|
| 196 |
+
experiment_metadata.extensions (object) (Dataset)
|
| 197 |
+
namespace (object) (Dataset)
|
| 198 |
+
hdmf-common/ (Group)
|
| 199 |
+
1.8.0/ (Group)
|
| 200 |
+
base (object) (Dataset)
|
| 201 |
+
namespace (object) (Dataset)
|
| 202 |
+
sparse (object) (Dataset)
|
| 203 |
+
table (object) (Dataset)
|
| 204 |
+
hdmf-experimental/ (Group)
|
| 205 |
+
0.5.0/ (Group)
|
| 206 |
+
experimental (object) (Dataset)
|
| 207 |
+
namespace (object) (Dataset)
|
| 208 |
+
resources (object) (Dataset)
|
| 209 |
+
stimulus/ (Group)
|
| 210 |
+
presentation/ (Group)
|
| 211 |
+
chirp_stimulus/ (Group)
|
| 212 |
+
data (0, 0, 0) (uint8) (Dataset)
|
| 213 |
+
dimension (2,) (int64) (Dataset)
|
| 214 |
+
external_file (1,) (object) (Dataset)
|
| 215 |
+
format (object) (Dataset)
|
| 216 |
+
starting_time (float64) (Dataset)
|
| 217 |
+
movingbar_stimulus/ (Group)
|
| 218 |
+
data (0, 0, 0) (uint8) (Dataset)
|
| 219 |
+
dimension (2,) (int64) (Dataset)
|
| 220 |
+
external_file (1,) (object) (Dataset)
|
| 221 |
+
format (object) (Dataset)
|
| 222 |
+
starting_time (float64) (Dataset)
|
| 223 |
+
templates/ (Group)
|
| 224 |
+
timestamps_reference_time (object) (Dataset)
|
session_Experimenter_2_2022-08-17/experiment_1_LR/field_RGC0_structure.txt
ADDED
|
@@ -0,0 +1,224 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
NWB File Structure Report
|
| 2 |
+
========================
|
| 3 |
+
File: field_RGC0.nwb
|
| 4 |
+
Size: 27.99 MB
|
| 5 |
+
Generated: 2025-10-31 16:15:40
|
| 6 |
+
|
| 7 |
+
Structure:
|
| 8 |
+
----------
|
| 9 |
+
acquisition/ (Group)
|
| 10 |
+
TwoPhotonSeries_Cond_control_chirp_Pres_1/ (Group)
|
| 11 |
+
data (1662, 64, 64) (uint16) (Dataset)
|
| 12 |
+
imaging_plane/ (Group)
|
| 13 |
+
OpticalChannel/ (Group)
|
| 14 |
+
description (object) (Dataset)
|
| 15 |
+
emission_lambda (float64) (Dataset)
|
| 16 |
+
description (object) (Dataset)
|
| 17 |
+
device/ (Group)
|
| 18 |
+
excitation_lambda (float64) (Dataset)
|
| 19 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 20 |
+
imaging_rate (float64) (Dataset)
|
| 21 |
+
indicator (object) (Dataset)
|
| 22 |
+
location (object) (Dataset)
|
| 23 |
+
timestamps (1662,) (float64) (Dataset)
|
| 24 |
+
TwoPhotonSeries_Cond_control_movingbar_Pres_1/ (Group)
|
| 25 |
+
data (1154, 64, 64) (uint16) (Dataset)
|
| 26 |
+
imaging_plane/ (Group)
|
| 27 |
+
OpticalChannel/ (Group)
|
| 28 |
+
description (object) (Dataset)
|
| 29 |
+
emission_lambda (float64) (Dataset)
|
| 30 |
+
description (object) (Dataset)
|
| 31 |
+
device/ (Group)
|
| 32 |
+
excitation_lambda (float64) (Dataset)
|
| 33 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 34 |
+
imaging_rate (float64) (Dataset)
|
| 35 |
+
indicator (object) (Dataset)
|
| 36 |
+
location (object) (Dataset)
|
| 37 |
+
timestamps (1154,) (float64) (Dataset)
|
| 38 |
+
analysis/ (Group)
|
| 39 |
+
file_create_date (1,) (object) (Dataset)
|
| 40 |
+
general/ (Group)
|
| 41 |
+
devices/ (Group)
|
| 42 |
+
Microscope/ (Group)
|
| 43 |
+
experiment_metadata/ (Group)
|
| 44 |
+
experiment_number (object) (Dataset)
|
| 45 |
+
eye (object) (Dataset)
|
| 46 |
+
preparation_orientation (object) (Dataset)
|
| 47 |
+
setup_id (object) (Dataset)
|
| 48 |
+
experimenter (1,) (object) (Dataset)
|
| 49 |
+
institution (object) (Dataset)
|
| 50 |
+
lab (object) (Dataset)
|
| 51 |
+
optophysiology/ (Group)
|
| 52 |
+
ImagingPlane/ (Group)
|
| 53 |
+
OpticalChannel/ (Group)
|
| 54 |
+
description (object) (Dataset)
|
| 55 |
+
emission_lambda (float64) (Dataset)
|
| 56 |
+
description (object) (Dataset)
|
| 57 |
+
device/ (Group)
|
| 58 |
+
excitation_lambda (float64) (Dataset)
|
| 59 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 60 |
+
imaging_rate (float64) (Dataset)
|
| 61 |
+
indicator (object) (Dataset)
|
| 62 |
+
location (object) (Dataset)
|
| 63 |
+
related_publications (1,) (object) (Dataset)
|
| 64 |
+
subject/ (Group)
|
| 65 |
+
age (object) (Dataset)
|
| 66 |
+
date_of_birth (object) (Dataset)
|
| 67 |
+
genotype (object) (Dataset)
|
| 68 |
+
sex (object) (Dataset)
|
| 69 |
+
species (object) (Dataset)
|
| 70 |
+
identifier (object) (Dataset)
|
| 71 |
+
processing/ (Group)
|
| 72 |
+
Condition_control/ (Group)
|
| 73 |
+
cell_types/ (Group)
|
| 74 |
+
cluster_id (96,) (int64) (Dataset)
|
| 75 |
+
condition (96,) (object) (Dataset)
|
| 76 |
+
group_id (96,) (int64) (Dataset)
|
| 77 |
+
id (96,) (int64) (Dataset)
|
| 78 |
+
preproc_bar (96, 32) (float64) (Dataset)
|
| 79 |
+
preproc_chirp (96, 249) (float64) (Dataset)
|
| 80 |
+
prob_class (96,) (float64) (Dataset)
|
| 81 |
+
prob_cluster (96,) (float64) (Dataset)
|
| 82 |
+
prob_group (96,) (float64) (Dataset)
|
| 83 |
+
prob_supergroup (96,) (float64) (Dataset)
|
| 84 |
+
probs_per_cluster (96, 75) (float64) (Dataset)
|
| 85 |
+
roi_id (96,) (int64) (Dataset)
|
| 86 |
+
roi_table_link (96,) (int64) (Dataset)
|
| 87 |
+
supergroup (96,) (object) (Dataset)
|
| 88 |
+
chirp_60Hz_average/ (Group)
|
| 89 |
+
data (1982, 96) (float64) (Dataset)
|
| 90 |
+
timestamps (1982,) (float64) (Dataset)
|
| 91 |
+
chirp_8Hz_average/ (Group)
|
| 92 |
+
data (259, 96) (float64) (Dataset)
|
| 93 |
+
timestamps (259,) (float64) (Dataset)
|
| 94 |
+
chirp_features/ (Group)
|
| 95 |
+
chirp_on_off_index (96,) (float64) (Dataset)
|
| 96 |
+
chirp_pres_qidx (96,) (float64) (Dataset)
|
| 97 |
+
chirp_qidx (96,) (float64) (Dataset)
|
| 98 |
+
chirp_transience_index (96,) (float64) (Dataset)
|
| 99 |
+
id (96,) (int64) (Dataset)
|
| 100 |
+
roi_id (96,) (int64) (Dataset)
|
| 101 |
+
roi_table_link (96,) (int64) (Dataset)
|
| 102 |
+
chirp_preprocessed_traces/ (Group)
|
| 103 |
+
data (1662, 96) (float64) (Dataset)
|
| 104 |
+
timestamps (1662,) (float64) (Dataset)
|
| 105 |
+
chirp_snippets/ (Group)
|
| 106 |
+
data (259, 96, 5) (float64) (Dataset)
|
| 107 |
+
timestamps (259,) (float64) (Dataset)
|
| 108 |
+
chirp_snippets_t0/ (Group)
|
| 109 |
+
id (1,) (int64) (Dataset)
|
| 110 |
+
snippets_t0_array (1, 5, 96) (float64) (Dataset)
|
| 111 |
+
chirp_triggertimes_snippets/ (Group)
|
| 112 |
+
data (2, 96, 5) (float64) (Dataset)
|
| 113 |
+
starting_time (float64) (Dataset)
|
| 114 |
+
movingbar_features/ (Group)
|
| 115 |
+
bar_ds_index (96,) (float64) (Dataset)
|
| 116 |
+
bar_ds_pvalue (96,) (float64) (Dataset)
|
| 117 |
+
bar_os_index (96,) (float64) (Dataset)
|
| 118 |
+
bar_os_pvalue (96,) (float64) (Dataset)
|
| 119 |
+
bar_pref_dir (96,) (float64) (Dataset)
|
| 120 |
+
bar_pref_or (96,) (float64) (Dataset)
|
| 121 |
+
bar_pres_qidx (96,) (float64) (Dataset)
|
| 122 |
+
bar_qidx (96,) (float64) (Dataset)
|
| 123 |
+
id (96,) (int64) (Dataset)
|
| 124 |
+
roi_id (96,) (int64) (Dataset)
|
| 125 |
+
roi_table_link (96,) (int64) (Dataset)
|
| 126 |
+
movingbar_preprocessed_traces/ (Group)
|
| 127 |
+
data (1154, 96) (float64) (Dataset)
|
| 128 |
+
timestamps (1154,) (float64) (Dataset)
|
| 129 |
+
movingbar_snippets/ (Group)
|
| 130 |
+
data (33, 96, 24) (float32) (Dataset)
|
| 131 |
+
timestamps (33,) (float64) (Dataset)
|
| 132 |
+
movingbar_snippets_t0/ (Group)
|
| 133 |
+
id (1,) (int64) (Dataset)
|
| 134 |
+
snippets_t0_array (1, 24, 96) (float64) (Dataset)
|
| 135 |
+
movingbar_triggertimes_snippets/ (Group)
|
| 136 |
+
data (1, 96, 24) (float32) (Dataset)
|
| 137 |
+
starting_time (float64) (Dataset)
|
| 138 |
+
rois/ (Group)
|
| 139 |
+
ImageSegmentation/ (Group)
|
| 140 |
+
ROI masks/ (Group)
|
| 141 |
+
id (96,) (int64) (Dataset)
|
| 142 |
+
image_mask (96, 64, 64) (bool) (Dataset)
|
| 143 |
+
imaging_plane/ (Group)
|
| 144 |
+
OpticalChannel/ (Group)
|
| 145 |
+
description (object) (Dataset)
|
| 146 |
+
emission_lambda (float64) (Dataset)
|
| 147 |
+
description (object) (Dataset)
|
| 148 |
+
device/ (Group)
|
| 149 |
+
excitation_lambda (float64) (Dataset)
|
| 150 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 151 |
+
imaging_rate (float64) (Dataset)
|
| 152 |
+
indicator (object) (Dataset)
|
| 153 |
+
location (object) (Dataset)
|
| 154 |
+
nxpix (96,) (int64) (Dataset)
|
| 155 |
+
nypix (96,) (int64) (Dataset)
|
| 156 |
+
reference_images/ (Group)
|
| 157 |
+
roi_ids (96,) (int64) (Dataset)
|
| 158 |
+
roi_sizes (96,) (int64) (Dataset)
|
| 159 |
+
roi_sizes_um2 (96,) (float64) (Dataset)
|
| 160 |
+
session_info/ (Group)
|
| 161 |
+
presentation_sequence/ (Group)
|
| 162 |
+
absolute_start_time (2,) (object) (Dataset)
|
| 163 |
+
id (2,) (int64) (Dataset)
|
| 164 |
+
presentation_order (2,) (int64) (Dataset)
|
| 165 |
+
relative_start_time (2,) (float64) (Dataset)
|
| 166 |
+
stimulus_condition (2,) (object) (Dataset)
|
| 167 |
+
spatial/ (Group)
|
| 168 |
+
spatial_locations/ (Group)
|
| 169 |
+
field_temporal_nasal_pos_um (96,) (float64) (Dataset)
|
| 170 |
+
field_ventral_dorsal_pos_um (96,) (float64) (Dataset)
|
| 171 |
+
id (96,) (int64) (Dataset)
|
| 172 |
+
roi_id (96,) (int64) (Dataset)
|
| 173 |
+
roi_table_link (96,) (int64) (Dataset)
|
| 174 |
+
temporal_nasal_pos_um (96,) (float64) (Dataset)
|
| 175 |
+
ventral_dorsal_pos_um (96,) (float64) (Dataset)
|
| 176 |
+
session_description (object) (Dataset)
|
| 177 |
+
session_start_time (object) (Dataset)
|
| 178 |
+
specifications/ (Group)
|
| 179 |
+
core/ (Group)
|
| 180 |
+
2.8.0/ (Group)
|
| 181 |
+
namespace (object) (Dataset)
|
| 182 |
+
nwb.base (object) (Dataset)
|
| 183 |
+
nwb.behavior (object) (Dataset)
|
| 184 |
+
nwb.device (object) (Dataset)
|
| 185 |
+
nwb.ecephys (object) (Dataset)
|
| 186 |
+
nwb.epoch (object) (Dataset)
|
| 187 |
+
nwb.file (object) (Dataset)
|
| 188 |
+
nwb.icephys (object) (Dataset)
|
| 189 |
+
nwb.image (object) (Dataset)
|
| 190 |
+
nwb.misc (object) (Dataset)
|
| 191 |
+
nwb.ogen (object) (Dataset)
|
| 192 |
+
nwb.ophys (object) (Dataset)
|
| 193 |
+
nwb.retinotopy (object) (Dataset)
|
| 194 |
+
experiment-metadata/ (Group)
|
| 195 |
+
0.1.0/ (Group)
|
| 196 |
+
experiment_metadata.extensions (object) (Dataset)
|
| 197 |
+
namespace (object) (Dataset)
|
| 198 |
+
hdmf-common/ (Group)
|
| 199 |
+
1.8.0/ (Group)
|
| 200 |
+
base (object) (Dataset)
|
| 201 |
+
namespace (object) (Dataset)
|
| 202 |
+
sparse (object) (Dataset)
|
| 203 |
+
table (object) (Dataset)
|
| 204 |
+
hdmf-experimental/ (Group)
|
| 205 |
+
0.5.0/ (Group)
|
| 206 |
+
experimental (object) (Dataset)
|
| 207 |
+
namespace (object) (Dataset)
|
| 208 |
+
resources (object) (Dataset)
|
| 209 |
+
stimulus/ (Group)
|
| 210 |
+
presentation/ (Group)
|
| 211 |
+
chirp_stimulus/ (Group)
|
| 212 |
+
data (0, 0, 0) (uint8) (Dataset)
|
| 213 |
+
dimension (2,) (int64) (Dataset)
|
| 214 |
+
external_file (1,) (object) (Dataset)
|
| 215 |
+
format (object) (Dataset)
|
| 216 |
+
starting_time (float64) (Dataset)
|
| 217 |
+
movingbar_stimulus/ (Group)
|
| 218 |
+
data (0, 0, 0) (uint8) (Dataset)
|
| 219 |
+
dimension (2,) (int64) (Dataset)
|
| 220 |
+
external_file (1,) (object) (Dataset)
|
| 221 |
+
format (object) (Dataset)
|
| 222 |
+
starting_time (float64) (Dataset)
|
| 223 |
+
templates/ (Group)
|
| 224 |
+
timestamps_reference_time (object) (Dataset)
|
session_Experimenter_2_2022-08-17/experiment_1_LR/field_RGC1_structure.txt
ADDED
|
@@ -0,0 +1,224 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
NWB File Structure Report
|
| 2 |
+
========================
|
| 3 |
+
File: field_RGC1.nwb
|
| 4 |
+
Size: 32.22 MB
|
| 5 |
+
Generated: 2025-10-31 16:15:43
|
| 6 |
+
|
| 7 |
+
Structure:
|
| 8 |
+
----------
|
| 9 |
+
acquisition/ (Group)
|
| 10 |
+
TwoPhotonSeries_Cond_control_chirp_Pres_1/ (Group)
|
| 11 |
+
data (1920, 64, 64) (uint16) (Dataset)
|
| 12 |
+
imaging_plane/ (Group)
|
| 13 |
+
OpticalChannel/ (Group)
|
| 14 |
+
description (object) (Dataset)
|
| 15 |
+
emission_lambda (float64) (Dataset)
|
| 16 |
+
description (object) (Dataset)
|
| 17 |
+
device/ (Group)
|
| 18 |
+
excitation_lambda (float64) (Dataset)
|
| 19 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 20 |
+
imaging_rate (float64) (Dataset)
|
| 21 |
+
indicator (object) (Dataset)
|
| 22 |
+
location (object) (Dataset)
|
| 23 |
+
timestamps (1920,) (float64) (Dataset)
|
| 24 |
+
TwoPhotonSeries_Cond_control_movingbar_Pres_1/ (Group)
|
| 25 |
+
data (1361, 64, 64) (uint16) (Dataset)
|
| 26 |
+
imaging_plane/ (Group)
|
| 27 |
+
OpticalChannel/ (Group)
|
| 28 |
+
description (object) (Dataset)
|
| 29 |
+
emission_lambda (float64) (Dataset)
|
| 30 |
+
description (object) (Dataset)
|
| 31 |
+
device/ (Group)
|
| 32 |
+
excitation_lambda (float64) (Dataset)
|
| 33 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 34 |
+
imaging_rate (float64) (Dataset)
|
| 35 |
+
indicator (object) (Dataset)
|
| 36 |
+
location (object) (Dataset)
|
| 37 |
+
timestamps (1361,) (float64) (Dataset)
|
| 38 |
+
analysis/ (Group)
|
| 39 |
+
file_create_date (1,) (object) (Dataset)
|
| 40 |
+
general/ (Group)
|
| 41 |
+
devices/ (Group)
|
| 42 |
+
Microscope/ (Group)
|
| 43 |
+
experiment_metadata/ (Group)
|
| 44 |
+
experiment_number (object) (Dataset)
|
| 45 |
+
eye (object) (Dataset)
|
| 46 |
+
preparation_orientation (object) (Dataset)
|
| 47 |
+
setup_id (object) (Dataset)
|
| 48 |
+
experimenter (1,) (object) (Dataset)
|
| 49 |
+
institution (object) (Dataset)
|
| 50 |
+
lab (object) (Dataset)
|
| 51 |
+
optophysiology/ (Group)
|
| 52 |
+
ImagingPlane/ (Group)
|
| 53 |
+
OpticalChannel/ (Group)
|
| 54 |
+
description (object) (Dataset)
|
| 55 |
+
emission_lambda (float64) (Dataset)
|
| 56 |
+
description (object) (Dataset)
|
| 57 |
+
device/ (Group)
|
| 58 |
+
excitation_lambda (float64) (Dataset)
|
| 59 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 60 |
+
imaging_rate (float64) (Dataset)
|
| 61 |
+
indicator (object) (Dataset)
|
| 62 |
+
location (object) (Dataset)
|
| 63 |
+
related_publications (1,) (object) (Dataset)
|
| 64 |
+
subject/ (Group)
|
| 65 |
+
age (object) (Dataset)
|
| 66 |
+
date_of_birth (object) (Dataset)
|
| 67 |
+
genotype (object) (Dataset)
|
| 68 |
+
sex (object) (Dataset)
|
| 69 |
+
species (object) (Dataset)
|
| 70 |
+
identifier (object) (Dataset)
|
| 71 |
+
processing/ (Group)
|
| 72 |
+
Condition_control/ (Group)
|
| 73 |
+
cell_types/ (Group)
|
| 74 |
+
cluster_id (100,) (int64) (Dataset)
|
| 75 |
+
condition (100,) (object) (Dataset)
|
| 76 |
+
group_id (100,) (int64) (Dataset)
|
| 77 |
+
id (100,) (int64) (Dataset)
|
| 78 |
+
preproc_bar (100, 32) (float64) (Dataset)
|
| 79 |
+
preproc_chirp (100, 249) (float64) (Dataset)
|
| 80 |
+
prob_class (100,) (float64) (Dataset)
|
| 81 |
+
prob_cluster (100,) (float64) (Dataset)
|
| 82 |
+
prob_group (100,) (float64) (Dataset)
|
| 83 |
+
prob_supergroup (100,) (float64) (Dataset)
|
| 84 |
+
probs_per_cluster (100, 75) (float64) (Dataset)
|
| 85 |
+
roi_id (100,) (int64) (Dataset)
|
| 86 |
+
roi_table_link (100,) (int64) (Dataset)
|
| 87 |
+
supergroup (100,) (object) (Dataset)
|
| 88 |
+
chirp_60Hz_average/ (Group)
|
| 89 |
+
data (1982, 100) (float64) (Dataset)
|
| 90 |
+
timestamps (1982,) (float64) (Dataset)
|
| 91 |
+
chirp_8Hz_average/ (Group)
|
| 92 |
+
data (259, 100) (float64) (Dataset)
|
| 93 |
+
timestamps (259,) (float64) (Dataset)
|
| 94 |
+
chirp_features/ (Group)
|
| 95 |
+
chirp_on_off_index (100,) (float64) (Dataset)
|
| 96 |
+
chirp_pres_qidx (100,) (float64) (Dataset)
|
| 97 |
+
chirp_qidx (100,) (float64) (Dataset)
|
| 98 |
+
chirp_transience_index (100,) (float64) (Dataset)
|
| 99 |
+
id (100,) (int64) (Dataset)
|
| 100 |
+
roi_id (100,) (int64) (Dataset)
|
| 101 |
+
roi_table_link (100,) (int64) (Dataset)
|
| 102 |
+
chirp_preprocessed_traces/ (Group)
|
| 103 |
+
data (1920, 100) (float64) (Dataset)
|
| 104 |
+
timestamps (1920,) (float64) (Dataset)
|
| 105 |
+
chirp_snippets/ (Group)
|
| 106 |
+
data (259, 100, 5) (float64) (Dataset)
|
| 107 |
+
timestamps (259,) (float64) (Dataset)
|
| 108 |
+
chirp_snippets_t0/ (Group)
|
| 109 |
+
id (1,) (int64) (Dataset)
|
| 110 |
+
snippets_t0_array (1, 5, 100) (float64) (Dataset)
|
| 111 |
+
chirp_triggertimes_snippets/ (Group)
|
| 112 |
+
data (2, 100, 5) (float64) (Dataset)
|
| 113 |
+
starting_time (float64) (Dataset)
|
| 114 |
+
movingbar_features/ (Group)
|
| 115 |
+
bar_ds_index (100,) (float64) (Dataset)
|
| 116 |
+
bar_ds_pvalue (100,) (float64) (Dataset)
|
| 117 |
+
bar_os_index (100,) (float64) (Dataset)
|
| 118 |
+
bar_os_pvalue (100,) (float64) (Dataset)
|
| 119 |
+
bar_pref_dir (100,) (float64) (Dataset)
|
| 120 |
+
bar_pref_or (100,) (float64) (Dataset)
|
| 121 |
+
bar_pres_qidx (100,) (float64) (Dataset)
|
| 122 |
+
bar_qidx (100,) (float64) (Dataset)
|
| 123 |
+
id (100,) (int64) (Dataset)
|
| 124 |
+
roi_id (100,) (int64) (Dataset)
|
| 125 |
+
roi_table_link (100,) (int64) (Dataset)
|
| 126 |
+
movingbar_preprocessed_traces/ (Group)
|
| 127 |
+
data (1361, 100) (float64) (Dataset)
|
| 128 |
+
timestamps (1361,) (float64) (Dataset)
|
| 129 |
+
movingbar_snippets/ (Group)
|
| 130 |
+
data (33, 100, 24) (float32) (Dataset)
|
| 131 |
+
timestamps (33,) (float64) (Dataset)
|
| 132 |
+
movingbar_snippets_t0/ (Group)
|
| 133 |
+
id (1,) (int64) (Dataset)
|
| 134 |
+
snippets_t0_array (1, 24, 100) (float64) (Dataset)
|
| 135 |
+
movingbar_triggertimes_snippets/ (Group)
|
| 136 |
+
data (1, 100, 24) (float32) (Dataset)
|
| 137 |
+
starting_time (float64) (Dataset)
|
| 138 |
+
rois/ (Group)
|
| 139 |
+
ImageSegmentation/ (Group)
|
| 140 |
+
ROI masks/ (Group)
|
| 141 |
+
id (100,) (int64) (Dataset)
|
| 142 |
+
image_mask (100, 64, 64) (bool) (Dataset)
|
| 143 |
+
imaging_plane/ (Group)
|
| 144 |
+
OpticalChannel/ (Group)
|
| 145 |
+
description (object) (Dataset)
|
| 146 |
+
emission_lambda (float64) (Dataset)
|
| 147 |
+
description (object) (Dataset)
|
| 148 |
+
device/ (Group)
|
| 149 |
+
excitation_lambda (float64) (Dataset)
|
| 150 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 151 |
+
imaging_rate (float64) (Dataset)
|
| 152 |
+
indicator (object) (Dataset)
|
| 153 |
+
location (object) (Dataset)
|
| 154 |
+
nxpix (100,) (int64) (Dataset)
|
| 155 |
+
nypix (100,) (int64) (Dataset)
|
| 156 |
+
reference_images/ (Group)
|
| 157 |
+
roi_ids (100,) (int64) (Dataset)
|
| 158 |
+
roi_sizes (100,) (int64) (Dataset)
|
| 159 |
+
roi_sizes_um2 (100,) (float64) (Dataset)
|
| 160 |
+
session_info/ (Group)
|
| 161 |
+
presentation_sequence/ (Group)
|
| 162 |
+
absolute_start_time (2,) (object) (Dataset)
|
| 163 |
+
id (2,) (int64) (Dataset)
|
| 164 |
+
presentation_order (2,) (int64) (Dataset)
|
| 165 |
+
relative_start_time (2,) (float64) (Dataset)
|
| 166 |
+
stimulus_condition (2,) (object) (Dataset)
|
| 167 |
+
spatial/ (Group)
|
| 168 |
+
spatial_locations/ (Group)
|
| 169 |
+
field_temporal_nasal_pos_um (100,) (float64) (Dataset)
|
| 170 |
+
field_ventral_dorsal_pos_um (100,) (float64) (Dataset)
|
| 171 |
+
id (100,) (int64) (Dataset)
|
| 172 |
+
roi_id (100,) (int64) (Dataset)
|
| 173 |
+
roi_table_link (100,) (int64) (Dataset)
|
| 174 |
+
temporal_nasal_pos_um (100,) (float64) (Dataset)
|
| 175 |
+
ventral_dorsal_pos_um (100,) (float64) (Dataset)
|
| 176 |
+
session_description (object) (Dataset)
|
| 177 |
+
session_start_time (object) (Dataset)
|
| 178 |
+
specifications/ (Group)
|
| 179 |
+
core/ (Group)
|
| 180 |
+
2.8.0/ (Group)
|
| 181 |
+
namespace (object) (Dataset)
|
| 182 |
+
nwb.base (object) (Dataset)
|
| 183 |
+
nwb.behavior (object) (Dataset)
|
| 184 |
+
nwb.device (object) (Dataset)
|
| 185 |
+
nwb.ecephys (object) (Dataset)
|
| 186 |
+
nwb.epoch (object) (Dataset)
|
| 187 |
+
nwb.file (object) (Dataset)
|
| 188 |
+
nwb.icephys (object) (Dataset)
|
| 189 |
+
nwb.image (object) (Dataset)
|
| 190 |
+
nwb.misc (object) (Dataset)
|
| 191 |
+
nwb.ogen (object) (Dataset)
|
| 192 |
+
nwb.ophys (object) (Dataset)
|
| 193 |
+
nwb.retinotopy (object) (Dataset)
|
| 194 |
+
experiment-metadata/ (Group)
|
| 195 |
+
0.1.0/ (Group)
|
| 196 |
+
experiment_metadata.extensions (object) (Dataset)
|
| 197 |
+
namespace (object) (Dataset)
|
| 198 |
+
hdmf-common/ (Group)
|
| 199 |
+
1.8.0/ (Group)
|
| 200 |
+
base (object) (Dataset)
|
| 201 |
+
namespace (object) (Dataset)
|
| 202 |
+
sparse (object) (Dataset)
|
| 203 |
+
table (object) (Dataset)
|
| 204 |
+
hdmf-experimental/ (Group)
|
| 205 |
+
0.5.0/ (Group)
|
| 206 |
+
experimental (object) (Dataset)
|
| 207 |
+
namespace (object) (Dataset)
|
| 208 |
+
resources (object) (Dataset)
|
| 209 |
+
stimulus/ (Group)
|
| 210 |
+
presentation/ (Group)
|
| 211 |
+
chirp_stimulus/ (Group)
|
| 212 |
+
data (0, 0, 0) (uint8) (Dataset)
|
| 213 |
+
dimension (2,) (int64) (Dataset)
|
| 214 |
+
external_file (1,) (object) (Dataset)
|
| 215 |
+
format (object) (Dataset)
|
| 216 |
+
starting_time (float64) (Dataset)
|
| 217 |
+
movingbar_stimulus/ (Group)
|
| 218 |
+
data (0, 0, 0) (uint8) (Dataset)
|
| 219 |
+
dimension (2,) (int64) (Dataset)
|
| 220 |
+
external_file (1,) (object) (Dataset)
|
| 221 |
+
format (object) (Dataset)
|
| 222 |
+
starting_time (float64) (Dataset)
|
| 223 |
+
templates/ (Group)
|
| 224 |
+
timestamps_reference_time (object) (Dataset)
|
session_Experimenter_2_2022-08-17/experiment_1_LR/field_RGC2_structure.txt
ADDED
|
@@ -0,0 +1,224 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
NWB File Structure Report
|
| 2 |
+
========================
|
| 3 |
+
File: field_RGC2.nwb
|
| 4 |
+
Size: 26.67 MB
|
| 5 |
+
Generated: 2025-10-31 16:15:45
|
| 6 |
+
|
| 7 |
+
Structure:
|
| 8 |
+
----------
|
| 9 |
+
acquisition/ (Group)
|
| 10 |
+
TwoPhotonSeries_Cond_control_chirp_Pres_1/ (Group)
|
| 11 |
+
data (1552, 64, 64) (uint16) (Dataset)
|
| 12 |
+
imaging_plane/ (Group)
|
| 13 |
+
OpticalChannel/ (Group)
|
| 14 |
+
description (object) (Dataset)
|
| 15 |
+
emission_lambda (float64) (Dataset)
|
| 16 |
+
description (object) (Dataset)
|
| 17 |
+
device/ (Group)
|
| 18 |
+
excitation_lambda (float64) (Dataset)
|
| 19 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 20 |
+
imaging_rate (float64) (Dataset)
|
| 21 |
+
indicator (object) (Dataset)
|
| 22 |
+
location (object) (Dataset)
|
| 23 |
+
timestamps (1552,) (float64) (Dataset)
|
| 24 |
+
TwoPhotonSeries_Cond_control_movingbar_Pres_1/ (Group)
|
| 25 |
+
data (1103, 64, 64) (uint16) (Dataset)
|
| 26 |
+
imaging_plane/ (Group)
|
| 27 |
+
OpticalChannel/ (Group)
|
| 28 |
+
description (object) (Dataset)
|
| 29 |
+
emission_lambda (float64) (Dataset)
|
| 30 |
+
description (object) (Dataset)
|
| 31 |
+
device/ (Group)
|
| 32 |
+
excitation_lambda (float64) (Dataset)
|
| 33 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 34 |
+
imaging_rate (float64) (Dataset)
|
| 35 |
+
indicator (object) (Dataset)
|
| 36 |
+
location (object) (Dataset)
|
| 37 |
+
timestamps (1103,) (float64) (Dataset)
|
| 38 |
+
analysis/ (Group)
|
| 39 |
+
file_create_date (1,) (object) (Dataset)
|
| 40 |
+
general/ (Group)
|
| 41 |
+
devices/ (Group)
|
| 42 |
+
Microscope/ (Group)
|
| 43 |
+
experiment_metadata/ (Group)
|
| 44 |
+
experiment_number (object) (Dataset)
|
| 45 |
+
eye (object) (Dataset)
|
| 46 |
+
preparation_orientation (object) (Dataset)
|
| 47 |
+
setup_id (object) (Dataset)
|
| 48 |
+
experimenter (1,) (object) (Dataset)
|
| 49 |
+
institution (object) (Dataset)
|
| 50 |
+
lab (object) (Dataset)
|
| 51 |
+
optophysiology/ (Group)
|
| 52 |
+
ImagingPlane/ (Group)
|
| 53 |
+
OpticalChannel/ (Group)
|
| 54 |
+
description (object) (Dataset)
|
| 55 |
+
emission_lambda (float64) (Dataset)
|
| 56 |
+
description (object) (Dataset)
|
| 57 |
+
device/ (Group)
|
| 58 |
+
excitation_lambda (float64) (Dataset)
|
| 59 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 60 |
+
imaging_rate (float64) (Dataset)
|
| 61 |
+
indicator (object) (Dataset)
|
| 62 |
+
location (object) (Dataset)
|
| 63 |
+
related_publications (1,) (object) (Dataset)
|
| 64 |
+
subject/ (Group)
|
| 65 |
+
age (object) (Dataset)
|
| 66 |
+
date_of_birth (object) (Dataset)
|
| 67 |
+
genotype (object) (Dataset)
|
| 68 |
+
sex (object) (Dataset)
|
| 69 |
+
species (object) (Dataset)
|
| 70 |
+
identifier (object) (Dataset)
|
| 71 |
+
processing/ (Group)
|
| 72 |
+
Condition_control/ (Group)
|
| 73 |
+
cell_types/ (Group)
|
| 74 |
+
cluster_id (97,) (int64) (Dataset)
|
| 75 |
+
condition (97,) (object) (Dataset)
|
| 76 |
+
group_id (97,) (int64) (Dataset)
|
| 77 |
+
id (97,) (int64) (Dataset)
|
| 78 |
+
preproc_bar (97, 32) (float64) (Dataset)
|
| 79 |
+
preproc_chirp (97, 249) (float64) (Dataset)
|
| 80 |
+
prob_class (97,) (float64) (Dataset)
|
| 81 |
+
prob_cluster (97,) (float64) (Dataset)
|
| 82 |
+
prob_group (97,) (float64) (Dataset)
|
| 83 |
+
prob_supergroup (97,) (float64) (Dataset)
|
| 84 |
+
probs_per_cluster (97, 75) (float64) (Dataset)
|
| 85 |
+
roi_id (97,) (int64) (Dataset)
|
| 86 |
+
roi_table_link (97,) (int64) (Dataset)
|
| 87 |
+
supergroup (97,) (object) (Dataset)
|
| 88 |
+
chirp_60Hz_average/ (Group)
|
| 89 |
+
data (1982, 97) (float64) (Dataset)
|
| 90 |
+
timestamps (1982,) (float64) (Dataset)
|
| 91 |
+
chirp_8Hz_average/ (Group)
|
| 92 |
+
data (259, 97) (float64) (Dataset)
|
| 93 |
+
timestamps (259,) (float64) (Dataset)
|
| 94 |
+
chirp_features/ (Group)
|
| 95 |
+
chirp_on_off_index (97,) (float64) (Dataset)
|
| 96 |
+
chirp_pres_qidx (97,) (float64) (Dataset)
|
| 97 |
+
chirp_qidx (97,) (float64) (Dataset)
|
| 98 |
+
chirp_transience_index (97,) (float64) (Dataset)
|
| 99 |
+
id (97,) (int64) (Dataset)
|
| 100 |
+
roi_id (97,) (int64) (Dataset)
|
| 101 |
+
roi_table_link (97,) (int64) (Dataset)
|
| 102 |
+
chirp_preprocessed_traces/ (Group)
|
| 103 |
+
data (1552, 97) (float64) (Dataset)
|
| 104 |
+
timestamps (1552,) (float64) (Dataset)
|
| 105 |
+
chirp_snippets/ (Group)
|
| 106 |
+
data (259, 97, 5) (float64) (Dataset)
|
| 107 |
+
timestamps (259,) (float64) (Dataset)
|
| 108 |
+
chirp_snippets_t0/ (Group)
|
| 109 |
+
id (1,) (int64) (Dataset)
|
| 110 |
+
snippets_t0_array (1, 5, 97) (float64) (Dataset)
|
| 111 |
+
chirp_triggertimes_snippets/ (Group)
|
| 112 |
+
data (2, 97, 5) (float64) (Dataset)
|
| 113 |
+
starting_time (float64) (Dataset)
|
| 114 |
+
movingbar_features/ (Group)
|
| 115 |
+
bar_ds_index (97,) (float64) (Dataset)
|
| 116 |
+
bar_ds_pvalue (97,) (float64) (Dataset)
|
| 117 |
+
bar_os_index (97,) (float64) (Dataset)
|
| 118 |
+
bar_os_pvalue (97,) (float64) (Dataset)
|
| 119 |
+
bar_pref_dir (97,) (float64) (Dataset)
|
| 120 |
+
bar_pref_or (97,) (float64) (Dataset)
|
| 121 |
+
bar_pres_qidx (97,) (float64) (Dataset)
|
| 122 |
+
bar_qidx (97,) (float64) (Dataset)
|
| 123 |
+
id (97,) (int64) (Dataset)
|
| 124 |
+
roi_id (97,) (int64) (Dataset)
|
| 125 |
+
roi_table_link (97,) (int64) (Dataset)
|
| 126 |
+
movingbar_preprocessed_traces/ (Group)
|
| 127 |
+
data (1103, 97) (float64) (Dataset)
|
| 128 |
+
timestamps (1103,) (float64) (Dataset)
|
| 129 |
+
movingbar_snippets/ (Group)
|
| 130 |
+
data (33, 97, 24) (float32) (Dataset)
|
| 131 |
+
timestamps (33,) (float64) (Dataset)
|
| 132 |
+
movingbar_snippets_t0/ (Group)
|
| 133 |
+
id (1,) (int64) (Dataset)
|
| 134 |
+
snippets_t0_array (1, 24, 97) (float64) (Dataset)
|
| 135 |
+
movingbar_triggertimes_snippets/ (Group)
|
| 136 |
+
data (1, 97, 24) (float32) (Dataset)
|
| 137 |
+
starting_time (float64) (Dataset)
|
| 138 |
+
rois/ (Group)
|
| 139 |
+
ImageSegmentation/ (Group)
|
| 140 |
+
ROI masks/ (Group)
|
| 141 |
+
id (97,) (int64) (Dataset)
|
| 142 |
+
image_mask (97, 64, 64) (bool) (Dataset)
|
| 143 |
+
imaging_plane/ (Group)
|
| 144 |
+
OpticalChannel/ (Group)
|
| 145 |
+
description (object) (Dataset)
|
| 146 |
+
emission_lambda (float64) (Dataset)
|
| 147 |
+
description (object) (Dataset)
|
| 148 |
+
device/ (Group)
|
| 149 |
+
excitation_lambda (float64) (Dataset)
|
| 150 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 151 |
+
imaging_rate (float64) (Dataset)
|
| 152 |
+
indicator (object) (Dataset)
|
| 153 |
+
location (object) (Dataset)
|
| 154 |
+
nxpix (97,) (int64) (Dataset)
|
| 155 |
+
nypix (97,) (int64) (Dataset)
|
| 156 |
+
reference_images/ (Group)
|
| 157 |
+
roi_ids (97,) (int64) (Dataset)
|
| 158 |
+
roi_sizes (97,) (int64) (Dataset)
|
| 159 |
+
roi_sizes_um2 (97,) (float64) (Dataset)
|
| 160 |
+
session_info/ (Group)
|
| 161 |
+
presentation_sequence/ (Group)
|
| 162 |
+
absolute_start_time (2,) (object) (Dataset)
|
| 163 |
+
id (2,) (int64) (Dataset)
|
| 164 |
+
presentation_order (2,) (int64) (Dataset)
|
| 165 |
+
relative_start_time (2,) (float64) (Dataset)
|
| 166 |
+
stimulus_condition (2,) (object) (Dataset)
|
| 167 |
+
spatial/ (Group)
|
| 168 |
+
spatial_locations/ (Group)
|
| 169 |
+
field_temporal_nasal_pos_um (97,) (float64) (Dataset)
|
| 170 |
+
field_ventral_dorsal_pos_um (97,) (float64) (Dataset)
|
| 171 |
+
id (97,) (int64) (Dataset)
|
| 172 |
+
roi_id (97,) (int64) (Dataset)
|
| 173 |
+
roi_table_link (97,) (int64) (Dataset)
|
| 174 |
+
temporal_nasal_pos_um (97,) (float64) (Dataset)
|
| 175 |
+
ventral_dorsal_pos_um (97,) (float64) (Dataset)
|
| 176 |
+
session_description (object) (Dataset)
|
| 177 |
+
session_start_time (object) (Dataset)
|
| 178 |
+
specifications/ (Group)
|
| 179 |
+
core/ (Group)
|
| 180 |
+
2.8.0/ (Group)
|
| 181 |
+
namespace (object) (Dataset)
|
| 182 |
+
nwb.base (object) (Dataset)
|
| 183 |
+
nwb.behavior (object) (Dataset)
|
| 184 |
+
nwb.device (object) (Dataset)
|
| 185 |
+
nwb.ecephys (object) (Dataset)
|
| 186 |
+
nwb.epoch (object) (Dataset)
|
| 187 |
+
nwb.file (object) (Dataset)
|
| 188 |
+
nwb.icephys (object) (Dataset)
|
| 189 |
+
nwb.image (object) (Dataset)
|
| 190 |
+
nwb.misc (object) (Dataset)
|
| 191 |
+
nwb.ogen (object) (Dataset)
|
| 192 |
+
nwb.ophys (object) (Dataset)
|
| 193 |
+
nwb.retinotopy (object) (Dataset)
|
| 194 |
+
experiment-metadata/ (Group)
|
| 195 |
+
0.1.0/ (Group)
|
| 196 |
+
experiment_metadata.extensions (object) (Dataset)
|
| 197 |
+
namespace (object) (Dataset)
|
| 198 |
+
hdmf-common/ (Group)
|
| 199 |
+
1.8.0/ (Group)
|
| 200 |
+
base (object) (Dataset)
|
| 201 |
+
namespace (object) (Dataset)
|
| 202 |
+
sparse (object) (Dataset)
|
| 203 |
+
table (object) (Dataset)
|
| 204 |
+
hdmf-experimental/ (Group)
|
| 205 |
+
0.5.0/ (Group)
|
| 206 |
+
experimental (object) (Dataset)
|
| 207 |
+
namespace (object) (Dataset)
|
| 208 |
+
resources (object) (Dataset)
|
| 209 |
+
stimulus/ (Group)
|
| 210 |
+
presentation/ (Group)
|
| 211 |
+
chirp_stimulus/ (Group)
|
| 212 |
+
data (0, 0, 0) (uint8) (Dataset)
|
| 213 |
+
dimension (2,) (int64) (Dataset)
|
| 214 |
+
external_file (1,) (object) (Dataset)
|
| 215 |
+
format (object) (Dataset)
|
| 216 |
+
starting_time (float64) (Dataset)
|
| 217 |
+
movingbar_stimulus/ (Group)
|
| 218 |
+
data (0, 0, 0) (uint8) (Dataset)
|
| 219 |
+
dimension (2,) (int64) (Dataset)
|
| 220 |
+
external_file (1,) (object) (Dataset)
|
| 221 |
+
format (object) (Dataset)
|
| 222 |
+
starting_time (float64) (Dataset)
|
| 223 |
+
templates/ (Group)
|
| 224 |
+
timestamps_reference_time (object) (Dataset)
|
session_Experimenter_2_2022-09-21/experiment_1_RR/field_RGC0_structure.txt
ADDED
|
@@ -0,0 +1,224 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
NWB File Structure Report
|
| 2 |
+
========================
|
| 3 |
+
File: field_RGC0.nwb
|
| 4 |
+
Size: 25.88 MB
|
| 5 |
+
Generated: 2025-10-31 16:15:56
|
| 6 |
+
|
| 7 |
+
Structure:
|
| 8 |
+
----------
|
| 9 |
+
acquisition/ (Group)
|
| 10 |
+
TwoPhotonSeries_Cond_control_chirp_Pres_1/ (Group)
|
| 11 |
+
data (1461, 64, 64) (uint16) (Dataset)
|
| 12 |
+
imaging_plane/ (Group)
|
| 13 |
+
OpticalChannel/ (Group)
|
| 14 |
+
description (object) (Dataset)
|
| 15 |
+
emission_lambda (float64) (Dataset)
|
| 16 |
+
description (object) (Dataset)
|
| 17 |
+
device/ (Group)
|
| 18 |
+
excitation_lambda (float64) (Dataset)
|
| 19 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 20 |
+
imaging_rate (float64) (Dataset)
|
| 21 |
+
indicator (object) (Dataset)
|
| 22 |
+
location (object) (Dataset)
|
| 23 |
+
timestamps (1461,) (float64) (Dataset)
|
| 24 |
+
TwoPhotonSeries_Cond_control_movingbar_Pres_1/ (Group)
|
| 25 |
+
data (1030, 64, 64) (uint16) (Dataset)
|
| 26 |
+
imaging_plane/ (Group)
|
| 27 |
+
OpticalChannel/ (Group)
|
| 28 |
+
description (object) (Dataset)
|
| 29 |
+
emission_lambda (float64) (Dataset)
|
| 30 |
+
description (object) (Dataset)
|
| 31 |
+
device/ (Group)
|
| 32 |
+
excitation_lambda (float64) (Dataset)
|
| 33 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 34 |
+
imaging_rate (float64) (Dataset)
|
| 35 |
+
indicator (object) (Dataset)
|
| 36 |
+
location (object) (Dataset)
|
| 37 |
+
timestamps (1030,) (float64) (Dataset)
|
| 38 |
+
analysis/ (Group)
|
| 39 |
+
file_create_date (1,) (object) (Dataset)
|
| 40 |
+
general/ (Group)
|
| 41 |
+
devices/ (Group)
|
| 42 |
+
Microscope/ (Group)
|
| 43 |
+
experiment_metadata/ (Group)
|
| 44 |
+
experiment_number (object) (Dataset)
|
| 45 |
+
eye (object) (Dataset)
|
| 46 |
+
preparation_orientation (object) (Dataset)
|
| 47 |
+
setup_id (object) (Dataset)
|
| 48 |
+
experimenter (1,) (object) (Dataset)
|
| 49 |
+
institution (object) (Dataset)
|
| 50 |
+
lab (object) (Dataset)
|
| 51 |
+
optophysiology/ (Group)
|
| 52 |
+
ImagingPlane/ (Group)
|
| 53 |
+
OpticalChannel/ (Group)
|
| 54 |
+
description (object) (Dataset)
|
| 55 |
+
emission_lambda (float64) (Dataset)
|
| 56 |
+
description (object) (Dataset)
|
| 57 |
+
device/ (Group)
|
| 58 |
+
excitation_lambda (float64) (Dataset)
|
| 59 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 60 |
+
imaging_rate (float64) (Dataset)
|
| 61 |
+
indicator (object) (Dataset)
|
| 62 |
+
location (object) (Dataset)
|
| 63 |
+
related_publications (1,) (object) (Dataset)
|
| 64 |
+
subject/ (Group)
|
| 65 |
+
age (object) (Dataset)
|
| 66 |
+
date_of_birth (object) (Dataset)
|
| 67 |
+
genotype (object) (Dataset)
|
| 68 |
+
sex (object) (Dataset)
|
| 69 |
+
species (object) (Dataset)
|
| 70 |
+
identifier (object) (Dataset)
|
| 71 |
+
processing/ (Group)
|
| 72 |
+
Condition_control/ (Group)
|
| 73 |
+
cell_types/ (Group)
|
| 74 |
+
cluster_id (108,) (int64) (Dataset)
|
| 75 |
+
condition (108,) (object) (Dataset)
|
| 76 |
+
group_id (108,) (int64) (Dataset)
|
| 77 |
+
id (108,) (int64) (Dataset)
|
| 78 |
+
preproc_bar (108, 32) (float64) (Dataset)
|
| 79 |
+
preproc_chirp (108, 249) (float64) (Dataset)
|
| 80 |
+
prob_class (108,) (float64) (Dataset)
|
| 81 |
+
prob_cluster (108,) (float64) (Dataset)
|
| 82 |
+
prob_group (108,) (float64) (Dataset)
|
| 83 |
+
prob_supergroup (108,) (float64) (Dataset)
|
| 84 |
+
probs_per_cluster (108, 75) (float64) (Dataset)
|
| 85 |
+
roi_id (108,) (int64) (Dataset)
|
| 86 |
+
roi_table_link (108,) (int64) (Dataset)
|
| 87 |
+
supergroup (108,) (object) (Dataset)
|
| 88 |
+
chirp_60Hz_average/ (Group)
|
| 89 |
+
data (1982, 108) (float64) (Dataset)
|
| 90 |
+
timestamps (1982,) (float64) (Dataset)
|
| 91 |
+
chirp_8Hz_average/ (Group)
|
| 92 |
+
data (259, 108) (float64) (Dataset)
|
| 93 |
+
timestamps (259,) (float64) (Dataset)
|
| 94 |
+
chirp_features/ (Group)
|
| 95 |
+
chirp_on_off_index (108,) (float64) (Dataset)
|
| 96 |
+
chirp_pres_qidx (108,) (float64) (Dataset)
|
| 97 |
+
chirp_qidx (108,) (float64) (Dataset)
|
| 98 |
+
chirp_transience_index (108,) (float64) (Dataset)
|
| 99 |
+
id (108,) (int64) (Dataset)
|
| 100 |
+
roi_id (108,) (int64) (Dataset)
|
| 101 |
+
roi_table_link (108,) (int64) (Dataset)
|
| 102 |
+
chirp_preprocessed_traces/ (Group)
|
| 103 |
+
data (1461, 108) (float64) (Dataset)
|
| 104 |
+
timestamps (1461,) (float64) (Dataset)
|
| 105 |
+
chirp_snippets/ (Group)
|
| 106 |
+
data (259, 108, 5) (float64) (Dataset)
|
| 107 |
+
timestamps (259,) (float64) (Dataset)
|
| 108 |
+
chirp_snippets_t0/ (Group)
|
| 109 |
+
id (1,) (int64) (Dataset)
|
| 110 |
+
snippets_t0_array (1, 5, 108) (float64) (Dataset)
|
| 111 |
+
chirp_triggertimes_snippets/ (Group)
|
| 112 |
+
data (2, 108, 5) (float64) (Dataset)
|
| 113 |
+
starting_time (float64) (Dataset)
|
| 114 |
+
movingbar_features/ (Group)
|
| 115 |
+
bar_ds_index (108,) (float64) (Dataset)
|
| 116 |
+
bar_ds_pvalue (108,) (float64) (Dataset)
|
| 117 |
+
bar_os_index (108,) (float64) (Dataset)
|
| 118 |
+
bar_os_pvalue (108,) (float64) (Dataset)
|
| 119 |
+
bar_pref_dir (108,) (float64) (Dataset)
|
| 120 |
+
bar_pref_or (108,) (float64) (Dataset)
|
| 121 |
+
bar_pres_qidx (108,) (float64) (Dataset)
|
| 122 |
+
bar_qidx (108,) (float64) (Dataset)
|
| 123 |
+
id (108,) (int64) (Dataset)
|
| 124 |
+
roi_id (108,) (int64) (Dataset)
|
| 125 |
+
roi_table_link (108,) (int64) (Dataset)
|
| 126 |
+
movingbar_preprocessed_traces/ (Group)
|
| 127 |
+
data (1030, 108) (float64) (Dataset)
|
| 128 |
+
timestamps (1030,) (float64) (Dataset)
|
| 129 |
+
movingbar_snippets/ (Group)
|
| 130 |
+
data (33, 108, 24) (float32) (Dataset)
|
| 131 |
+
timestamps (33,) (float64) (Dataset)
|
| 132 |
+
movingbar_snippets_t0/ (Group)
|
| 133 |
+
id (1,) (int64) (Dataset)
|
| 134 |
+
snippets_t0_array (1, 24, 108) (float64) (Dataset)
|
| 135 |
+
movingbar_triggertimes_snippets/ (Group)
|
| 136 |
+
data (1, 108, 24) (float32) (Dataset)
|
| 137 |
+
starting_time (float64) (Dataset)
|
| 138 |
+
rois/ (Group)
|
| 139 |
+
ImageSegmentation/ (Group)
|
| 140 |
+
ROI masks/ (Group)
|
| 141 |
+
id (108,) (int64) (Dataset)
|
| 142 |
+
image_mask (108, 64, 64) (bool) (Dataset)
|
| 143 |
+
imaging_plane/ (Group)
|
| 144 |
+
OpticalChannel/ (Group)
|
| 145 |
+
description (object) (Dataset)
|
| 146 |
+
emission_lambda (float64) (Dataset)
|
| 147 |
+
description (object) (Dataset)
|
| 148 |
+
device/ (Group)
|
| 149 |
+
excitation_lambda (float64) (Dataset)
|
| 150 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 151 |
+
imaging_rate (float64) (Dataset)
|
| 152 |
+
indicator (object) (Dataset)
|
| 153 |
+
location (object) (Dataset)
|
| 154 |
+
nxpix (108,) (int64) (Dataset)
|
| 155 |
+
nypix (108,) (int64) (Dataset)
|
| 156 |
+
reference_images/ (Group)
|
| 157 |
+
roi_ids (108,) (int64) (Dataset)
|
| 158 |
+
roi_sizes (108,) (int64) (Dataset)
|
| 159 |
+
roi_sizes_um2 (108,) (float64) (Dataset)
|
| 160 |
+
session_info/ (Group)
|
| 161 |
+
presentation_sequence/ (Group)
|
| 162 |
+
absolute_start_time (2,) (object) (Dataset)
|
| 163 |
+
id (2,) (int64) (Dataset)
|
| 164 |
+
presentation_order (2,) (int64) (Dataset)
|
| 165 |
+
relative_start_time (2,) (float64) (Dataset)
|
| 166 |
+
stimulus_condition (2,) (object) (Dataset)
|
| 167 |
+
spatial/ (Group)
|
| 168 |
+
spatial_locations/ (Group)
|
| 169 |
+
field_temporal_nasal_pos_um (108,) (float64) (Dataset)
|
| 170 |
+
field_ventral_dorsal_pos_um (108,) (float64) (Dataset)
|
| 171 |
+
id (108,) (int64) (Dataset)
|
| 172 |
+
roi_id (108,) (int64) (Dataset)
|
| 173 |
+
roi_table_link (108,) (int64) (Dataset)
|
| 174 |
+
temporal_nasal_pos_um (108,) (float64) (Dataset)
|
| 175 |
+
ventral_dorsal_pos_um (108,) (float64) (Dataset)
|
| 176 |
+
session_description (object) (Dataset)
|
| 177 |
+
session_start_time (object) (Dataset)
|
| 178 |
+
specifications/ (Group)
|
| 179 |
+
core/ (Group)
|
| 180 |
+
2.8.0/ (Group)
|
| 181 |
+
namespace (object) (Dataset)
|
| 182 |
+
nwb.base (object) (Dataset)
|
| 183 |
+
nwb.behavior (object) (Dataset)
|
| 184 |
+
nwb.device (object) (Dataset)
|
| 185 |
+
nwb.ecephys (object) (Dataset)
|
| 186 |
+
nwb.epoch (object) (Dataset)
|
| 187 |
+
nwb.file (object) (Dataset)
|
| 188 |
+
nwb.icephys (object) (Dataset)
|
| 189 |
+
nwb.image (object) (Dataset)
|
| 190 |
+
nwb.misc (object) (Dataset)
|
| 191 |
+
nwb.ogen (object) (Dataset)
|
| 192 |
+
nwb.ophys (object) (Dataset)
|
| 193 |
+
nwb.retinotopy (object) (Dataset)
|
| 194 |
+
experiment-metadata/ (Group)
|
| 195 |
+
0.1.0/ (Group)
|
| 196 |
+
experiment_metadata.extensions (object) (Dataset)
|
| 197 |
+
namespace (object) (Dataset)
|
| 198 |
+
hdmf-common/ (Group)
|
| 199 |
+
1.8.0/ (Group)
|
| 200 |
+
base (object) (Dataset)
|
| 201 |
+
namespace (object) (Dataset)
|
| 202 |
+
sparse (object) (Dataset)
|
| 203 |
+
table (object) (Dataset)
|
| 204 |
+
hdmf-experimental/ (Group)
|
| 205 |
+
0.5.0/ (Group)
|
| 206 |
+
experimental (object) (Dataset)
|
| 207 |
+
namespace (object) (Dataset)
|
| 208 |
+
resources (object) (Dataset)
|
| 209 |
+
stimulus/ (Group)
|
| 210 |
+
presentation/ (Group)
|
| 211 |
+
chirp_stimulus/ (Group)
|
| 212 |
+
data (0, 0, 0) (uint8) (Dataset)
|
| 213 |
+
dimension (2,) (int64) (Dataset)
|
| 214 |
+
external_file (1,) (object) (Dataset)
|
| 215 |
+
format (object) (Dataset)
|
| 216 |
+
starting_time (float64) (Dataset)
|
| 217 |
+
movingbar_stimulus/ (Group)
|
| 218 |
+
data (0, 0, 0) (uint8) (Dataset)
|
| 219 |
+
dimension (2,) (int64) (Dataset)
|
| 220 |
+
external_file (1,) (object) (Dataset)
|
| 221 |
+
format (object) (Dataset)
|
| 222 |
+
starting_time (float64) (Dataset)
|
| 223 |
+
templates/ (Group)
|
| 224 |
+
timestamps_reference_time (object) (Dataset)
|
session_Experimenter_2_2022-09-21/experiment_1_RR/field_RGC1_structure.txt
ADDED
|
@@ -0,0 +1,224 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
NWB File Structure Report
|
| 2 |
+
========================
|
| 3 |
+
File: field_RGC1.nwb
|
| 4 |
+
Size: 24.44 MB
|
| 5 |
+
Generated: 2025-10-31 16:15:58
|
| 6 |
+
|
| 7 |
+
Structure:
|
| 8 |
+
----------
|
| 9 |
+
acquisition/ (Group)
|
| 10 |
+
TwoPhotonSeries_Cond_control_chirp_Pres_1/ (Group)
|
| 11 |
+
data (1532, 64, 64) (uint16) (Dataset)
|
| 12 |
+
imaging_plane/ (Group)
|
| 13 |
+
OpticalChannel/ (Group)
|
| 14 |
+
description (object) (Dataset)
|
| 15 |
+
emission_lambda (float64) (Dataset)
|
| 16 |
+
description (object) (Dataset)
|
| 17 |
+
device/ (Group)
|
| 18 |
+
excitation_lambda (float64) (Dataset)
|
| 19 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 20 |
+
imaging_rate (float64) (Dataset)
|
| 21 |
+
indicator (object) (Dataset)
|
| 22 |
+
location (object) (Dataset)
|
| 23 |
+
timestamps (1532,) (float64) (Dataset)
|
| 24 |
+
TwoPhotonSeries_Cond_control_movingbar_Pres_1/ (Group)
|
| 25 |
+
data (1001, 64, 64) (uint16) (Dataset)
|
| 26 |
+
imaging_plane/ (Group)
|
| 27 |
+
OpticalChannel/ (Group)
|
| 28 |
+
description (object) (Dataset)
|
| 29 |
+
emission_lambda (float64) (Dataset)
|
| 30 |
+
description (object) (Dataset)
|
| 31 |
+
device/ (Group)
|
| 32 |
+
excitation_lambda (float64) (Dataset)
|
| 33 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 34 |
+
imaging_rate (float64) (Dataset)
|
| 35 |
+
indicator (object) (Dataset)
|
| 36 |
+
location (object) (Dataset)
|
| 37 |
+
timestamps (1001,) (float64) (Dataset)
|
| 38 |
+
analysis/ (Group)
|
| 39 |
+
file_create_date (1,) (object) (Dataset)
|
| 40 |
+
general/ (Group)
|
| 41 |
+
devices/ (Group)
|
| 42 |
+
Microscope/ (Group)
|
| 43 |
+
experiment_metadata/ (Group)
|
| 44 |
+
experiment_number (object) (Dataset)
|
| 45 |
+
eye (object) (Dataset)
|
| 46 |
+
preparation_orientation (object) (Dataset)
|
| 47 |
+
setup_id (object) (Dataset)
|
| 48 |
+
experimenter (1,) (object) (Dataset)
|
| 49 |
+
institution (object) (Dataset)
|
| 50 |
+
lab (object) (Dataset)
|
| 51 |
+
optophysiology/ (Group)
|
| 52 |
+
ImagingPlane/ (Group)
|
| 53 |
+
OpticalChannel/ (Group)
|
| 54 |
+
description (object) (Dataset)
|
| 55 |
+
emission_lambda (float64) (Dataset)
|
| 56 |
+
description (object) (Dataset)
|
| 57 |
+
device/ (Group)
|
| 58 |
+
excitation_lambda (float64) (Dataset)
|
| 59 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 60 |
+
imaging_rate (float64) (Dataset)
|
| 61 |
+
indicator (object) (Dataset)
|
| 62 |
+
location (object) (Dataset)
|
| 63 |
+
related_publications (1,) (object) (Dataset)
|
| 64 |
+
subject/ (Group)
|
| 65 |
+
age (object) (Dataset)
|
| 66 |
+
date_of_birth (object) (Dataset)
|
| 67 |
+
genotype (object) (Dataset)
|
| 68 |
+
sex (object) (Dataset)
|
| 69 |
+
species (object) (Dataset)
|
| 70 |
+
identifier (object) (Dataset)
|
| 71 |
+
processing/ (Group)
|
| 72 |
+
Condition_control/ (Group)
|
| 73 |
+
cell_types/ (Group)
|
| 74 |
+
cluster_id (76,) (int64) (Dataset)
|
| 75 |
+
condition (76,) (object) (Dataset)
|
| 76 |
+
group_id (76,) (int64) (Dataset)
|
| 77 |
+
id (76,) (int64) (Dataset)
|
| 78 |
+
preproc_bar (76, 32) (float64) (Dataset)
|
| 79 |
+
preproc_chirp (76, 249) (float64) (Dataset)
|
| 80 |
+
prob_class (76,) (float64) (Dataset)
|
| 81 |
+
prob_cluster (76,) (float64) (Dataset)
|
| 82 |
+
prob_group (76,) (float64) (Dataset)
|
| 83 |
+
prob_supergroup (76,) (float64) (Dataset)
|
| 84 |
+
probs_per_cluster (76, 75) (float64) (Dataset)
|
| 85 |
+
roi_id (76,) (int64) (Dataset)
|
| 86 |
+
roi_table_link (76,) (int64) (Dataset)
|
| 87 |
+
supergroup (76,) (object) (Dataset)
|
| 88 |
+
chirp_60Hz_average/ (Group)
|
| 89 |
+
data (1982, 76) (float64) (Dataset)
|
| 90 |
+
timestamps (1982,) (float64) (Dataset)
|
| 91 |
+
chirp_8Hz_average/ (Group)
|
| 92 |
+
data (259, 76) (float64) (Dataset)
|
| 93 |
+
timestamps (259,) (float64) (Dataset)
|
| 94 |
+
chirp_features/ (Group)
|
| 95 |
+
chirp_on_off_index (76,) (float64) (Dataset)
|
| 96 |
+
chirp_pres_qidx (76,) (float64) (Dataset)
|
| 97 |
+
chirp_qidx (76,) (float64) (Dataset)
|
| 98 |
+
chirp_transience_index (76,) (float64) (Dataset)
|
| 99 |
+
id (76,) (int64) (Dataset)
|
| 100 |
+
roi_id (76,) (int64) (Dataset)
|
| 101 |
+
roi_table_link (76,) (int64) (Dataset)
|
| 102 |
+
chirp_preprocessed_traces/ (Group)
|
| 103 |
+
data (1532, 76) (float64) (Dataset)
|
| 104 |
+
timestamps (1532,) (float64) (Dataset)
|
| 105 |
+
chirp_snippets/ (Group)
|
| 106 |
+
data (259, 76, 5) (float64) (Dataset)
|
| 107 |
+
timestamps (259,) (float64) (Dataset)
|
| 108 |
+
chirp_snippets_t0/ (Group)
|
| 109 |
+
id (1,) (int64) (Dataset)
|
| 110 |
+
snippets_t0_array (1, 5, 76) (float64) (Dataset)
|
| 111 |
+
chirp_triggertimes_snippets/ (Group)
|
| 112 |
+
data (2, 76, 5) (float64) (Dataset)
|
| 113 |
+
starting_time (float64) (Dataset)
|
| 114 |
+
movingbar_features/ (Group)
|
| 115 |
+
bar_ds_index (76,) (float64) (Dataset)
|
| 116 |
+
bar_ds_pvalue (76,) (float64) (Dataset)
|
| 117 |
+
bar_os_index (76,) (float64) (Dataset)
|
| 118 |
+
bar_os_pvalue (76,) (float64) (Dataset)
|
| 119 |
+
bar_pref_dir (76,) (float64) (Dataset)
|
| 120 |
+
bar_pref_or (76,) (float64) (Dataset)
|
| 121 |
+
bar_pres_qidx (76,) (float64) (Dataset)
|
| 122 |
+
bar_qidx (76,) (float64) (Dataset)
|
| 123 |
+
id (76,) (int64) (Dataset)
|
| 124 |
+
roi_id (76,) (int64) (Dataset)
|
| 125 |
+
roi_table_link (76,) (int64) (Dataset)
|
| 126 |
+
movingbar_preprocessed_traces/ (Group)
|
| 127 |
+
data (1001, 76) (float64) (Dataset)
|
| 128 |
+
timestamps (1001,) (float64) (Dataset)
|
| 129 |
+
movingbar_snippets/ (Group)
|
| 130 |
+
data (33, 76, 24) (float32) (Dataset)
|
| 131 |
+
timestamps (33,) (float64) (Dataset)
|
| 132 |
+
movingbar_snippets_t0/ (Group)
|
| 133 |
+
id (1,) (int64) (Dataset)
|
| 134 |
+
snippets_t0_array (1, 24, 76) (float64) (Dataset)
|
| 135 |
+
movingbar_triggertimes_snippets/ (Group)
|
| 136 |
+
data (1, 76, 24) (float32) (Dataset)
|
| 137 |
+
starting_time (float64) (Dataset)
|
| 138 |
+
rois/ (Group)
|
| 139 |
+
ImageSegmentation/ (Group)
|
| 140 |
+
ROI masks/ (Group)
|
| 141 |
+
id (76,) (int64) (Dataset)
|
| 142 |
+
image_mask (76, 64, 64) (bool) (Dataset)
|
| 143 |
+
imaging_plane/ (Group)
|
| 144 |
+
OpticalChannel/ (Group)
|
| 145 |
+
description (object) (Dataset)
|
| 146 |
+
emission_lambda (float64) (Dataset)
|
| 147 |
+
description (object) (Dataset)
|
| 148 |
+
device/ (Group)
|
| 149 |
+
excitation_lambda (float64) (Dataset)
|
| 150 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 151 |
+
imaging_rate (float64) (Dataset)
|
| 152 |
+
indicator (object) (Dataset)
|
| 153 |
+
location (object) (Dataset)
|
| 154 |
+
nxpix (76,) (int64) (Dataset)
|
| 155 |
+
nypix (76,) (int64) (Dataset)
|
| 156 |
+
reference_images/ (Group)
|
| 157 |
+
roi_ids (76,) (int64) (Dataset)
|
| 158 |
+
roi_sizes (76,) (int64) (Dataset)
|
| 159 |
+
roi_sizes_um2 (76,) (float64) (Dataset)
|
| 160 |
+
session_info/ (Group)
|
| 161 |
+
presentation_sequence/ (Group)
|
| 162 |
+
absolute_start_time (2,) (object) (Dataset)
|
| 163 |
+
id (2,) (int64) (Dataset)
|
| 164 |
+
presentation_order (2,) (int64) (Dataset)
|
| 165 |
+
relative_start_time (2,) (float64) (Dataset)
|
| 166 |
+
stimulus_condition (2,) (object) (Dataset)
|
| 167 |
+
spatial/ (Group)
|
| 168 |
+
spatial_locations/ (Group)
|
| 169 |
+
field_temporal_nasal_pos_um (76,) (float64) (Dataset)
|
| 170 |
+
field_ventral_dorsal_pos_um (76,) (float64) (Dataset)
|
| 171 |
+
id (76,) (int64) (Dataset)
|
| 172 |
+
roi_id (76,) (int64) (Dataset)
|
| 173 |
+
roi_table_link (76,) (int64) (Dataset)
|
| 174 |
+
temporal_nasal_pos_um (76,) (float64) (Dataset)
|
| 175 |
+
ventral_dorsal_pos_um (76,) (float64) (Dataset)
|
| 176 |
+
session_description (object) (Dataset)
|
| 177 |
+
session_start_time (object) (Dataset)
|
| 178 |
+
specifications/ (Group)
|
| 179 |
+
core/ (Group)
|
| 180 |
+
2.8.0/ (Group)
|
| 181 |
+
namespace (object) (Dataset)
|
| 182 |
+
nwb.base (object) (Dataset)
|
| 183 |
+
nwb.behavior (object) (Dataset)
|
| 184 |
+
nwb.device (object) (Dataset)
|
| 185 |
+
nwb.ecephys (object) (Dataset)
|
| 186 |
+
nwb.epoch (object) (Dataset)
|
| 187 |
+
nwb.file (object) (Dataset)
|
| 188 |
+
nwb.icephys (object) (Dataset)
|
| 189 |
+
nwb.image (object) (Dataset)
|
| 190 |
+
nwb.misc (object) (Dataset)
|
| 191 |
+
nwb.ogen (object) (Dataset)
|
| 192 |
+
nwb.ophys (object) (Dataset)
|
| 193 |
+
nwb.retinotopy (object) (Dataset)
|
| 194 |
+
experiment-metadata/ (Group)
|
| 195 |
+
0.1.0/ (Group)
|
| 196 |
+
experiment_metadata.extensions (object) (Dataset)
|
| 197 |
+
namespace (object) (Dataset)
|
| 198 |
+
hdmf-common/ (Group)
|
| 199 |
+
1.8.0/ (Group)
|
| 200 |
+
base (object) (Dataset)
|
| 201 |
+
namespace (object) (Dataset)
|
| 202 |
+
sparse (object) (Dataset)
|
| 203 |
+
table (object) (Dataset)
|
| 204 |
+
hdmf-experimental/ (Group)
|
| 205 |
+
0.5.0/ (Group)
|
| 206 |
+
experimental (object) (Dataset)
|
| 207 |
+
namespace (object) (Dataset)
|
| 208 |
+
resources (object) (Dataset)
|
| 209 |
+
stimulus/ (Group)
|
| 210 |
+
presentation/ (Group)
|
| 211 |
+
chirp_stimulus/ (Group)
|
| 212 |
+
data (0, 0, 0) (uint8) (Dataset)
|
| 213 |
+
dimension (2,) (int64) (Dataset)
|
| 214 |
+
external_file (1,) (object) (Dataset)
|
| 215 |
+
format (object) (Dataset)
|
| 216 |
+
starting_time (float64) (Dataset)
|
| 217 |
+
movingbar_stimulus/ (Group)
|
| 218 |
+
data (0, 0, 0) (uint8) (Dataset)
|
| 219 |
+
dimension (2,) (int64) (Dataset)
|
| 220 |
+
external_file (1,) (object) (Dataset)
|
| 221 |
+
format (object) (Dataset)
|
| 222 |
+
starting_time (float64) (Dataset)
|
| 223 |
+
templates/ (Group)
|
| 224 |
+
timestamps_reference_time (object) (Dataset)
|
session_Experimenter_2_2022-09-21/experiment_1_RR/field_RGC2_structure.txt
ADDED
|
@@ -0,0 +1,224 @@
|
|
|
|
|
|
|
|
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|
|
|
|
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|
|
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|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
NWB File Structure Report
|
| 2 |
+
========================
|
| 3 |
+
File: field_RGC2.nwb
|
| 4 |
+
Size: 23.88 MB
|
| 5 |
+
Generated: 2025-10-31 16:16:01
|
| 6 |
+
|
| 7 |
+
Structure:
|
| 8 |
+
----------
|
| 9 |
+
acquisition/ (Group)
|
| 10 |
+
TwoPhotonSeries_Cond_control_chirp_Pres_1/ (Group)
|
| 11 |
+
data (1482, 64, 64) (uint16) (Dataset)
|
| 12 |
+
imaging_plane/ (Group)
|
| 13 |
+
OpticalChannel/ (Group)
|
| 14 |
+
description (object) (Dataset)
|
| 15 |
+
emission_lambda (float64) (Dataset)
|
| 16 |
+
description (object) (Dataset)
|
| 17 |
+
device/ (Group)
|
| 18 |
+
excitation_lambda (float64) (Dataset)
|
| 19 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 20 |
+
imaging_rate (float64) (Dataset)
|
| 21 |
+
indicator (object) (Dataset)
|
| 22 |
+
location (object) (Dataset)
|
| 23 |
+
timestamps (1482,) (float64) (Dataset)
|
| 24 |
+
TwoPhotonSeries_Cond_control_movingbar_Pres_1/ (Group)
|
| 25 |
+
data (964, 64, 64) (uint16) (Dataset)
|
| 26 |
+
imaging_plane/ (Group)
|
| 27 |
+
OpticalChannel/ (Group)
|
| 28 |
+
description (object) (Dataset)
|
| 29 |
+
emission_lambda (float64) (Dataset)
|
| 30 |
+
description (object) (Dataset)
|
| 31 |
+
device/ (Group)
|
| 32 |
+
excitation_lambda (float64) (Dataset)
|
| 33 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 34 |
+
imaging_rate (float64) (Dataset)
|
| 35 |
+
indicator (object) (Dataset)
|
| 36 |
+
location (object) (Dataset)
|
| 37 |
+
timestamps (964,) (float64) (Dataset)
|
| 38 |
+
analysis/ (Group)
|
| 39 |
+
file_create_date (1,) (object) (Dataset)
|
| 40 |
+
general/ (Group)
|
| 41 |
+
devices/ (Group)
|
| 42 |
+
Microscope/ (Group)
|
| 43 |
+
experiment_metadata/ (Group)
|
| 44 |
+
experiment_number (object) (Dataset)
|
| 45 |
+
eye (object) (Dataset)
|
| 46 |
+
preparation_orientation (object) (Dataset)
|
| 47 |
+
setup_id (object) (Dataset)
|
| 48 |
+
experimenter (1,) (object) (Dataset)
|
| 49 |
+
institution (object) (Dataset)
|
| 50 |
+
lab (object) (Dataset)
|
| 51 |
+
optophysiology/ (Group)
|
| 52 |
+
ImagingPlane/ (Group)
|
| 53 |
+
OpticalChannel/ (Group)
|
| 54 |
+
description (object) (Dataset)
|
| 55 |
+
emission_lambda (float64) (Dataset)
|
| 56 |
+
description (object) (Dataset)
|
| 57 |
+
device/ (Group)
|
| 58 |
+
excitation_lambda (float64) (Dataset)
|
| 59 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 60 |
+
imaging_rate (float64) (Dataset)
|
| 61 |
+
indicator (object) (Dataset)
|
| 62 |
+
location (object) (Dataset)
|
| 63 |
+
related_publications (1,) (object) (Dataset)
|
| 64 |
+
subject/ (Group)
|
| 65 |
+
age (object) (Dataset)
|
| 66 |
+
date_of_birth (object) (Dataset)
|
| 67 |
+
genotype (object) (Dataset)
|
| 68 |
+
sex (object) (Dataset)
|
| 69 |
+
species (object) (Dataset)
|
| 70 |
+
identifier (object) (Dataset)
|
| 71 |
+
processing/ (Group)
|
| 72 |
+
Condition_control/ (Group)
|
| 73 |
+
cell_types/ (Group)
|
| 74 |
+
cluster_id (79,) (int64) (Dataset)
|
| 75 |
+
condition (79,) (object) (Dataset)
|
| 76 |
+
group_id (79,) (int64) (Dataset)
|
| 77 |
+
id (79,) (int64) (Dataset)
|
| 78 |
+
preproc_bar (79, 32) (float64) (Dataset)
|
| 79 |
+
preproc_chirp (79, 249) (float64) (Dataset)
|
| 80 |
+
prob_class (79,) (float64) (Dataset)
|
| 81 |
+
prob_cluster (79,) (float64) (Dataset)
|
| 82 |
+
prob_group (79,) (float64) (Dataset)
|
| 83 |
+
prob_supergroup (79,) (float64) (Dataset)
|
| 84 |
+
probs_per_cluster (79, 75) (float64) (Dataset)
|
| 85 |
+
roi_id (79,) (int64) (Dataset)
|
| 86 |
+
roi_table_link (79,) (int64) (Dataset)
|
| 87 |
+
supergroup (79,) (object) (Dataset)
|
| 88 |
+
chirp_60Hz_average/ (Group)
|
| 89 |
+
data (1982, 79) (float64) (Dataset)
|
| 90 |
+
timestamps (1982,) (float64) (Dataset)
|
| 91 |
+
chirp_8Hz_average/ (Group)
|
| 92 |
+
data (259, 79) (float64) (Dataset)
|
| 93 |
+
timestamps (259,) (float64) (Dataset)
|
| 94 |
+
chirp_features/ (Group)
|
| 95 |
+
chirp_on_off_index (79,) (float64) (Dataset)
|
| 96 |
+
chirp_pres_qidx (79,) (float64) (Dataset)
|
| 97 |
+
chirp_qidx (79,) (float64) (Dataset)
|
| 98 |
+
chirp_transience_index (79,) (float64) (Dataset)
|
| 99 |
+
id (79,) (int64) (Dataset)
|
| 100 |
+
roi_id (79,) (int64) (Dataset)
|
| 101 |
+
roi_table_link (79,) (int64) (Dataset)
|
| 102 |
+
chirp_preprocessed_traces/ (Group)
|
| 103 |
+
data (1482, 79) (float64) (Dataset)
|
| 104 |
+
timestamps (1482,) (float64) (Dataset)
|
| 105 |
+
chirp_snippets/ (Group)
|
| 106 |
+
data (259, 79, 5) (float64) (Dataset)
|
| 107 |
+
timestamps (259,) (float64) (Dataset)
|
| 108 |
+
chirp_snippets_t0/ (Group)
|
| 109 |
+
id (1,) (int64) (Dataset)
|
| 110 |
+
snippets_t0_array (1, 5, 79) (float64) (Dataset)
|
| 111 |
+
chirp_triggertimes_snippets/ (Group)
|
| 112 |
+
data (2, 79, 5) (float64) (Dataset)
|
| 113 |
+
starting_time (float64) (Dataset)
|
| 114 |
+
movingbar_features/ (Group)
|
| 115 |
+
bar_ds_index (79,) (float64) (Dataset)
|
| 116 |
+
bar_ds_pvalue (79,) (float64) (Dataset)
|
| 117 |
+
bar_os_index (79,) (float64) (Dataset)
|
| 118 |
+
bar_os_pvalue (79,) (float64) (Dataset)
|
| 119 |
+
bar_pref_dir (79,) (float64) (Dataset)
|
| 120 |
+
bar_pref_or (79,) (float64) (Dataset)
|
| 121 |
+
bar_pres_qidx (79,) (float64) (Dataset)
|
| 122 |
+
bar_qidx (79,) (float64) (Dataset)
|
| 123 |
+
id (79,) (int64) (Dataset)
|
| 124 |
+
roi_id (79,) (int64) (Dataset)
|
| 125 |
+
roi_table_link (79,) (int64) (Dataset)
|
| 126 |
+
movingbar_preprocessed_traces/ (Group)
|
| 127 |
+
data (964, 79) (float64) (Dataset)
|
| 128 |
+
timestamps (964,) (float64) (Dataset)
|
| 129 |
+
movingbar_snippets/ (Group)
|
| 130 |
+
data (33, 79, 24) (float32) (Dataset)
|
| 131 |
+
timestamps (33,) (float64) (Dataset)
|
| 132 |
+
movingbar_snippets_t0/ (Group)
|
| 133 |
+
id (1,) (int64) (Dataset)
|
| 134 |
+
snippets_t0_array (1, 24, 79) (float64) (Dataset)
|
| 135 |
+
movingbar_triggertimes_snippets/ (Group)
|
| 136 |
+
data (1, 79, 24) (float32) (Dataset)
|
| 137 |
+
starting_time (float64) (Dataset)
|
| 138 |
+
rois/ (Group)
|
| 139 |
+
ImageSegmentation/ (Group)
|
| 140 |
+
ROI masks/ (Group)
|
| 141 |
+
id (79,) (int64) (Dataset)
|
| 142 |
+
image_mask (79, 64, 64) (bool) (Dataset)
|
| 143 |
+
imaging_plane/ (Group)
|
| 144 |
+
OpticalChannel/ (Group)
|
| 145 |
+
description (object) (Dataset)
|
| 146 |
+
emission_lambda (float64) (Dataset)
|
| 147 |
+
description (object) (Dataset)
|
| 148 |
+
device/ (Group)
|
| 149 |
+
excitation_lambda (float64) (Dataset)
|
| 150 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 151 |
+
imaging_rate (float64) (Dataset)
|
| 152 |
+
indicator (object) (Dataset)
|
| 153 |
+
location (object) (Dataset)
|
| 154 |
+
nxpix (79,) (int64) (Dataset)
|
| 155 |
+
nypix (79,) (int64) (Dataset)
|
| 156 |
+
reference_images/ (Group)
|
| 157 |
+
roi_ids (79,) (int64) (Dataset)
|
| 158 |
+
roi_sizes (79,) (int64) (Dataset)
|
| 159 |
+
roi_sizes_um2 (79,) (float64) (Dataset)
|
| 160 |
+
session_info/ (Group)
|
| 161 |
+
presentation_sequence/ (Group)
|
| 162 |
+
absolute_start_time (2,) (object) (Dataset)
|
| 163 |
+
id (2,) (int64) (Dataset)
|
| 164 |
+
presentation_order (2,) (int64) (Dataset)
|
| 165 |
+
relative_start_time (2,) (float64) (Dataset)
|
| 166 |
+
stimulus_condition (2,) (object) (Dataset)
|
| 167 |
+
spatial/ (Group)
|
| 168 |
+
spatial_locations/ (Group)
|
| 169 |
+
field_temporal_nasal_pos_um (79,) (float64) (Dataset)
|
| 170 |
+
field_ventral_dorsal_pos_um (79,) (float64) (Dataset)
|
| 171 |
+
id (79,) (int64) (Dataset)
|
| 172 |
+
roi_id (79,) (int64) (Dataset)
|
| 173 |
+
roi_table_link (79,) (int64) (Dataset)
|
| 174 |
+
temporal_nasal_pos_um (79,) (float64) (Dataset)
|
| 175 |
+
ventral_dorsal_pos_um (79,) (float64) (Dataset)
|
| 176 |
+
session_description (object) (Dataset)
|
| 177 |
+
session_start_time (object) (Dataset)
|
| 178 |
+
specifications/ (Group)
|
| 179 |
+
core/ (Group)
|
| 180 |
+
2.8.0/ (Group)
|
| 181 |
+
namespace (object) (Dataset)
|
| 182 |
+
nwb.base (object) (Dataset)
|
| 183 |
+
nwb.behavior (object) (Dataset)
|
| 184 |
+
nwb.device (object) (Dataset)
|
| 185 |
+
nwb.ecephys (object) (Dataset)
|
| 186 |
+
nwb.epoch (object) (Dataset)
|
| 187 |
+
nwb.file (object) (Dataset)
|
| 188 |
+
nwb.icephys (object) (Dataset)
|
| 189 |
+
nwb.image (object) (Dataset)
|
| 190 |
+
nwb.misc (object) (Dataset)
|
| 191 |
+
nwb.ogen (object) (Dataset)
|
| 192 |
+
nwb.ophys (object) (Dataset)
|
| 193 |
+
nwb.retinotopy (object) (Dataset)
|
| 194 |
+
experiment-metadata/ (Group)
|
| 195 |
+
0.1.0/ (Group)
|
| 196 |
+
experiment_metadata.extensions (object) (Dataset)
|
| 197 |
+
namespace (object) (Dataset)
|
| 198 |
+
hdmf-common/ (Group)
|
| 199 |
+
1.8.0/ (Group)
|
| 200 |
+
base (object) (Dataset)
|
| 201 |
+
namespace (object) (Dataset)
|
| 202 |
+
sparse (object) (Dataset)
|
| 203 |
+
table (object) (Dataset)
|
| 204 |
+
hdmf-experimental/ (Group)
|
| 205 |
+
0.5.0/ (Group)
|
| 206 |
+
experimental (object) (Dataset)
|
| 207 |
+
namespace (object) (Dataset)
|
| 208 |
+
resources (object) (Dataset)
|
| 209 |
+
stimulus/ (Group)
|
| 210 |
+
presentation/ (Group)
|
| 211 |
+
chirp_stimulus/ (Group)
|
| 212 |
+
data (0, 0, 0) (uint8) (Dataset)
|
| 213 |
+
dimension (2,) (int64) (Dataset)
|
| 214 |
+
external_file (1,) (object) (Dataset)
|
| 215 |
+
format (object) (Dataset)
|
| 216 |
+
starting_time (float64) (Dataset)
|
| 217 |
+
movingbar_stimulus/ (Group)
|
| 218 |
+
data (0, 0, 0) (uint8) (Dataset)
|
| 219 |
+
dimension (2,) (int64) (Dataset)
|
| 220 |
+
external_file (1,) (object) (Dataset)
|
| 221 |
+
format (object) (Dataset)
|
| 222 |
+
starting_time (float64) (Dataset)
|
| 223 |
+
templates/ (Group)
|
| 224 |
+
timestamps_reference_time (object) (Dataset)
|
session_Experimenter_2_2022-09-21/experiment_1_RR/field_RGC3_structure.txt
ADDED
|
@@ -0,0 +1,224 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
NWB File Structure Report
|
| 2 |
+
========================
|
| 3 |
+
File: field_RGC3.nwb
|
| 4 |
+
Size: 27.51 MB
|
| 5 |
+
Generated: 2025-10-31 16:16:03
|
| 6 |
+
|
| 7 |
+
Structure:
|
| 8 |
+
----------
|
| 9 |
+
acquisition/ (Group)
|
| 10 |
+
TwoPhotonSeries_Cond_control_chirp_Pres_1/ (Group)
|
| 11 |
+
data (1865, 64, 64) (uint16) (Dataset)
|
| 12 |
+
imaging_plane/ (Group)
|
| 13 |
+
OpticalChannel/ (Group)
|
| 14 |
+
description (object) (Dataset)
|
| 15 |
+
emission_lambda (float64) (Dataset)
|
| 16 |
+
description (object) (Dataset)
|
| 17 |
+
device/ (Group)
|
| 18 |
+
excitation_lambda (float64) (Dataset)
|
| 19 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 20 |
+
imaging_rate (float64) (Dataset)
|
| 21 |
+
indicator (object) (Dataset)
|
| 22 |
+
location (object) (Dataset)
|
| 23 |
+
timestamps (1865,) (float64) (Dataset)
|
| 24 |
+
TwoPhotonSeries_Cond_control_movingbar_Pres_1/ (Group)
|
| 25 |
+
data (963, 64, 64) (uint16) (Dataset)
|
| 26 |
+
imaging_plane/ (Group)
|
| 27 |
+
OpticalChannel/ (Group)
|
| 28 |
+
description (object) (Dataset)
|
| 29 |
+
emission_lambda (float64) (Dataset)
|
| 30 |
+
description (object) (Dataset)
|
| 31 |
+
device/ (Group)
|
| 32 |
+
excitation_lambda (float64) (Dataset)
|
| 33 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 34 |
+
imaging_rate (float64) (Dataset)
|
| 35 |
+
indicator (object) (Dataset)
|
| 36 |
+
location (object) (Dataset)
|
| 37 |
+
timestamps (963,) (float64) (Dataset)
|
| 38 |
+
analysis/ (Group)
|
| 39 |
+
file_create_date (1,) (object) (Dataset)
|
| 40 |
+
general/ (Group)
|
| 41 |
+
devices/ (Group)
|
| 42 |
+
Microscope/ (Group)
|
| 43 |
+
experiment_metadata/ (Group)
|
| 44 |
+
experiment_number (object) (Dataset)
|
| 45 |
+
eye (object) (Dataset)
|
| 46 |
+
preparation_orientation (object) (Dataset)
|
| 47 |
+
setup_id (object) (Dataset)
|
| 48 |
+
experimenter (1,) (object) (Dataset)
|
| 49 |
+
institution (object) (Dataset)
|
| 50 |
+
lab (object) (Dataset)
|
| 51 |
+
optophysiology/ (Group)
|
| 52 |
+
ImagingPlane/ (Group)
|
| 53 |
+
OpticalChannel/ (Group)
|
| 54 |
+
description (object) (Dataset)
|
| 55 |
+
emission_lambda (float64) (Dataset)
|
| 56 |
+
description (object) (Dataset)
|
| 57 |
+
device/ (Group)
|
| 58 |
+
excitation_lambda (float64) (Dataset)
|
| 59 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 60 |
+
imaging_rate (float64) (Dataset)
|
| 61 |
+
indicator (object) (Dataset)
|
| 62 |
+
location (object) (Dataset)
|
| 63 |
+
related_publications (1,) (object) (Dataset)
|
| 64 |
+
subject/ (Group)
|
| 65 |
+
age (object) (Dataset)
|
| 66 |
+
date_of_birth (object) (Dataset)
|
| 67 |
+
genotype (object) (Dataset)
|
| 68 |
+
sex (object) (Dataset)
|
| 69 |
+
species (object) (Dataset)
|
| 70 |
+
identifier (object) (Dataset)
|
| 71 |
+
processing/ (Group)
|
| 72 |
+
Condition_control/ (Group)
|
| 73 |
+
cell_types/ (Group)
|
| 74 |
+
cluster_id (86,) (int64) (Dataset)
|
| 75 |
+
condition (86,) (object) (Dataset)
|
| 76 |
+
group_id (86,) (int64) (Dataset)
|
| 77 |
+
id (86,) (int64) (Dataset)
|
| 78 |
+
preproc_bar (86, 32) (float64) (Dataset)
|
| 79 |
+
preproc_chirp (86, 249) (float64) (Dataset)
|
| 80 |
+
prob_class (86,) (float64) (Dataset)
|
| 81 |
+
prob_cluster (86,) (float64) (Dataset)
|
| 82 |
+
prob_group (86,) (float64) (Dataset)
|
| 83 |
+
prob_supergroup (86,) (float64) (Dataset)
|
| 84 |
+
probs_per_cluster (86, 75) (float64) (Dataset)
|
| 85 |
+
roi_id (86,) (int64) (Dataset)
|
| 86 |
+
roi_table_link (86,) (int64) (Dataset)
|
| 87 |
+
supergroup (86,) (object) (Dataset)
|
| 88 |
+
chirp_60Hz_average/ (Group)
|
| 89 |
+
data (1982, 86) (float64) (Dataset)
|
| 90 |
+
timestamps (1982,) (float64) (Dataset)
|
| 91 |
+
chirp_8Hz_average/ (Group)
|
| 92 |
+
data (259, 86) (float64) (Dataset)
|
| 93 |
+
timestamps (259,) (float64) (Dataset)
|
| 94 |
+
chirp_features/ (Group)
|
| 95 |
+
chirp_on_off_index (86,) (float64) (Dataset)
|
| 96 |
+
chirp_pres_qidx (86,) (float64) (Dataset)
|
| 97 |
+
chirp_qidx (86,) (float64) (Dataset)
|
| 98 |
+
chirp_transience_index (86,) (float64) (Dataset)
|
| 99 |
+
id (86,) (int64) (Dataset)
|
| 100 |
+
roi_id (86,) (int64) (Dataset)
|
| 101 |
+
roi_table_link (86,) (int64) (Dataset)
|
| 102 |
+
chirp_preprocessed_traces/ (Group)
|
| 103 |
+
data (1865, 86) (float64) (Dataset)
|
| 104 |
+
timestamps (1865,) (float64) (Dataset)
|
| 105 |
+
chirp_snippets/ (Group)
|
| 106 |
+
data (259, 86, 5) (float64) (Dataset)
|
| 107 |
+
timestamps (259,) (float64) (Dataset)
|
| 108 |
+
chirp_snippets_t0/ (Group)
|
| 109 |
+
id (1,) (int64) (Dataset)
|
| 110 |
+
snippets_t0_array (1, 5, 86) (float64) (Dataset)
|
| 111 |
+
chirp_triggertimes_snippets/ (Group)
|
| 112 |
+
data (2, 86, 5) (float64) (Dataset)
|
| 113 |
+
starting_time (float64) (Dataset)
|
| 114 |
+
movingbar_features/ (Group)
|
| 115 |
+
bar_ds_index (86,) (float64) (Dataset)
|
| 116 |
+
bar_ds_pvalue (86,) (float64) (Dataset)
|
| 117 |
+
bar_os_index (86,) (float64) (Dataset)
|
| 118 |
+
bar_os_pvalue (86,) (float64) (Dataset)
|
| 119 |
+
bar_pref_dir (86,) (float64) (Dataset)
|
| 120 |
+
bar_pref_or (86,) (float64) (Dataset)
|
| 121 |
+
bar_pres_qidx (86,) (float64) (Dataset)
|
| 122 |
+
bar_qidx (86,) (float64) (Dataset)
|
| 123 |
+
id (86,) (int64) (Dataset)
|
| 124 |
+
roi_id (86,) (int64) (Dataset)
|
| 125 |
+
roi_table_link (86,) (int64) (Dataset)
|
| 126 |
+
movingbar_preprocessed_traces/ (Group)
|
| 127 |
+
data (963, 86) (float64) (Dataset)
|
| 128 |
+
timestamps (963,) (float64) (Dataset)
|
| 129 |
+
movingbar_snippets/ (Group)
|
| 130 |
+
data (33, 86, 24) (float32) (Dataset)
|
| 131 |
+
timestamps (33,) (float64) (Dataset)
|
| 132 |
+
movingbar_snippets_t0/ (Group)
|
| 133 |
+
id (1,) (int64) (Dataset)
|
| 134 |
+
snippets_t0_array (1, 24, 86) (float64) (Dataset)
|
| 135 |
+
movingbar_triggertimes_snippets/ (Group)
|
| 136 |
+
data (1, 86, 24) (float32) (Dataset)
|
| 137 |
+
starting_time (float64) (Dataset)
|
| 138 |
+
rois/ (Group)
|
| 139 |
+
ImageSegmentation/ (Group)
|
| 140 |
+
ROI masks/ (Group)
|
| 141 |
+
id (86,) (int64) (Dataset)
|
| 142 |
+
image_mask (86, 64, 64) (bool) (Dataset)
|
| 143 |
+
imaging_plane/ (Group)
|
| 144 |
+
OpticalChannel/ (Group)
|
| 145 |
+
description (object) (Dataset)
|
| 146 |
+
emission_lambda (float64) (Dataset)
|
| 147 |
+
description (object) (Dataset)
|
| 148 |
+
device/ (Group)
|
| 149 |
+
excitation_lambda (float64) (Dataset)
|
| 150 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 151 |
+
imaging_rate (float64) (Dataset)
|
| 152 |
+
indicator (object) (Dataset)
|
| 153 |
+
location (object) (Dataset)
|
| 154 |
+
nxpix (86,) (int64) (Dataset)
|
| 155 |
+
nypix (86,) (int64) (Dataset)
|
| 156 |
+
reference_images/ (Group)
|
| 157 |
+
roi_ids (86,) (int64) (Dataset)
|
| 158 |
+
roi_sizes (86,) (int64) (Dataset)
|
| 159 |
+
roi_sizes_um2 (86,) (float64) (Dataset)
|
| 160 |
+
session_info/ (Group)
|
| 161 |
+
presentation_sequence/ (Group)
|
| 162 |
+
absolute_start_time (2,) (object) (Dataset)
|
| 163 |
+
id (2,) (int64) (Dataset)
|
| 164 |
+
presentation_order (2,) (int64) (Dataset)
|
| 165 |
+
relative_start_time (2,) (float64) (Dataset)
|
| 166 |
+
stimulus_condition (2,) (object) (Dataset)
|
| 167 |
+
spatial/ (Group)
|
| 168 |
+
spatial_locations/ (Group)
|
| 169 |
+
field_temporal_nasal_pos_um (86,) (float64) (Dataset)
|
| 170 |
+
field_ventral_dorsal_pos_um (86,) (float64) (Dataset)
|
| 171 |
+
id (86,) (int64) (Dataset)
|
| 172 |
+
roi_id (86,) (int64) (Dataset)
|
| 173 |
+
roi_table_link (86,) (int64) (Dataset)
|
| 174 |
+
temporal_nasal_pos_um (86,) (float64) (Dataset)
|
| 175 |
+
ventral_dorsal_pos_um (86,) (float64) (Dataset)
|
| 176 |
+
session_description (object) (Dataset)
|
| 177 |
+
session_start_time (object) (Dataset)
|
| 178 |
+
specifications/ (Group)
|
| 179 |
+
core/ (Group)
|
| 180 |
+
2.8.0/ (Group)
|
| 181 |
+
namespace (object) (Dataset)
|
| 182 |
+
nwb.base (object) (Dataset)
|
| 183 |
+
nwb.behavior (object) (Dataset)
|
| 184 |
+
nwb.device (object) (Dataset)
|
| 185 |
+
nwb.ecephys (object) (Dataset)
|
| 186 |
+
nwb.epoch (object) (Dataset)
|
| 187 |
+
nwb.file (object) (Dataset)
|
| 188 |
+
nwb.icephys (object) (Dataset)
|
| 189 |
+
nwb.image (object) (Dataset)
|
| 190 |
+
nwb.misc (object) (Dataset)
|
| 191 |
+
nwb.ogen (object) (Dataset)
|
| 192 |
+
nwb.ophys (object) (Dataset)
|
| 193 |
+
nwb.retinotopy (object) (Dataset)
|
| 194 |
+
experiment-metadata/ (Group)
|
| 195 |
+
0.1.0/ (Group)
|
| 196 |
+
experiment_metadata.extensions (object) (Dataset)
|
| 197 |
+
namespace (object) (Dataset)
|
| 198 |
+
hdmf-common/ (Group)
|
| 199 |
+
1.8.0/ (Group)
|
| 200 |
+
base (object) (Dataset)
|
| 201 |
+
namespace (object) (Dataset)
|
| 202 |
+
sparse (object) (Dataset)
|
| 203 |
+
table (object) (Dataset)
|
| 204 |
+
hdmf-experimental/ (Group)
|
| 205 |
+
0.5.0/ (Group)
|
| 206 |
+
experimental (object) (Dataset)
|
| 207 |
+
namespace (object) (Dataset)
|
| 208 |
+
resources (object) (Dataset)
|
| 209 |
+
stimulus/ (Group)
|
| 210 |
+
presentation/ (Group)
|
| 211 |
+
chirp_stimulus/ (Group)
|
| 212 |
+
data (0, 0, 0) (uint8) (Dataset)
|
| 213 |
+
dimension (2,) (int64) (Dataset)
|
| 214 |
+
external_file (1,) (object) (Dataset)
|
| 215 |
+
format (object) (Dataset)
|
| 216 |
+
starting_time (float64) (Dataset)
|
| 217 |
+
movingbar_stimulus/ (Group)
|
| 218 |
+
data (0, 0, 0) (uint8) (Dataset)
|
| 219 |
+
dimension (2,) (int64) (Dataset)
|
| 220 |
+
external_file (1,) (object) (Dataset)
|
| 221 |
+
format (object) (Dataset)
|
| 222 |
+
starting_time (float64) (Dataset)
|
| 223 |
+
templates/ (Group)
|
| 224 |
+
timestamps_reference_time (object) (Dataset)
|
session_Experimenter_2_2022-09-21/experiment_1_RR/field_RGC4_structure.txt
ADDED
|
@@ -0,0 +1,224 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
| 1 |
+
NWB File Structure Report
|
| 2 |
+
========================
|
| 3 |
+
File: field_RGC4.nwb
|
| 4 |
+
Size: 26.01 MB
|
| 5 |
+
Generated: 2025-10-31 16:16:06
|
| 6 |
+
|
| 7 |
+
Structure:
|
| 8 |
+
----------
|
| 9 |
+
acquisition/ (Group)
|
| 10 |
+
TwoPhotonSeries_Cond_control_chirp_Pres_1/ (Group)
|
| 11 |
+
data (1593, 64, 64) (uint16) (Dataset)
|
| 12 |
+
imaging_plane/ (Group)
|
| 13 |
+
OpticalChannel/ (Group)
|
| 14 |
+
description (object) (Dataset)
|
| 15 |
+
emission_lambda (float64) (Dataset)
|
| 16 |
+
description (object) (Dataset)
|
| 17 |
+
device/ (Group)
|
| 18 |
+
excitation_lambda (float64) (Dataset)
|
| 19 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 20 |
+
imaging_rate (float64) (Dataset)
|
| 21 |
+
indicator (object) (Dataset)
|
| 22 |
+
location (object) (Dataset)
|
| 23 |
+
timestamps (1593,) (float64) (Dataset)
|
| 24 |
+
TwoPhotonSeries_Cond_control_movingbar_Pres_1/ (Group)
|
| 25 |
+
data (1038, 64, 64) (uint16) (Dataset)
|
| 26 |
+
imaging_plane/ (Group)
|
| 27 |
+
OpticalChannel/ (Group)
|
| 28 |
+
description (object) (Dataset)
|
| 29 |
+
emission_lambda (float64) (Dataset)
|
| 30 |
+
description (object) (Dataset)
|
| 31 |
+
device/ (Group)
|
| 32 |
+
excitation_lambda (float64) (Dataset)
|
| 33 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 34 |
+
imaging_rate (float64) (Dataset)
|
| 35 |
+
indicator (object) (Dataset)
|
| 36 |
+
location (object) (Dataset)
|
| 37 |
+
timestamps (1038,) (float64) (Dataset)
|
| 38 |
+
analysis/ (Group)
|
| 39 |
+
file_create_date (1,) (object) (Dataset)
|
| 40 |
+
general/ (Group)
|
| 41 |
+
devices/ (Group)
|
| 42 |
+
Microscope/ (Group)
|
| 43 |
+
experiment_metadata/ (Group)
|
| 44 |
+
experiment_number (object) (Dataset)
|
| 45 |
+
eye (object) (Dataset)
|
| 46 |
+
preparation_orientation (object) (Dataset)
|
| 47 |
+
setup_id (object) (Dataset)
|
| 48 |
+
experimenter (1,) (object) (Dataset)
|
| 49 |
+
institution (object) (Dataset)
|
| 50 |
+
lab (object) (Dataset)
|
| 51 |
+
optophysiology/ (Group)
|
| 52 |
+
ImagingPlane/ (Group)
|
| 53 |
+
OpticalChannel/ (Group)
|
| 54 |
+
description (object) (Dataset)
|
| 55 |
+
emission_lambda (float64) (Dataset)
|
| 56 |
+
description (object) (Dataset)
|
| 57 |
+
device/ (Group)
|
| 58 |
+
excitation_lambda (float64) (Dataset)
|
| 59 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 60 |
+
imaging_rate (float64) (Dataset)
|
| 61 |
+
indicator (object) (Dataset)
|
| 62 |
+
location (object) (Dataset)
|
| 63 |
+
related_publications (1,) (object) (Dataset)
|
| 64 |
+
subject/ (Group)
|
| 65 |
+
age (object) (Dataset)
|
| 66 |
+
date_of_birth (object) (Dataset)
|
| 67 |
+
genotype (object) (Dataset)
|
| 68 |
+
sex (object) (Dataset)
|
| 69 |
+
species (object) (Dataset)
|
| 70 |
+
identifier (object) (Dataset)
|
| 71 |
+
processing/ (Group)
|
| 72 |
+
Condition_control/ (Group)
|
| 73 |
+
cell_types/ (Group)
|
| 74 |
+
cluster_id (89,) (int64) (Dataset)
|
| 75 |
+
condition (89,) (object) (Dataset)
|
| 76 |
+
group_id (89,) (int64) (Dataset)
|
| 77 |
+
id (89,) (int64) (Dataset)
|
| 78 |
+
preproc_bar (89, 32) (float64) (Dataset)
|
| 79 |
+
preproc_chirp (89, 249) (float64) (Dataset)
|
| 80 |
+
prob_class (89,) (float64) (Dataset)
|
| 81 |
+
prob_cluster (89,) (float64) (Dataset)
|
| 82 |
+
prob_group (89,) (float64) (Dataset)
|
| 83 |
+
prob_supergroup (89,) (float64) (Dataset)
|
| 84 |
+
probs_per_cluster (89, 75) (float64) (Dataset)
|
| 85 |
+
roi_id (89,) (int64) (Dataset)
|
| 86 |
+
roi_table_link (89,) (int64) (Dataset)
|
| 87 |
+
supergroup (89,) (object) (Dataset)
|
| 88 |
+
chirp_60Hz_average/ (Group)
|
| 89 |
+
data (1982, 89) (float64) (Dataset)
|
| 90 |
+
timestamps (1982,) (float64) (Dataset)
|
| 91 |
+
chirp_8Hz_average/ (Group)
|
| 92 |
+
data (259, 89) (float64) (Dataset)
|
| 93 |
+
timestamps (259,) (float64) (Dataset)
|
| 94 |
+
chirp_features/ (Group)
|
| 95 |
+
chirp_on_off_index (89,) (float64) (Dataset)
|
| 96 |
+
chirp_pres_qidx (89,) (float64) (Dataset)
|
| 97 |
+
chirp_qidx (89,) (float64) (Dataset)
|
| 98 |
+
chirp_transience_index (89,) (float64) (Dataset)
|
| 99 |
+
id (89,) (int64) (Dataset)
|
| 100 |
+
roi_id (89,) (int64) (Dataset)
|
| 101 |
+
roi_table_link (89,) (int64) (Dataset)
|
| 102 |
+
chirp_preprocessed_traces/ (Group)
|
| 103 |
+
data (1593, 89) (float64) (Dataset)
|
| 104 |
+
timestamps (1593,) (float64) (Dataset)
|
| 105 |
+
chirp_snippets/ (Group)
|
| 106 |
+
data (259, 89, 5) (float64) (Dataset)
|
| 107 |
+
timestamps (259,) (float64) (Dataset)
|
| 108 |
+
chirp_snippets_t0/ (Group)
|
| 109 |
+
id (1,) (int64) (Dataset)
|
| 110 |
+
snippets_t0_array (1, 5, 89) (float64) (Dataset)
|
| 111 |
+
chirp_triggertimes_snippets/ (Group)
|
| 112 |
+
data (2, 89, 5) (float64) (Dataset)
|
| 113 |
+
starting_time (float64) (Dataset)
|
| 114 |
+
movingbar_features/ (Group)
|
| 115 |
+
bar_ds_index (89,) (float64) (Dataset)
|
| 116 |
+
bar_ds_pvalue (89,) (float64) (Dataset)
|
| 117 |
+
bar_os_index (89,) (float64) (Dataset)
|
| 118 |
+
bar_os_pvalue (89,) (float64) (Dataset)
|
| 119 |
+
bar_pref_dir (89,) (float64) (Dataset)
|
| 120 |
+
bar_pref_or (89,) (float64) (Dataset)
|
| 121 |
+
bar_pres_qidx (89,) (float64) (Dataset)
|
| 122 |
+
bar_qidx (89,) (float64) (Dataset)
|
| 123 |
+
id (89,) (int64) (Dataset)
|
| 124 |
+
roi_id (89,) (int64) (Dataset)
|
| 125 |
+
roi_table_link (89,) (int64) (Dataset)
|
| 126 |
+
movingbar_preprocessed_traces/ (Group)
|
| 127 |
+
data (1038, 89) (float64) (Dataset)
|
| 128 |
+
timestamps (1038,) (float64) (Dataset)
|
| 129 |
+
movingbar_snippets/ (Group)
|
| 130 |
+
data (33, 89, 24) (float32) (Dataset)
|
| 131 |
+
timestamps (33,) (float64) (Dataset)
|
| 132 |
+
movingbar_snippets_t0/ (Group)
|
| 133 |
+
id (1,) (int64) (Dataset)
|
| 134 |
+
snippets_t0_array (1, 24, 89) (float64) (Dataset)
|
| 135 |
+
movingbar_triggertimes_snippets/ (Group)
|
| 136 |
+
data (1, 89, 24) (float32) (Dataset)
|
| 137 |
+
starting_time (float64) (Dataset)
|
| 138 |
+
rois/ (Group)
|
| 139 |
+
ImageSegmentation/ (Group)
|
| 140 |
+
ROI masks/ (Group)
|
| 141 |
+
id (89,) (int64) (Dataset)
|
| 142 |
+
image_mask (89, 64, 64) (bool) (Dataset)
|
| 143 |
+
imaging_plane/ (Group)
|
| 144 |
+
OpticalChannel/ (Group)
|
| 145 |
+
description (object) (Dataset)
|
| 146 |
+
emission_lambda (float64) (Dataset)
|
| 147 |
+
description (object) (Dataset)
|
| 148 |
+
device/ (Group)
|
| 149 |
+
excitation_lambda (float64) (Dataset)
|
| 150 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 151 |
+
imaging_rate (float64) (Dataset)
|
| 152 |
+
indicator (object) (Dataset)
|
| 153 |
+
location (object) (Dataset)
|
| 154 |
+
nxpix (89,) (int64) (Dataset)
|
| 155 |
+
nypix (89,) (int64) (Dataset)
|
| 156 |
+
reference_images/ (Group)
|
| 157 |
+
roi_ids (89,) (int64) (Dataset)
|
| 158 |
+
roi_sizes (89,) (int64) (Dataset)
|
| 159 |
+
roi_sizes_um2 (89,) (float64) (Dataset)
|
| 160 |
+
session_info/ (Group)
|
| 161 |
+
presentation_sequence/ (Group)
|
| 162 |
+
absolute_start_time (2,) (object) (Dataset)
|
| 163 |
+
id (2,) (int64) (Dataset)
|
| 164 |
+
presentation_order (2,) (int64) (Dataset)
|
| 165 |
+
relative_start_time (2,) (float64) (Dataset)
|
| 166 |
+
stimulus_condition (2,) (object) (Dataset)
|
| 167 |
+
spatial/ (Group)
|
| 168 |
+
spatial_locations/ (Group)
|
| 169 |
+
field_temporal_nasal_pos_um (89,) (float64) (Dataset)
|
| 170 |
+
field_ventral_dorsal_pos_um (89,) (float64) (Dataset)
|
| 171 |
+
id (89,) (int64) (Dataset)
|
| 172 |
+
roi_id (89,) (int64) (Dataset)
|
| 173 |
+
roi_table_link (89,) (int64) (Dataset)
|
| 174 |
+
temporal_nasal_pos_um (89,) (float64) (Dataset)
|
| 175 |
+
ventral_dorsal_pos_um (89,) (float64) (Dataset)
|
| 176 |
+
session_description (object) (Dataset)
|
| 177 |
+
session_start_time (object) (Dataset)
|
| 178 |
+
specifications/ (Group)
|
| 179 |
+
core/ (Group)
|
| 180 |
+
2.8.0/ (Group)
|
| 181 |
+
namespace (object) (Dataset)
|
| 182 |
+
nwb.base (object) (Dataset)
|
| 183 |
+
nwb.behavior (object) (Dataset)
|
| 184 |
+
nwb.device (object) (Dataset)
|
| 185 |
+
nwb.ecephys (object) (Dataset)
|
| 186 |
+
nwb.epoch (object) (Dataset)
|
| 187 |
+
nwb.file (object) (Dataset)
|
| 188 |
+
nwb.icephys (object) (Dataset)
|
| 189 |
+
nwb.image (object) (Dataset)
|
| 190 |
+
nwb.misc (object) (Dataset)
|
| 191 |
+
nwb.ogen (object) (Dataset)
|
| 192 |
+
nwb.ophys (object) (Dataset)
|
| 193 |
+
nwb.retinotopy (object) (Dataset)
|
| 194 |
+
experiment-metadata/ (Group)
|
| 195 |
+
0.1.0/ (Group)
|
| 196 |
+
experiment_metadata.extensions (object) (Dataset)
|
| 197 |
+
namespace (object) (Dataset)
|
| 198 |
+
hdmf-common/ (Group)
|
| 199 |
+
1.8.0/ (Group)
|
| 200 |
+
base (object) (Dataset)
|
| 201 |
+
namespace (object) (Dataset)
|
| 202 |
+
sparse (object) (Dataset)
|
| 203 |
+
table (object) (Dataset)
|
| 204 |
+
hdmf-experimental/ (Group)
|
| 205 |
+
0.5.0/ (Group)
|
| 206 |
+
experimental (object) (Dataset)
|
| 207 |
+
namespace (object) (Dataset)
|
| 208 |
+
resources (object) (Dataset)
|
| 209 |
+
stimulus/ (Group)
|
| 210 |
+
presentation/ (Group)
|
| 211 |
+
chirp_stimulus/ (Group)
|
| 212 |
+
data (0, 0, 0) (uint8) (Dataset)
|
| 213 |
+
dimension (2,) (int64) (Dataset)
|
| 214 |
+
external_file (1,) (object) (Dataset)
|
| 215 |
+
format (object) (Dataset)
|
| 216 |
+
starting_time (float64) (Dataset)
|
| 217 |
+
movingbar_stimulus/ (Group)
|
| 218 |
+
data (0, 0, 0) (uint8) (Dataset)
|
| 219 |
+
dimension (2,) (int64) (Dataset)
|
| 220 |
+
external_file (1,) (object) (Dataset)
|
| 221 |
+
format (object) (Dataset)
|
| 222 |
+
starting_time (float64) (Dataset)
|
| 223 |
+
templates/ (Group)
|
| 224 |
+
timestamps_reference_time (object) (Dataset)
|
session_Experimenter_2_2022-09-21/experiment_1_RR/field_RGC5_structure.txt
ADDED
|
@@ -0,0 +1,224 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
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|
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|
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|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
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|
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|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
|
| 1 |
+
NWB File Structure Report
|
| 2 |
+
========================
|
| 3 |
+
File: field_RGC5.nwb
|
| 4 |
+
Size: 31.94 MB
|
| 5 |
+
Generated: 2025-10-31 16:16:09
|
| 6 |
+
|
| 7 |
+
Structure:
|
| 8 |
+
----------
|
| 9 |
+
acquisition/ (Group)
|
| 10 |
+
TwoPhotonSeries_Cond_control_chirp_Pres_1/ (Group)
|
| 11 |
+
data (1597, 64, 64) (uint16) (Dataset)
|
| 12 |
+
imaging_plane/ (Group)
|
| 13 |
+
OpticalChannel/ (Group)
|
| 14 |
+
description (object) (Dataset)
|
| 15 |
+
emission_lambda (float64) (Dataset)
|
| 16 |
+
description (object) (Dataset)
|
| 17 |
+
device/ (Group)
|
| 18 |
+
excitation_lambda (float64) (Dataset)
|
| 19 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 20 |
+
imaging_rate (float64) (Dataset)
|
| 21 |
+
indicator (object) (Dataset)
|
| 22 |
+
location (object) (Dataset)
|
| 23 |
+
timestamps (1597,) (float64) (Dataset)
|
| 24 |
+
TwoPhotonSeries_Cond_control_movingbar_Pres_1/ (Group)
|
| 25 |
+
data (1594, 64, 64) (uint16) (Dataset)
|
| 26 |
+
imaging_plane/ (Group)
|
| 27 |
+
OpticalChannel/ (Group)
|
| 28 |
+
description (object) (Dataset)
|
| 29 |
+
emission_lambda (float64) (Dataset)
|
| 30 |
+
description (object) (Dataset)
|
| 31 |
+
device/ (Group)
|
| 32 |
+
excitation_lambda (float64) (Dataset)
|
| 33 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 34 |
+
imaging_rate (float64) (Dataset)
|
| 35 |
+
indicator (object) (Dataset)
|
| 36 |
+
location (object) (Dataset)
|
| 37 |
+
timestamps (1594,) (float64) (Dataset)
|
| 38 |
+
analysis/ (Group)
|
| 39 |
+
file_create_date (1,) (object) (Dataset)
|
| 40 |
+
general/ (Group)
|
| 41 |
+
devices/ (Group)
|
| 42 |
+
Microscope/ (Group)
|
| 43 |
+
experiment_metadata/ (Group)
|
| 44 |
+
experiment_number (object) (Dataset)
|
| 45 |
+
eye (object) (Dataset)
|
| 46 |
+
preparation_orientation (object) (Dataset)
|
| 47 |
+
setup_id (object) (Dataset)
|
| 48 |
+
experimenter (1,) (object) (Dataset)
|
| 49 |
+
institution (object) (Dataset)
|
| 50 |
+
lab (object) (Dataset)
|
| 51 |
+
optophysiology/ (Group)
|
| 52 |
+
ImagingPlane/ (Group)
|
| 53 |
+
OpticalChannel/ (Group)
|
| 54 |
+
description (object) (Dataset)
|
| 55 |
+
emission_lambda (float64) (Dataset)
|
| 56 |
+
description (object) (Dataset)
|
| 57 |
+
device/ (Group)
|
| 58 |
+
excitation_lambda (float64) (Dataset)
|
| 59 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 60 |
+
imaging_rate (float64) (Dataset)
|
| 61 |
+
indicator (object) (Dataset)
|
| 62 |
+
location (object) (Dataset)
|
| 63 |
+
related_publications (1,) (object) (Dataset)
|
| 64 |
+
subject/ (Group)
|
| 65 |
+
age (object) (Dataset)
|
| 66 |
+
date_of_birth (object) (Dataset)
|
| 67 |
+
genotype (object) (Dataset)
|
| 68 |
+
sex (object) (Dataset)
|
| 69 |
+
species (object) (Dataset)
|
| 70 |
+
identifier (object) (Dataset)
|
| 71 |
+
processing/ (Group)
|
| 72 |
+
Condition_control/ (Group)
|
| 73 |
+
cell_types/ (Group)
|
| 74 |
+
cluster_id (108,) (int64) (Dataset)
|
| 75 |
+
condition (108,) (object) (Dataset)
|
| 76 |
+
group_id (108,) (int64) (Dataset)
|
| 77 |
+
id (108,) (int64) (Dataset)
|
| 78 |
+
preproc_bar (108, 32) (float64) (Dataset)
|
| 79 |
+
preproc_chirp (108, 249) (float64) (Dataset)
|
| 80 |
+
prob_class (108,) (float64) (Dataset)
|
| 81 |
+
prob_cluster (108,) (float64) (Dataset)
|
| 82 |
+
prob_group (108,) (float64) (Dataset)
|
| 83 |
+
prob_supergroup (108,) (float64) (Dataset)
|
| 84 |
+
probs_per_cluster (108, 75) (float64) (Dataset)
|
| 85 |
+
roi_id (108,) (int64) (Dataset)
|
| 86 |
+
roi_table_link (108,) (int64) (Dataset)
|
| 87 |
+
supergroup (108,) (object) (Dataset)
|
| 88 |
+
chirp_60Hz_average/ (Group)
|
| 89 |
+
data (1982, 108) (float64) (Dataset)
|
| 90 |
+
timestamps (1982,) (float64) (Dataset)
|
| 91 |
+
chirp_8Hz_average/ (Group)
|
| 92 |
+
data (259, 108) (float64) (Dataset)
|
| 93 |
+
timestamps (259,) (float64) (Dataset)
|
| 94 |
+
chirp_features/ (Group)
|
| 95 |
+
chirp_on_off_index (108,) (float64) (Dataset)
|
| 96 |
+
chirp_pres_qidx (108,) (float64) (Dataset)
|
| 97 |
+
chirp_qidx (108,) (float64) (Dataset)
|
| 98 |
+
chirp_transience_index (108,) (float64) (Dataset)
|
| 99 |
+
id (108,) (int64) (Dataset)
|
| 100 |
+
roi_id (108,) (int64) (Dataset)
|
| 101 |
+
roi_table_link (108,) (int64) (Dataset)
|
| 102 |
+
chirp_preprocessed_traces/ (Group)
|
| 103 |
+
data (1597, 108) (float64) (Dataset)
|
| 104 |
+
timestamps (1597,) (float64) (Dataset)
|
| 105 |
+
chirp_snippets/ (Group)
|
| 106 |
+
data (259, 108, 5) (float64) (Dataset)
|
| 107 |
+
timestamps (259,) (float64) (Dataset)
|
| 108 |
+
chirp_snippets_t0/ (Group)
|
| 109 |
+
id (1,) (int64) (Dataset)
|
| 110 |
+
snippets_t0_array (1, 5, 108) (float64) (Dataset)
|
| 111 |
+
chirp_triggertimes_snippets/ (Group)
|
| 112 |
+
data (2, 108, 5) (float64) (Dataset)
|
| 113 |
+
starting_time (float64) (Dataset)
|
| 114 |
+
movingbar_features/ (Group)
|
| 115 |
+
bar_ds_index (108,) (float64) (Dataset)
|
| 116 |
+
bar_ds_pvalue (108,) (float64) (Dataset)
|
| 117 |
+
bar_os_index (108,) (float64) (Dataset)
|
| 118 |
+
bar_os_pvalue (108,) (float64) (Dataset)
|
| 119 |
+
bar_pref_dir (108,) (float64) (Dataset)
|
| 120 |
+
bar_pref_or (108,) (float64) (Dataset)
|
| 121 |
+
bar_pres_qidx (108,) (float64) (Dataset)
|
| 122 |
+
bar_qidx (108,) (float64) (Dataset)
|
| 123 |
+
id (108,) (int64) (Dataset)
|
| 124 |
+
roi_id (108,) (int64) (Dataset)
|
| 125 |
+
roi_table_link (108,) (int64) (Dataset)
|
| 126 |
+
movingbar_preprocessed_traces/ (Group)
|
| 127 |
+
data (1594, 108) (float64) (Dataset)
|
| 128 |
+
timestamps (1594,) (float64) (Dataset)
|
| 129 |
+
movingbar_snippets/ (Group)
|
| 130 |
+
data (33, 108, 24) (float32) (Dataset)
|
| 131 |
+
timestamps (33,) (float64) (Dataset)
|
| 132 |
+
movingbar_snippets_t0/ (Group)
|
| 133 |
+
id (1,) (int64) (Dataset)
|
| 134 |
+
snippets_t0_array (1, 24, 108) (float64) (Dataset)
|
| 135 |
+
movingbar_triggertimes_snippets/ (Group)
|
| 136 |
+
data (1, 108, 24) (float32) (Dataset)
|
| 137 |
+
starting_time (float64) (Dataset)
|
| 138 |
+
rois/ (Group)
|
| 139 |
+
ImageSegmentation/ (Group)
|
| 140 |
+
ROI masks/ (Group)
|
| 141 |
+
id (108,) (int64) (Dataset)
|
| 142 |
+
image_mask (108, 64, 64) (bool) (Dataset)
|
| 143 |
+
imaging_plane/ (Group)
|
| 144 |
+
OpticalChannel/ (Group)
|
| 145 |
+
description (object) (Dataset)
|
| 146 |
+
emission_lambda (float64) (Dataset)
|
| 147 |
+
description (object) (Dataset)
|
| 148 |
+
device/ (Group)
|
| 149 |
+
excitation_lambda (float64) (Dataset)
|
| 150 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 151 |
+
imaging_rate (float64) (Dataset)
|
| 152 |
+
indicator (object) (Dataset)
|
| 153 |
+
location (object) (Dataset)
|
| 154 |
+
nxpix (108,) (int64) (Dataset)
|
| 155 |
+
nypix (108,) (int64) (Dataset)
|
| 156 |
+
reference_images/ (Group)
|
| 157 |
+
roi_ids (108,) (int64) (Dataset)
|
| 158 |
+
roi_sizes (108,) (int64) (Dataset)
|
| 159 |
+
roi_sizes_um2 (108,) (float64) (Dataset)
|
| 160 |
+
session_info/ (Group)
|
| 161 |
+
presentation_sequence/ (Group)
|
| 162 |
+
absolute_start_time (2,) (object) (Dataset)
|
| 163 |
+
id (2,) (int64) (Dataset)
|
| 164 |
+
presentation_order (2,) (int64) (Dataset)
|
| 165 |
+
relative_start_time (2,) (float64) (Dataset)
|
| 166 |
+
stimulus_condition (2,) (object) (Dataset)
|
| 167 |
+
spatial/ (Group)
|
| 168 |
+
spatial_locations/ (Group)
|
| 169 |
+
field_temporal_nasal_pos_um (108,) (float64) (Dataset)
|
| 170 |
+
field_ventral_dorsal_pos_um (108,) (float64) (Dataset)
|
| 171 |
+
id (108,) (int64) (Dataset)
|
| 172 |
+
roi_id (108,) (int64) (Dataset)
|
| 173 |
+
roi_table_link (108,) (int64) (Dataset)
|
| 174 |
+
temporal_nasal_pos_um (108,) (float64) (Dataset)
|
| 175 |
+
ventral_dorsal_pos_um (108,) (float64) (Dataset)
|
| 176 |
+
session_description (object) (Dataset)
|
| 177 |
+
session_start_time (object) (Dataset)
|
| 178 |
+
specifications/ (Group)
|
| 179 |
+
core/ (Group)
|
| 180 |
+
2.8.0/ (Group)
|
| 181 |
+
namespace (object) (Dataset)
|
| 182 |
+
nwb.base (object) (Dataset)
|
| 183 |
+
nwb.behavior (object) (Dataset)
|
| 184 |
+
nwb.device (object) (Dataset)
|
| 185 |
+
nwb.ecephys (object) (Dataset)
|
| 186 |
+
nwb.epoch (object) (Dataset)
|
| 187 |
+
nwb.file (object) (Dataset)
|
| 188 |
+
nwb.icephys (object) (Dataset)
|
| 189 |
+
nwb.image (object) (Dataset)
|
| 190 |
+
nwb.misc (object) (Dataset)
|
| 191 |
+
nwb.ogen (object) (Dataset)
|
| 192 |
+
nwb.ophys (object) (Dataset)
|
| 193 |
+
nwb.retinotopy (object) (Dataset)
|
| 194 |
+
experiment-metadata/ (Group)
|
| 195 |
+
0.1.0/ (Group)
|
| 196 |
+
experiment_metadata.extensions (object) (Dataset)
|
| 197 |
+
namespace (object) (Dataset)
|
| 198 |
+
hdmf-common/ (Group)
|
| 199 |
+
1.8.0/ (Group)
|
| 200 |
+
base (object) (Dataset)
|
| 201 |
+
namespace (object) (Dataset)
|
| 202 |
+
sparse (object) (Dataset)
|
| 203 |
+
table (object) (Dataset)
|
| 204 |
+
hdmf-experimental/ (Group)
|
| 205 |
+
0.5.0/ (Group)
|
| 206 |
+
experimental (object) (Dataset)
|
| 207 |
+
namespace (object) (Dataset)
|
| 208 |
+
resources (object) (Dataset)
|
| 209 |
+
stimulus/ (Group)
|
| 210 |
+
presentation/ (Group)
|
| 211 |
+
chirp_stimulus/ (Group)
|
| 212 |
+
data (0, 0, 0) (uint8) (Dataset)
|
| 213 |
+
dimension (2,) (int64) (Dataset)
|
| 214 |
+
external_file (1,) (object) (Dataset)
|
| 215 |
+
format (object) (Dataset)
|
| 216 |
+
starting_time (float64) (Dataset)
|
| 217 |
+
movingbar_stimulus/ (Group)
|
| 218 |
+
data (0, 0, 0) (uint8) (Dataset)
|
| 219 |
+
dimension (2,) (int64) (Dataset)
|
| 220 |
+
external_file (1,) (object) (Dataset)
|
| 221 |
+
format (object) (Dataset)
|
| 222 |
+
starting_time (float64) (Dataset)
|
| 223 |
+
templates/ (Group)
|
| 224 |
+
timestamps_reference_time (object) (Dataset)
|
session_Experimenter_2_2022-09-21/experiment_1_RR/field_RGC6_structure.txt
ADDED
|
@@ -0,0 +1,224 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
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|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
NWB File Structure Report
|
| 2 |
+
========================
|
| 3 |
+
File: field_RGC6.nwb
|
| 4 |
+
Size: 23.86 MB
|
| 5 |
+
Generated: 2025-10-31 16:16:11
|
| 6 |
+
|
| 7 |
+
Structure:
|
| 8 |
+
----------
|
| 9 |
+
acquisition/ (Group)
|
| 10 |
+
TwoPhotonSeries_Cond_control_chirp_Pres_1/ (Group)
|
| 11 |
+
data (1543, 64, 64) (uint16) (Dataset)
|
| 12 |
+
imaging_plane/ (Group)
|
| 13 |
+
OpticalChannel/ (Group)
|
| 14 |
+
description (object) (Dataset)
|
| 15 |
+
emission_lambda (float64) (Dataset)
|
| 16 |
+
description (object) (Dataset)
|
| 17 |
+
device/ (Group)
|
| 18 |
+
excitation_lambda (float64) (Dataset)
|
| 19 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 20 |
+
imaging_rate (float64) (Dataset)
|
| 21 |
+
indicator (object) (Dataset)
|
| 22 |
+
location (object) (Dataset)
|
| 23 |
+
timestamps (1543,) (float64) (Dataset)
|
| 24 |
+
TwoPhotonSeries_Cond_control_movingbar_Pres_1/ (Group)
|
| 25 |
+
data (947, 64, 64) (uint16) (Dataset)
|
| 26 |
+
imaging_plane/ (Group)
|
| 27 |
+
OpticalChannel/ (Group)
|
| 28 |
+
description (object) (Dataset)
|
| 29 |
+
emission_lambda (float64) (Dataset)
|
| 30 |
+
description (object) (Dataset)
|
| 31 |
+
device/ (Group)
|
| 32 |
+
excitation_lambda (float64) (Dataset)
|
| 33 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 34 |
+
imaging_rate (float64) (Dataset)
|
| 35 |
+
indicator (object) (Dataset)
|
| 36 |
+
location (object) (Dataset)
|
| 37 |
+
timestamps (947,) (float64) (Dataset)
|
| 38 |
+
analysis/ (Group)
|
| 39 |
+
file_create_date (1,) (object) (Dataset)
|
| 40 |
+
general/ (Group)
|
| 41 |
+
devices/ (Group)
|
| 42 |
+
Microscope/ (Group)
|
| 43 |
+
experiment_metadata/ (Group)
|
| 44 |
+
experiment_number (object) (Dataset)
|
| 45 |
+
eye (object) (Dataset)
|
| 46 |
+
preparation_orientation (object) (Dataset)
|
| 47 |
+
setup_id (object) (Dataset)
|
| 48 |
+
experimenter (1,) (object) (Dataset)
|
| 49 |
+
institution (object) (Dataset)
|
| 50 |
+
lab (object) (Dataset)
|
| 51 |
+
optophysiology/ (Group)
|
| 52 |
+
ImagingPlane/ (Group)
|
| 53 |
+
OpticalChannel/ (Group)
|
| 54 |
+
description (object) (Dataset)
|
| 55 |
+
emission_lambda (float64) (Dataset)
|
| 56 |
+
description (object) (Dataset)
|
| 57 |
+
device/ (Group)
|
| 58 |
+
excitation_lambda (float64) (Dataset)
|
| 59 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 60 |
+
imaging_rate (float64) (Dataset)
|
| 61 |
+
indicator (object) (Dataset)
|
| 62 |
+
location (object) (Dataset)
|
| 63 |
+
related_publications (1,) (object) (Dataset)
|
| 64 |
+
subject/ (Group)
|
| 65 |
+
age (object) (Dataset)
|
| 66 |
+
date_of_birth (object) (Dataset)
|
| 67 |
+
genotype (object) (Dataset)
|
| 68 |
+
sex (object) (Dataset)
|
| 69 |
+
species (object) (Dataset)
|
| 70 |
+
identifier (object) (Dataset)
|
| 71 |
+
processing/ (Group)
|
| 72 |
+
Condition_control/ (Group)
|
| 73 |
+
cell_types/ (Group)
|
| 74 |
+
cluster_id (72,) (int64) (Dataset)
|
| 75 |
+
condition (72,) (object) (Dataset)
|
| 76 |
+
group_id (72,) (int64) (Dataset)
|
| 77 |
+
id (72,) (int64) (Dataset)
|
| 78 |
+
preproc_bar (72, 32) (float64) (Dataset)
|
| 79 |
+
preproc_chirp (72, 249) (float64) (Dataset)
|
| 80 |
+
prob_class (72,) (float64) (Dataset)
|
| 81 |
+
prob_cluster (72,) (float64) (Dataset)
|
| 82 |
+
prob_group (72,) (float64) (Dataset)
|
| 83 |
+
prob_supergroup (72,) (float64) (Dataset)
|
| 84 |
+
probs_per_cluster (72, 75) (float64) (Dataset)
|
| 85 |
+
roi_id (72,) (int64) (Dataset)
|
| 86 |
+
roi_table_link (72,) (int64) (Dataset)
|
| 87 |
+
supergroup (72,) (object) (Dataset)
|
| 88 |
+
chirp_60Hz_average/ (Group)
|
| 89 |
+
data (1982, 72) (float64) (Dataset)
|
| 90 |
+
timestamps (1982,) (float64) (Dataset)
|
| 91 |
+
chirp_8Hz_average/ (Group)
|
| 92 |
+
data (259, 72) (float64) (Dataset)
|
| 93 |
+
timestamps (259,) (float64) (Dataset)
|
| 94 |
+
chirp_features/ (Group)
|
| 95 |
+
chirp_on_off_index (72,) (float64) (Dataset)
|
| 96 |
+
chirp_pres_qidx (72,) (float64) (Dataset)
|
| 97 |
+
chirp_qidx (72,) (float64) (Dataset)
|
| 98 |
+
chirp_transience_index (72,) (float64) (Dataset)
|
| 99 |
+
id (72,) (int64) (Dataset)
|
| 100 |
+
roi_id (72,) (int64) (Dataset)
|
| 101 |
+
roi_table_link (72,) (int64) (Dataset)
|
| 102 |
+
chirp_preprocessed_traces/ (Group)
|
| 103 |
+
data (1543, 72) (float64) (Dataset)
|
| 104 |
+
timestamps (1543,) (float64) (Dataset)
|
| 105 |
+
chirp_snippets/ (Group)
|
| 106 |
+
data (259, 72, 5) (float64) (Dataset)
|
| 107 |
+
timestamps (259,) (float64) (Dataset)
|
| 108 |
+
chirp_snippets_t0/ (Group)
|
| 109 |
+
id (1,) (int64) (Dataset)
|
| 110 |
+
snippets_t0_array (1, 5, 72) (float64) (Dataset)
|
| 111 |
+
chirp_triggertimes_snippets/ (Group)
|
| 112 |
+
data (2, 72, 5) (float64) (Dataset)
|
| 113 |
+
starting_time (float64) (Dataset)
|
| 114 |
+
movingbar_features/ (Group)
|
| 115 |
+
bar_ds_index (72,) (float64) (Dataset)
|
| 116 |
+
bar_ds_pvalue (72,) (float64) (Dataset)
|
| 117 |
+
bar_os_index (72,) (float64) (Dataset)
|
| 118 |
+
bar_os_pvalue (72,) (float64) (Dataset)
|
| 119 |
+
bar_pref_dir (72,) (float64) (Dataset)
|
| 120 |
+
bar_pref_or (72,) (float64) (Dataset)
|
| 121 |
+
bar_pres_qidx (72,) (float64) (Dataset)
|
| 122 |
+
bar_qidx (72,) (float64) (Dataset)
|
| 123 |
+
id (72,) (int64) (Dataset)
|
| 124 |
+
roi_id (72,) (int64) (Dataset)
|
| 125 |
+
roi_table_link (72,) (int64) (Dataset)
|
| 126 |
+
movingbar_preprocessed_traces/ (Group)
|
| 127 |
+
data (947, 72) (float64) (Dataset)
|
| 128 |
+
timestamps (947,) (float64) (Dataset)
|
| 129 |
+
movingbar_snippets/ (Group)
|
| 130 |
+
data (33, 72, 24) (float32) (Dataset)
|
| 131 |
+
timestamps (33,) (float64) (Dataset)
|
| 132 |
+
movingbar_snippets_t0/ (Group)
|
| 133 |
+
id (1,) (int64) (Dataset)
|
| 134 |
+
snippets_t0_array (1, 24, 72) (float64) (Dataset)
|
| 135 |
+
movingbar_triggertimes_snippets/ (Group)
|
| 136 |
+
data (1, 72, 24) (float32) (Dataset)
|
| 137 |
+
starting_time (float64) (Dataset)
|
| 138 |
+
rois/ (Group)
|
| 139 |
+
ImageSegmentation/ (Group)
|
| 140 |
+
ROI masks/ (Group)
|
| 141 |
+
id (72,) (int64) (Dataset)
|
| 142 |
+
image_mask (72, 64, 64) (bool) (Dataset)
|
| 143 |
+
imaging_plane/ (Group)
|
| 144 |
+
OpticalChannel/ (Group)
|
| 145 |
+
description (object) (Dataset)
|
| 146 |
+
emission_lambda (float64) (Dataset)
|
| 147 |
+
description (object) (Dataset)
|
| 148 |
+
device/ (Group)
|
| 149 |
+
excitation_lambda (float64) (Dataset)
|
| 150 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 151 |
+
imaging_rate (float64) (Dataset)
|
| 152 |
+
indicator (object) (Dataset)
|
| 153 |
+
location (object) (Dataset)
|
| 154 |
+
nxpix (72,) (int64) (Dataset)
|
| 155 |
+
nypix (72,) (int64) (Dataset)
|
| 156 |
+
reference_images/ (Group)
|
| 157 |
+
roi_ids (72,) (int64) (Dataset)
|
| 158 |
+
roi_sizes (72,) (int64) (Dataset)
|
| 159 |
+
roi_sizes_um2 (72,) (float64) (Dataset)
|
| 160 |
+
session_info/ (Group)
|
| 161 |
+
presentation_sequence/ (Group)
|
| 162 |
+
absolute_start_time (2,) (object) (Dataset)
|
| 163 |
+
id (2,) (int64) (Dataset)
|
| 164 |
+
presentation_order (2,) (int64) (Dataset)
|
| 165 |
+
relative_start_time (2,) (float64) (Dataset)
|
| 166 |
+
stimulus_condition (2,) (object) (Dataset)
|
| 167 |
+
spatial/ (Group)
|
| 168 |
+
spatial_locations/ (Group)
|
| 169 |
+
field_temporal_nasal_pos_um (72,) (float64) (Dataset)
|
| 170 |
+
field_ventral_dorsal_pos_um (72,) (float64) (Dataset)
|
| 171 |
+
id (72,) (int64) (Dataset)
|
| 172 |
+
roi_id (72,) (int64) (Dataset)
|
| 173 |
+
roi_table_link (72,) (int64) (Dataset)
|
| 174 |
+
temporal_nasal_pos_um (72,) (float64) (Dataset)
|
| 175 |
+
ventral_dorsal_pos_um (72,) (float64) (Dataset)
|
| 176 |
+
session_description (object) (Dataset)
|
| 177 |
+
session_start_time (object) (Dataset)
|
| 178 |
+
specifications/ (Group)
|
| 179 |
+
core/ (Group)
|
| 180 |
+
2.8.0/ (Group)
|
| 181 |
+
namespace (object) (Dataset)
|
| 182 |
+
nwb.base (object) (Dataset)
|
| 183 |
+
nwb.behavior (object) (Dataset)
|
| 184 |
+
nwb.device (object) (Dataset)
|
| 185 |
+
nwb.ecephys (object) (Dataset)
|
| 186 |
+
nwb.epoch (object) (Dataset)
|
| 187 |
+
nwb.file (object) (Dataset)
|
| 188 |
+
nwb.icephys (object) (Dataset)
|
| 189 |
+
nwb.image (object) (Dataset)
|
| 190 |
+
nwb.misc (object) (Dataset)
|
| 191 |
+
nwb.ogen (object) (Dataset)
|
| 192 |
+
nwb.ophys (object) (Dataset)
|
| 193 |
+
nwb.retinotopy (object) (Dataset)
|
| 194 |
+
experiment-metadata/ (Group)
|
| 195 |
+
0.1.0/ (Group)
|
| 196 |
+
experiment_metadata.extensions (object) (Dataset)
|
| 197 |
+
namespace (object) (Dataset)
|
| 198 |
+
hdmf-common/ (Group)
|
| 199 |
+
1.8.0/ (Group)
|
| 200 |
+
base (object) (Dataset)
|
| 201 |
+
namespace (object) (Dataset)
|
| 202 |
+
sparse (object) (Dataset)
|
| 203 |
+
table (object) (Dataset)
|
| 204 |
+
hdmf-experimental/ (Group)
|
| 205 |
+
0.5.0/ (Group)
|
| 206 |
+
experimental (object) (Dataset)
|
| 207 |
+
namespace (object) (Dataset)
|
| 208 |
+
resources (object) (Dataset)
|
| 209 |
+
stimulus/ (Group)
|
| 210 |
+
presentation/ (Group)
|
| 211 |
+
chirp_stimulus/ (Group)
|
| 212 |
+
data (0, 0, 0) (uint8) (Dataset)
|
| 213 |
+
dimension (2,) (int64) (Dataset)
|
| 214 |
+
external_file (1,) (object) (Dataset)
|
| 215 |
+
format (object) (Dataset)
|
| 216 |
+
starting_time (float64) (Dataset)
|
| 217 |
+
movingbar_stimulus/ (Group)
|
| 218 |
+
data (0, 0, 0) (uint8) (Dataset)
|
| 219 |
+
dimension (2,) (int64) (Dataset)
|
| 220 |
+
external_file (1,) (object) (Dataset)
|
| 221 |
+
format (object) (Dataset)
|
| 222 |
+
starting_time (float64) (Dataset)
|
| 223 |
+
templates/ (Group)
|
| 224 |
+
timestamps_reference_time (object) (Dataset)
|
session_Experimenter_2_2022-09-21/experiment_1_RR/field_RGC7_structure.txt
ADDED
|
@@ -0,0 +1,224 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
NWB File Structure Report
|
| 2 |
+
========================
|
| 3 |
+
File: field_RGC7.nwb
|
| 4 |
+
Size: 24.15 MB
|
| 5 |
+
Generated: 2025-10-31 16:16:13
|
| 6 |
+
|
| 7 |
+
Structure:
|
| 8 |
+
----------
|
| 9 |
+
acquisition/ (Group)
|
| 10 |
+
TwoPhotonSeries_Cond_control_chirp_Pres_1/ (Group)
|
| 11 |
+
data (1453, 64, 64) (uint16) (Dataset)
|
| 12 |
+
imaging_plane/ (Group)
|
| 13 |
+
OpticalChannel/ (Group)
|
| 14 |
+
description (object) (Dataset)
|
| 15 |
+
emission_lambda (float64) (Dataset)
|
| 16 |
+
description (object) (Dataset)
|
| 17 |
+
device/ (Group)
|
| 18 |
+
excitation_lambda (float64) (Dataset)
|
| 19 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 20 |
+
imaging_rate (float64) (Dataset)
|
| 21 |
+
indicator (object) (Dataset)
|
| 22 |
+
location (object) (Dataset)
|
| 23 |
+
timestamps (1453,) (float64) (Dataset)
|
| 24 |
+
TwoPhotonSeries_Cond_control_movingbar_Pres_1/ (Group)
|
| 25 |
+
data (1135, 64, 64) (uint16) (Dataset)
|
| 26 |
+
imaging_plane/ (Group)
|
| 27 |
+
OpticalChannel/ (Group)
|
| 28 |
+
description (object) (Dataset)
|
| 29 |
+
emission_lambda (float64) (Dataset)
|
| 30 |
+
description (object) (Dataset)
|
| 31 |
+
device/ (Group)
|
| 32 |
+
excitation_lambda (float64) (Dataset)
|
| 33 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 34 |
+
imaging_rate (float64) (Dataset)
|
| 35 |
+
indicator (object) (Dataset)
|
| 36 |
+
location (object) (Dataset)
|
| 37 |
+
timestamps (1135,) (float64) (Dataset)
|
| 38 |
+
analysis/ (Group)
|
| 39 |
+
file_create_date (1,) (object) (Dataset)
|
| 40 |
+
general/ (Group)
|
| 41 |
+
devices/ (Group)
|
| 42 |
+
Microscope/ (Group)
|
| 43 |
+
experiment_metadata/ (Group)
|
| 44 |
+
experiment_number (object) (Dataset)
|
| 45 |
+
eye (object) (Dataset)
|
| 46 |
+
preparation_orientation (object) (Dataset)
|
| 47 |
+
setup_id (object) (Dataset)
|
| 48 |
+
experimenter (1,) (object) (Dataset)
|
| 49 |
+
institution (object) (Dataset)
|
| 50 |
+
lab (object) (Dataset)
|
| 51 |
+
optophysiology/ (Group)
|
| 52 |
+
ImagingPlane/ (Group)
|
| 53 |
+
OpticalChannel/ (Group)
|
| 54 |
+
description (object) (Dataset)
|
| 55 |
+
emission_lambda (float64) (Dataset)
|
| 56 |
+
description (object) (Dataset)
|
| 57 |
+
device/ (Group)
|
| 58 |
+
excitation_lambda (float64) (Dataset)
|
| 59 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 60 |
+
imaging_rate (float64) (Dataset)
|
| 61 |
+
indicator (object) (Dataset)
|
| 62 |
+
location (object) (Dataset)
|
| 63 |
+
related_publications (1,) (object) (Dataset)
|
| 64 |
+
subject/ (Group)
|
| 65 |
+
age (object) (Dataset)
|
| 66 |
+
date_of_birth (object) (Dataset)
|
| 67 |
+
genotype (object) (Dataset)
|
| 68 |
+
sex (object) (Dataset)
|
| 69 |
+
species (object) (Dataset)
|
| 70 |
+
identifier (object) (Dataset)
|
| 71 |
+
processing/ (Group)
|
| 72 |
+
Condition_control/ (Group)
|
| 73 |
+
cell_types/ (Group)
|
| 74 |
+
cluster_id (63,) (int64) (Dataset)
|
| 75 |
+
condition (63,) (object) (Dataset)
|
| 76 |
+
group_id (63,) (int64) (Dataset)
|
| 77 |
+
id (63,) (int64) (Dataset)
|
| 78 |
+
preproc_bar (63, 32) (float64) (Dataset)
|
| 79 |
+
preproc_chirp (63, 249) (float64) (Dataset)
|
| 80 |
+
prob_class (63,) (float64) (Dataset)
|
| 81 |
+
prob_cluster (63,) (float64) (Dataset)
|
| 82 |
+
prob_group (63,) (float64) (Dataset)
|
| 83 |
+
prob_supergroup (63,) (float64) (Dataset)
|
| 84 |
+
probs_per_cluster (63, 75) (float64) (Dataset)
|
| 85 |
+
roi_id (63,) (int64) (Dataset)
|
| 86 |
+
roi_table_link (63,) (int64) (Dataset)
|
| 87 |
+
supergroup (63,) (object) (Dataset)
|
| 88 |
+
chirp_60Hz_average/ (Group)
|
| 89 |
+
data (1982, 63) (float64) (Dataset)
|
| 90 |
+
timestamps (1982,) (float64) (Dataset)
|
| 91 |
+
chirp_8Hz_average/ (Group)
|
| 92 |
+
data (259, 63) (float64) (Dataset)
|
| 93 |
+
timestamps (259,) (float64) (Dataset)
|
| 94 |
+
chirp_features/ (Group)
|
| 95 |
+
chirp_on_off_index (63,) (float64) (Dataset)
|
| 96 |
+
chirp_pres_qidx (63,) (float64) (Dataset)
|
| 97 |
+
chirp_qidx (63,) (float64) (Dataset)
|
| 98 |
+
chirp_transience_index (63,) (float64) (Dataset)
|
| 99 |
+
id (63,) (int64) (Dataset)
|
| 100 |
+
roi_id (63,) (int64) (Dataset)
|
| 101 |
+
roi_table_link (63,) (int64) (Dataset)
|
| 102 |
+
chirp_preprocessed_traces/ (Group)
|
| 103 |
+
data (1453, 63) (float64) (Dataset)
|
| 104 |
+
timestamps (1453,) (float64) (Dataset)
|
| 105 |
+
chirp_snippets/ (Group)
|
| 106 |
+
data (259, 63, 5) (float64) (Dataset)
|
| 107 |
+
timestamps (259,) (float64) (Dataset)
|
| 108 |
+
chirp_snippets_t0/ (Group)
|
| 109 |
+
id (1,) (int64) (Dataset)
|
| 110 |
+
snippets_t0_array (1, 5, 63) (float64) (Dataset)
|
| 111 |
+
chirp_triggertimes_snippets/ (Group)
|
| 112 |
+
data (2, 63, 5) (float64) (Dataset)
|
| 113 |
+
starting_time (float64) (Dataset)
|
| 114 |
+
movingbar_features/ (Group)
|
| 115 |
+
bar_ds_index (63,) (float64) (Dataset)
|
| 116 |
+
bar_ds_pvalue (63,) (float64) (Dataset)
|
| 117 |
+
bar_os_index (63,) (float64) (Dataset)
|
| 118 |
+
bar_os_pvalue (63,) (float64) (Dataset)
|
| 119 |
+
bar_pref_dir (63,) (float64) (Dataset)
|
| 120 |
+
bar_pref_or (63,) (float64) (Dataset)
|
| 121 |
+
bar_pres_qidx (63,) (float64) (Dataset)
|
| 122 |
+
bar_qidx (63,) (float64) (Dataset)
|
| 123 |
+
id (63,) (int64) (Dataset)
|
| 124 |
+
roi_id (63,) (int64) (Dataset)
|
| 125 |
+
roi_table_link (63,) (int64) (Dataset)
|
| 126 |
+
movingbar_preprocessed_traces/ (Group)
|
| 127 |
+
data (1135, 63) (float64) (Dataset)
|
| 128 |
+
timestamps (1135,) (float64) (Dataset)
|
| 129 |
+
movingbar_snippets/ (Group)
|
| 130 |
+
data (33, 63, 24) (float32) (Dataset)
|
| 131 |
+
timestamps (33,) (float64) (Dataset)
|
| 132 |
+
movingbar_snippets_t0/ (Group)
|
| 133 |
+
id (1,) (int64) (Dataset)
|
| 134 |
+
snippets_t0_array (1, 24, 63) (float64) (Dataset)
|
| 135 |
+
movingbar_triggertimes_snippets/ (Group)
|
| 136 |
+
data (1, 63, 24) (float32) (Dataset)
|
| 137 |
+
starting_time (float64) (Dataset)
|
| 138 |
+
rois/ (Group)
|
| 139 |
+
ImageSegmentation/ (Group)
|
| 140 |
+
ROI masks/ (Group)
|
| 141 |
+
id (63,) (int64) (Dataset)
|
| 142 |
+
image_mask (63, 64, 64) (bool) (Dataset)
|
| 143 |
+
imaging_plane/ (Group)
|
| 144 |
+
OpticalChannel/ (Group)
|
| 145 |
+
description (object) (Dataset)
|
| 146 |
+
emission_lambda (float64) (Dataset)
|
| 147 |
+
description (object) (Dataset)
|
| 148 |
+
device/ (Group)
|
| 149 |
+
excitation_lambda (float64) (Dataset)
|
| 150 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 151 |
+
imaging_rate (float64) (Dataset)
|
| 152 |
+
indicator (object) (Dataset)
|
| 153 |
+
location (object) (Dataset)
|
| 154 |
+
nxpix (63,) (int64) (Dataset)
|
| 155 |
+
nypix (63,) (int64) (Dataset)
|
| 156 |
+
reference_images/ (Group)
|
| 157 |
+
roi_ids (63,) (int64) (Dataset)
|
| 158 |
+
roi_sizes (63,) (int64) (Dataset)
|
| 159 |
+
roi_sizes_um2 (63,) (float64) (Dataset)
|
| 160 |
+
session_info/ (Group)
|
| 161 |
+
presentation_sequence/ (Group)
|
| 162 |
+
absolute_start_time (2,) (object) (Dataset)
|
| 163 |
+
id (2,) (int64) (Dataset)
|
| 164 |
+
presentation_order (2,) (int64) (Dataset)
|
| 165 |
+
relative_start_time (2,) (float64) (Dataset)
|
| 166 |
+
stimulus_condition (2,) (object) (Dataset)
|
| 167 |
+
spatial/ (Group)
|
| 168 |
+
spatial_locations/ (Group)
|
| 169 |
+
field_temporal_nasal_pos_um (63,) (float64) (Dataset)
|
| 170 |
+
field_ventral_dorsal_pos_um (63,) (float64) (Dataset)
|
| 171 |
+
id (63,) (int64) (Dataset)
|
| 172 |
+
roi_id (63,) (int64) (Dataset)
|
| 173 |
+
roi_table_link (63,) (int64) (Dataset)
|
| 174 |
+
temporal_nasal_pos_um (63,) (float64) (Dataset)
|
| 175 |
+
ventral_dorsal_pos_um (63,) (float64) (Dataset)
|
| 176 |
+
session_description (object) (Dataset)
|
| 177 |
+
session_start_time (object) (Dataset)
|
| 178 |
+
specifications/ (Group)
|
| 179 |
+
core/ (Group)
|
| 180 |
+
2.8.0/ (Group)
|
| 181 |
+
namespace (object) (Dataset)
|
| 182 |
+
nwb.base (object) (Dataset)
|
| 183 |
+
nwb.behavior (object) (Dataset)
|
| 184 |
+
nwb.device (object) (Dataset)
|
| 185 |
+
nwb.ecephys (object) (Dataset)
|
| 186 |
+
nwb.epoch (object) (Dataset)
|
| 187 |
+
nwb.file (object) (Dataset)
|
| 188 |
+
nwb.icephys (object) (Dataset)
|
| 189 |
+
nwb.image (object) (Dataset)
|
| 190 |
+
nwb.misc (object) (Dataset)
|
| 191 |
+
nwb.ogen (object) (Dataset)
|
| 192 |
+
nwb.ophys (object) (Dataset)
|
| 193 |
+
nwb.retinotopy (object) (Dataset)
|
| 194 |
+
experiment-metadata/ (Group)
|
| 195 |
+
0.1.0/ (Group)
|
| 196 |
+
experiment_metadata.extensions (object) (Dataset)
|
| 197 |
+
namespace (object) (Dataset)
|
| 198 |
+
hdmf-common/ (Group)
|
| 199 |
+
1.8.0/ (Group)
|
| 200 |
+
base (object) (Dataset)
|
| 201 |
+
namespace (object) (Dataset)
|
| 202 |
+
sparse (object) (Dataset)
|
| 203 |
+
table (object) (Dataset)
|
| 204 |
+
hdmf-experimental/ (Group)
|
| 205 |
+
0.5.0/ (Group)
|
| 206 |
+
experimental (object) (Dataset)
|
| 207 |
+
namespace (object) (Dataset)
|
| 208 |
+
resources (object) (Dataset)
|
| 209 |
+
stimulus/ (Group)
|
| 210 |
+
presentation/ (Group)
|
| 211 |
+
chirp_stimulus/ (Group)
|
| 212 |
+
data (0, 0, 0) (uint8) (Dataset)
|
| 213 |
+
dimension (2,) (int64) (Dataset)
|
| 214 |
+
external_file (1,) (object) (Dataset)
|
| 215 |
+
format (object) (Dataset)
|
| 216 |
+
starting_time (float64) (Dataset)
|
| 217 |
+
movingbar_stimulus/ (Group)
|
| 218 |
+
data (0, 0, 0) (uint8) (Dataset)
|
| 219 |
+
dimension (2,) (int64) (Dataset)
|
| 220 |
+
external_file (1,) (object) (Dataset)
|
| 221 |
+
format (object) (Dataset)
|
| 222 |
+
starting_time (float64) (Dataset)
|
| 223 |
+
templates/ (Group)
|
| 224 |
+
timestamps_reference_time (object) (Dataset)
|
session_Experimenter_2_2022-09-21/experiment_1_RR/field_RGC8_structure.txt
ADDED
|
@@ -0,0 +1,224 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
NWB File Structure Report
|
| 2 |
+
========================
|
| 3 |
+
File: field_RGC8.nwb
|
| 4 |
+
Size: 25.65 MB
|
| 5 |
+
Generated: 2025-10-31 16:16:16
|
| 6 |
+
|
| 7 |
+
Structure:
|
| 8 |
+
----------
|
| 9 |
+
acquisition/ (Group)
|
| 10 |
+
TwoPhotonSeries_Cond_control_chirp_Pres_1/ (Group)
|
| 11 |
+
data (1578, 64, 64) (uint16) (Dataset)
|
| 12 |
+
imaging_plane/ (Group)
|
| 13 |
+
OpticalChannel/ (Group)
|
| 14 |
+
description (object) (Dataset)
|
| 15 |
+
emission_lambda (float64) (Dataset)
|
| 16 |
+
description (object) (Dataset)
|
| 17 |
+
device/ (Group)
|
| 18 |
+
excitation_lambda (float64) (Dataset)
|
| 19 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 20 |
+
imaging_rate (float64) (Dataset)
|
| 21 |
+
indicator (object) (Dataset)
|
| 22 |
+
location (object) (Dataset)
|
| 23 |
+
timestamps (1578,) (float64) (Dataset)
|
| 24 |
+
TwoPhotonSeries_Cond_control_movingbar_Pres_1/ (Group)
|
| 25 |
+
data (1252, 64, 64) (uint16) (Dataset)
|
| 26 |
+
imaging_plane/ (Group)
|
| 27 |
+
OpticalChannel/ (Group)
|
| 28 |
+
description (object) (Dataset)
|
| 29 |
+
emission_lambda (float64) (Dataset)
|
| 30 |
+
description (object) (Dataset)
|
| 31 |
+
device/ (Group)
|
| 32 |
+
excitation_lambda (float64) (Dataset)
|
| 33 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 34 |
+
imaging_rate (float64) (Dataset)
|
| 35 |
+
indicator (object) (Dataset)
|
| 36 |
+
location (object) (Dataset)
|
| 37 |
+
timestamps (1252,) (float64) (Dataset)
|
| 38 |
+
analysis/ (Group)
|
| 39 |
+
file_create_date (1,) (object) (Dataset)
|
| 40 |
+
general/ (Group)
|
| 41 |
+
devices/ (Group)
|
| 42 |
+
Microscope/ (Group)
|
| 43 |
+
experiment_metadata/ (Group)
|
| 44 |
+
experiment_number (object) (Dataset)
|
| 45 |
+
eye (object) (Dataset)
|
| 46 |
+
preparation_orientation (object) (Dataset)
|
| 47 |
+
setup_id (object) (Dataset)
|
| 48 |
+
experimenter (1,) (object) (Dataset)
|
| 49 |
+
institution (object) (Dataset)
|
| 50 |
+
lab (object) (Dataset)
|
| 51 |
+
optophysiology/ (Group)
|
| 52 |
+
ImagingPlane/ (Group)
|
| 53 |
+
OpticalChannel/ (Group)
|
| 54 |
+
description (object) (Dataset)
|
| 55 |
+
emission_lambda (float64) (Dataset)
|
| 56 |
+
description (object) (Dataset)
|
| 57 |
+
device/ (Group)
|
| 58 |
+
excitation_lambda (float64) (Dataset)
|
| 59 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 60 |
+
imaging_rate (float64) (Dataset)
|
| 61 |
+
indicator (object) (Dataset)
|
| 62 |
+
location (object) (Dataset)
|
| 63 |
+
related_publications (1,) (object) (Dataset)
|
| 64 |
+
subject/ (Group)
|
| 65 |
+
age (object) (Dataset)
|
| 66 |
+
date_of_birth (object) (Dataset)
|
| 67 |
+
genotype (object) (Dataset)
|
| 68 |
+
sex (object) (Dataset)
|
| 69 |
+
species (object) (Dataset)
|
| 70 |
+
identifier (object) (Dataset)
|
| 71 |
+
processing/ (Group)
|
| 72 |
+
Condition_control/ (Group)
|
| 73 |
+
cell_types/ (Group)
|
| 74 |
+
cluster_id (74,) (int64) (Dataset)
|
| 75 |
+
condition (74,) (object) (Dataset)
|
| 76 |
+
group_id (74,) (int64) (Dataset)
|
| 77 |
+
id (74,) (int64) (Dataset)
|
| 78 |
+
preproc_bar (74, 32) (float64) (Dataset)
|
| 79 |
+
preproc_chirp (74, 249) (float64) (Dataset)
|
| 80 |
+
prob_class (74,) (float64) (Dataset)
|
| 81 |
+
prob_cluster (74,) (float64) (Dataset)
|
| 82 |
+
prob_group (74,) (float64) (Dataset)
|
| 83 |
+
prob_supergroup (74,) (float64) (Dataset)
|
| 84 |
+
probs_per_cluster (74, 75) (float64) (Dataset)
|
| 85 |
+
roi_id (74,) (int64) (Dataset)
|
| 86 |
+
roi_table_link (74,) (int64) (Dataset)
|
| 87 |
+
supergroup (74,) (object) (Dataset)
|
| 88 |
+
chirp_60Hz_average/ (Group)
|
| 89 |
+
data (1982, 74) (float64) (Dataset)
|
| 90 |
+
timestamps (1982,) (float64) (Dataset)
|
| 91 |
+
chirp_8Hz_average/ (Group)
|
| 92 |
+
data (259, 74) (float64) (Dataset)
|
| 93 |
+
timestamps (259,) (float64) (Dataset)
|
| 94 |
+
chirp_features/ (Group)
|
| 95 |
+
chirp_on_off_index (74,) (float64) (Dataset)
|
| 96 |
+
chirp_pres_qidx (74,) (float64) (Dataset)
|
| 97 |
+
chirp_qidx (74,) (float64) (Dataset)
|
| 98 |
+
chirp_transience_index (74,) (float64) (Dataset)
|
| 99 |
+
id (74,) (int64) (Dataset)
|
| 100 |
+
roi_id (74,) (int64) (Dataset)
|
| 101 |
+
roi_table_link (74,) (int64) (Dataset)
|
| 102 |
+
chirp_preprocessed_traces/ (Group)
|
| 103 |
+
data (1578, 74) (float32) (Dataset)
|
| 104 |
+
timestamps (1578,) (float64) (Dataset)
|
| 105 |
+
chirp_snippets/ (Group)
|
| 106 |
+
data (259, 74, 5) (float32) (Dataset)
|
| 107 |
+
timestamps (259,) (float64) (Dataset)
|
| 108 |
+
chirp_snippets_t0/ (Group)
|
| 109 |
+
id (1,) (int64) (Dataset)
|
| 110 |
+
snippets_t0_array (1, 5, 74) (float64) (Dataset)
|
| 111 |
+
chirp_triggertimes_snippets/ (Group)
|
| 112 |
+
data (2, 74, 5) (float32) (Dataset)
|
| 113 |
+
starting_time (float64) (Dataset)
|
| 114 |
+
movingbar_features/ (Group)
|
| 115 |
+
bar_ds_index (74,) (float64) (Dataset)
|
| 116 |
+
bar_ds_pvalue (74,) (float64) (Dataset)
|
| 117 |
+
bar_os_index (74,) (float64) (Dataset)
|
| 118 |
+
bar_os_pvalue (74,) (float64) (Dataset)
|
| 119 |
+
bar_pref_dir (74,) (float64) (Dataset)
|
| 120 |
+
bar_pref_or (74,) (float64) (Dataset)
|
| 121 |
+
bar_pres_qidx (74,) (float64) (Dataset)
|
| 122 |
+
bar_qidx (74,) (float64) (Dataset)
|
| 123 |
+
id (74,) (int64) (Dataset)
|
| 124 |
+
roi_id (74,) (int64) (Dataset)
|
| 125 |
+
roi_table_link (74,) (int64) (Dataset)
|
| 126 |
+
movingbar_preprocessed_traces/ (Group)
|
| 127 |
+
data (1252, 74) (float32) (Dataset)
|
| 128 |
+
timestamps (1252,) (float64) (Dataset)
|
| 129 |
+
movingbar_snippets/ (Group)
|
| 130 |
+
data (33, 74, 24) (float32) (Dataset)
|
| 131 |
+
timestamps (33,) (float64) (Dataset)
|
| 132 |
+
movingbar_snippets_t0/ (Group)
|
| 133 |
+
id (1,) (int64) (Dataset)
|
| 134 |
+
snippets_t0_array (1, 24, 74) (float64) (Dataset)
|
| 135 |
+
movingbar_triggertimes_snippets/ (Group)
|
| 136 |
+
data (1, 74, 24) (float32) (Dataset)
|
| 137 |
+
starting_time (float64) (Dataset)
|
| 138 |
+
rois/ (Group)
|
| 139 |
+
ImageSegmentation/ (Group)
|
| 140 |
+
ROI masks/ (Group)
|
| 141 |
+
id (74,) (int64) (Dataset)
|
| 142 |
+
image_mask (74, 64, 64) (bool) (Dataset)
|
| 143 |
+
imaging_plane/ (Group)
|
| 144 |
+
OpticalChannel/ (Group)
|
| 145 |
+
description (object) (Dataset)
|
| 146 |
+
emission_lambda (float64) (Dataset)
|
| 147 |
+
description (object) (Dataset)
|
| 148 |
+
device/ (Group)
|
| 149 |
+
excitation_lambda (float64) (Dataset)
|
| 150 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 151 |
+
imaging_rate (float64) (Dataset)
|
| 152 |
+
indicator (object) (Dataset)
|
| 153 |
+
location (object) (Dataset)
|
| 154 |
+
nxpix (74,) (int64) (Dataset)
|
| 155 |
+
nypix (74,) (int64) (Dataset)
|
| 156 |
+
reference_images/ (Group)
|
| 157 |
+
roi_ids (74,) (int64) (Dataset)
|
| 158 |
+
roi_sizes (74,) (int64) (Dataset)
|
| 159 |
+
roi_sizes_um2 (74,) (float64) (Dataset)
|
| 160 |
+
session_info/ (Group)
|
| 161 |
+
presentation_sequence/ (Group)
|
| 162 |
+
absolute_start_time (2,) (object) (Dataset)
|
| 163 |
+
id (2,) (int64) (Dataset)
|
| 164 |
+
presentation_order (2,) (int64) (Dataset)
|
| 165 |
+
relative_start_time (2,) (float64) (Dataset)
|
| 166 |
+
stimulus_condition (2,) (object) (Dataset)
|
| 167 |
+
spatial/ (Group)
|
| 168 |
+
spatial_locations/ (Group)
|
| 169 |
+
field_temporal_nasal_pos_um (74,) (float64) (Dataset)
|
| 170 |
+
field_ventral_dorsal_pos_um (74,) (float64) (Dataset)
|
| 171 |
+
id (74,) (int64) (Dataset)
|
| 172 |
+
roi_id (74,) (int64) (Dataset)
|
| 173 |
+
roi_table_link (74,) (int64) (Dataset)
|
| 174 |
+
temporal_nasal_pos_um (74,) (float64) (Dataset)
|
| 175 |
+
ventral_dorsal_pos_um (74,) (float64) (Dataset)
|
| 176 |
+
session_description (object) (Dataset)
|
| 177 |
+
session_start_time (object) (Dataset)
|
| 178 |
+
specifications/ (Group)
|
| 179 |
+
core/ (Group)
|
| 180 |
+
2.8.0/ (Group)
|
| 181 |
+
namespace (object) (Dataset)
|
| 182 |
+
nwb.base (object) (Dataset)
|
| 183 |
+
nwb.behavior (object) (Dataset)
|
| 184 |
+
nwb.device (object) (Dataset)
|
| 185 |
+
nwb.ecephys (object) (Dataset)
|
| 186 |
+
nwb.epoch (object) (Dataset)
|
| 187 |
+
nwb.file (object) (Dataset)
|
| 188 |
+
nwb.icephys (object) (Dataset)
|
| 189 |
+
nwb.image (object) (Dataset)
|
| 190 |
+
nwb.misc (object) (Dataset)
|
| 191 |
+
nwb.ogen (object) (Dataset)
|
| 192 |
+
nwb.ophys (object) (Dataset)
|
| 193 |
+
nwb.retinotopy (object) (Dataset)
|
| 194 |
+
experiment-metadata/ (Group)
|
| 195 |
+
0.1.0/ (Group)
|
| 196 |
+
experiment_metadata.extensions (object) (Dataset)
|
| 197 |
+
namespace (object) (Dataset)
|
| 198 |
+
hdmf-common/ (Group)
|
| 199 |
+
1.8.0/ (Group)
|
| 200 |
+
base (object) (Dataset)
|
| 201 |
+
namespace (object) (Dataset)
|
| 202 |
+
sparse (object) (Dataset)
|
| 203 |
+
table (object) (Dataset)
|
| 204 |
+
hdmf-experimental/ (Group)
|
| 205 |
+
0.5.0/ (Group)
|
| 206 |
+
experimental (object) (Dataset)
|
| 207 |
+
namespace (object) (Dataset)
|
| 208 |
+
resources (object) (Dataset)
|
| 209 |
+
stimulus/ (Group)
|
| 210 |
+
presentation/ (Group)
|
| 211 |
+
chirp_stimulus/ (Group)
|
| 212 |
+
data (0, 0, 0) (uint8) (Dataset)
|
| 213 |
+
dimension (2,) (int64) (Dataset)
|
| 214 |
+
external_file (1,) (object) (Dataset)
|
| 215 |
+
format (object) (Dataset)
|
| 216 |
+
starting_time (float64) (Dataset)
|
| 217 |
+
movingbar_stimulus/ (Group)
|
| 218 |
+
data (0, 0, 0) (uint8) (Dataset)
|
| 219 |
+
dimension (2,) (int64) (Dataset)
|
| 220 |
+
external_file (1,) (object) (Dataset)
|
| 221 |
+
format (object) (Dataset)
|
| 222 |
+
starting_time (float64) (Dataset)
|
| 223 |
+
templates/ (Group)
|
| 224 |
+
timestamps_reference_time (object) (Dataset)
|
session_Experimenter_2_2022-09-29/experiment_1_LR/field_RGC0_structure.txt
ADDED
|
@@ -0,0 +1,163 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
NWB File Structure Report
|
| 2 |
+
========================
|
| 3 |
+
File: field_RGC0.nwb
|
| 4 |
+
Size: 9.80 MB
|
| 5 |
+
Generated: 2025-10-31 16:16:30
|
| 6 |
+
|
| 7 |
+
Structure:
|
| 8 |
+
----------
|
| 9 |
+
acquisition/ (Group)
|
| 10 |
+
TwoPhotonSeries_Cond_control_movingbar_Pres_1/ (Group)
|
| 11 |
+
data (969, 64, 64) (uint16) (Dataset)
|
| 12 |
+
imaging_plane/ (Group)
|
| 13 |
+
OpticalChannel/ (Group)
|
| 14 |
+
description (object) (Dataset)
|
| 15 |
+
emission_lambda (float64) (Dataset)
|
| 16 |
+
description (object) (Dataset)
|
| 17 |
+
device/ (Group)
|
| 18 |
+
excitation_lambda (float64) (Dataset)
|
| 19 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 20 |
+
imaging_rate (float64) (Dataset)
|
| 21 |
+
indicator (object) (Dataset)
|
| 22 |
+
location (object) (Dataset)
|
| 23 |
+
timestamps (969,) (float64) (Dataset)
|
| 24 |
+
analysis/ (Group)
|
| 25 |
+
file_create_date (1,) (object) (Dataset)
|
| 26 |
+
general/ (Group)
|
| 27 |
+
devices/ (Group)
|
| 28 |
+
Microscope/ (Group)
|
| 29 |
+
experiment_metadata/ (Group)
|
| 30 |
+
experiment_number (object) (Dataset)
|
| 31 |
+
eye (object) (Dataset)
|
| 32 |
+
preparation_orientation (object) (Dataset)
|
| 33 |
+
setup_id (object) (Dataset)
|
| 34 |
+
experimenter (1,) (object) (Dataset)
|
| 35 |
+
institution (object) (Dataset)
|
| 36 |
+
lab (object) (Dataset)
|
| 37 |
+
optophysiology/ (Group)
|
| 38 |
+
ImagingPlane/ (Group)
|
| 39 |
+
OpticalChannel/ (Group)
|
| 40 |
+
description (object) (Dataset)
|
| 41 |
+
emission_lambda (float64) (Dataset)
|
| 42 |
+
description (object) (Dataset)
|
| 43 |
+
device/ (Group)
|
| 44 |
+
excitation_lambda (float64) (Dataset)
|
| 45 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 46 |
+
imaging_rate (float64) (Dataset)
|
| 47 |
+
indicator (object) (Dataset)
|
| 48 |
+
location (object) (Dataset)
|
| 49 |
+
related_publications (1,) (object) (Dataset)
|
| 50 |
+
subject/ (Group)
|
| 51 |
+
age (object) (Dataset)
|
| 52 |
+
date_of_birth (object) (Dataset)
|
| 53 |
+
genotype (object) (Dataset)
|
| 54 |
+
sex (object) (Dataset)
|
| 55 |
+
species (object) (Dataset)
|
| 56 |
+
identifier (object) (Dataset)
|
| 57 |
+
processing/ (Group)
|
| 58 |
+
Condition_control/ (Group)
|
| 59 |
+
movingbar_features/ (Group)
|
| 60 |
+
bar_ds_index (134,) (float64) (Dataset)
|
| 61 |
+
bar_ds_pvalue (134,) (float64) (Dataset)
|
| 62 |
+
bar_os_index (134,) (float64) (Dataset)
|
| 63 |
+
bar_os_pvalue (134,) (float64) (Dataset)
|
| 64 |
+
bar_pref_dir (134,) (float64) (Dataset)
|
| 65 |
+
bar_pref_or (134,) (float64) (Dataset)
|
| 66 |
+
bar_pres_qidx (134,) (float64) (Dataset)
|
| 67 |
+
bar_qidx (134,) (float64) (Dataset)
|
| 68 |
+
id (134,) (int64) (Dataset)
|
| 69 |
+
roi_id (134,) (int64) (Dataset)
|
| 70 |
+
roi_table_link (134,) (int64) (Dataset)
|
| 71 |
+
movingbar_preprocessed_traces/ (Group)
|
| 72 |
+
data (969, 134) (float64) (Dataset)
|
| 73 |
+
timestamps (969,) (float64) (Dataset)
|
| 74 |
+
movingbar_snippets/ (Group)
|
| 75 |
+
data (33, 134, 24) (float32) (Dataset)
|
| 76 |
+
timestamps (33,) (float64) (Dataset)
|
| 77 |
+
movingbar_snippets_t0/ (Group)
|
| 78 |
+
id (1,) (int64) (Dataset)
|
| 79 |
+
snippets_t0_array (1, 24, 134) (float64) (Dataset)
|
| 80 |
+
movingbar_triggertimes_snippets/ (Group)
|
| 81 |
+
data (1, 134, 24) (float32) (Dataset)
|
| 82 |
+
starting_time (float64) (Dataset)
|
| 83 |
+
rois/ (Group)
|
| 84 |
+
ImageSegmentation/ (Group)
|
| 85 |
+
ROI masks/ (Group)
|
| 86 |
+
id (134,) (int64) (Dataset)
|
| 87 |
+
image_mask (134, 64, 64) (bool) (Dataset)
|
| 88 |
+
imaging_plane/ (Group)
|
| 89 |
+
OpticalChannel/ (Group)
|
| 90 |
+
description (object) (Dataset)
|
| 91 |
+
emission_lambda (float64) (Dataset)
|
| 92 |
+
description (object) (Dataset)
|
| 93 |
+
device/ (Group)
|
| 94 |
+
excitation_lambda (float64) (Dataset)
|
| 95 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 96 |
+
imaging_rate (float64) (Dataset)
|
| 97 |
+
indicator (object) (Dataset)
|
| 98 |
+
location (object) (Dataset)
|
| 99 |
+
nxpix (134,) (int64) (Dataset)
|
| 100 |
+
nypix (134,) (int64) (Dataset)
|
| 101 |
+
reference_images/ (Group)
|
| 102 |
+
roi_ids (134,) (int64) (Dataset)
|
| 103 |
+
roi_sizes (134,) (int64) (Dataset)
|
| 104 |
+
roi_sizes_um2 (134,) (float64) (Dataset)
|
| 105 |
+
session_info/ (Group)
|
| 106 |
+
presentation_sequence/ (Group)
|
| 107 |
+
absolute_start_time (1,) (object) (Dataset)
|
| 108 |
+
id (1,) (int64) (Dataset)
|
| 109 |
+
presentation_order (1,) (int64) (Dataset)
|
| 110 |
+
relative_start_time (1,) (float64) (Dataset)
|
| 111 |
+
stimulus_condition (1,) (object) (Dataset)
|
| 112 |
+
spatial/ (Group)
|
| 113 |
+
spatial_locations/ (Group)
|
| 114 |
+
field_temporal_nasal_pos_um (134,) (float64) (Dataset)
|
| 115 |
+
field_ventral_dorsal_pos_um (134,) (float64) (Dataset)
|
| 116 |
+
id (134,) (int64) (Dataset)
|
| 117 |
+
roi_id (134,) (int64) (Dataset)
|
| 118 |
+
roi_table_link (134,) (int64) (Dataset)
|
| 119 |
+
temporal_nasal_pos_um (134,) (float64) (Dataset)
|
| 120 |
+
ventral_dorsal_pos_um (134,) (float64) (Dataset)
|
| 121 |
+
session_description (object) (Dataset)
|
| 122 |
+
session_start_time (object) (Dataset)
|
| 123 |
+
specifications/ (Group)
|
| 124 |
+
core/ (Group)
|
| 125 |
+
2.8.0/ (Group)
|
| 126 |
+
namespace (object) (Dataset)
|
| 127 |
+
nwb.base (object) (Dataset)
|
| 128 |
+
nwb.behavior (object) (Dataset)
|
| 129 |
+
nwb.device (object) (Dataset)
|
| 130 |
+
nwb.ecephys (object) (Dataset)
|
| 131 |
+
nwb.epoch (object) (Dataset)
|
| 132 |
+
nwb.file (object) (Dataset)
|
| 133 |
+
nwb.icephys (object) (Dataset)
|
| 134 |
+
nwb.image (object) (Dataset)
|
| 135 |
+
nwb.misc (object) (Dataset)
|
| 136 |
+
nwb.ogen (object) (Dataset)
|
| 137 |
+
nwb.ophys (object) (Dataset)
|
| 138 |
+
nwb.retinotopy (object) (Dataset)
|
| 139 |
+
experiment-metadata/ (Group)
|
| 140 |
+
0.1.0/ (Group)
|
| 141 |
+
experiment_metadata.extensions (object) (Dataset)
|
| 142 |
+
namespace (object) (Dataset)
|
| 143 |
+
hdmf-common/ (Group)
|
| 144 |
+
1.8.0/ (Group)
|
| 145 |
+
base (object) (Dataset)
|
| 146 |
+
namespace (object) (Dataset)
|
| 147 |
+
sparse (object) (Dataset)
|
| 148 |
+
table (object) (Dataset)
|
| 149 |
+
hdmf-experimental/ (Group)
|
| 150 |
+
0.5.0/ (Group)
|
| 151 |
+
experimental (object) (Dataset)
|
| 152 |
+
namespace (object) (Dataset)
|
| 153 |
+
resources (object) (Dataset)
|
| 154 |
+
stimulus/ (Group)
|
| 155 |
+
presentation/ (Group)
|
| 156 |
+
movingbar_stimulus/ (Group)
|
| 157 |
+
data (0, 0, 0) (uint8) (Dataset)
|
| 158 |
+
dimension (2,) (int64) (Dataset)
|
| 159 |
+
external_file (1,) (object) (Dataset)
|
| 160 |
+
format (object) (Dataset)
|
| 161 |
+
starting_time (float64) (Dataset)
|
| 162 |
+
templates/ (Group)
|
| 163 |
+
timestamps_reference_time (object) (Dataset)
|
session_Experimenter_2_2022-09-29/experiment_1_LR/field_RGC1_structure.txt
ADDED
|
@@ -0,0 +1,163 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
NWB File Structure Report
|
| 2 |
+
========================
|
| 3 |
+
File: field_RGC1.nwb
|
| 4 |
+
Size: 9.63 MB
|
| 5 |
+
Generated: 2025-10-31 16:16:32
|
| 6 |
+
|
| 7 |
+
Structure:
|
| 8 |
+
----------
|
| 9 |
+
acquisition/ (Group)
|
| 10 |
+
TwoPhotonSeries_Cond_control_movingbar_Pres_1/ (Group)
|
| 11 |
+
data (958, 64, 64) (uint16) (Dataset)
|
| 12 |
+
imaging_plane/ (Group)
|
| 13 |
+
OpticalChannel/ (Group)
|
| 14 |
+
description (object) (Dataset)
|
| 15 |
+
emission_lambda (float64) (Dataset)
|
| 16 |
+
description (object) (Dataset)
|
| 17 |
+
device/ (Group)
|
| 18 |
+
excitation_lambda (float64) (Dataset)
|
| 19 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 20 |
+
imaging_rate (float64) (Dataset)
|
| 21 |
+
indicator (object) (Dataset)
|
| 22 |
+
location (object) (Dataset)
|
| 23 |
+
timestamps (958,) (float64) (Dataset)
|
| 24 |
+
analysis/ (Group)
|
| 25 |
+
file_create_date (1,) (object) (Dataset)
|
| 26 |
+
general/ (Group)
|
| 27 |
+
devices/ (Group)
|
| 28 |
+
Microscope/ (Group)
|
| 29 |
+
experiment_metadata/ (Group)
|
| 30 |
+
experiment_number (object) (Dataset)
|
| 31 |
+
eye (object) (Dataset)
|
| 32 |
+
preparation_orientation (object) (Dataset)
|
| 33 |
+
setup_id (object) (Dataset)
|
| 34 |
+
experimenter (1,) (object) (Dataset)
|
| 35 |
+
institution (object) (Dataset)
|
| 36 |
+
lab (object) (Dataset)
|
| 37 |
+
optophysiology/ (Group)
|
| 38 |
+
ImagingPlane/ (Group)
|
| 39 |
+
OpticalChannel/ (Group)
|
| 40 |
+
description (object) (Dataset)
|
| 41 |
+
emission_lambda (float64) (Dataset)
|
| 42 |
+
description (object) (Dataset)
|
| 43 |
+
device/ (Group)
|
| 44 |
+
excitation_lambda (float64) (Dataset)
|
| 45 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 46 |
+
imaging_rate (float64) (Dataset)
|
| 47 |
+
indicator (object) (Dataset)
|
| 48 |
+
location (object) (Dataset)
|
| 49 |
+
related_publications (1,) (object) (Dataset)
|
| 50 |
+
subject/ (Group)
|
| 51 |
+
age (object) (Dataset)
|
| 52 |
+
date_of_birth (object) (Dataset)
|
| 53 |
+
genotype (object) (Dataset)
|
| 54 |
+
sex (object) (Dataset)
|
| 55 |
+
species (object) (Dataset)
|
| 56 |
+
identifier (object) (Dataset)
|
| 57 |
+
processing/ (Group)
|
| 58 |
+
Condition_control/ (Group)
|
| 59 |
+
movingbar_features/ (Group)
|
| 60 |
+
bar_ds_index (129,) (float64) (Dataset)
|
| 61 |
+
bar_ds_pvalue (129,) (float64) (Dataset)
|
| 62 |
+
bar_os_index (129,) (float64) (Dataset)
|
| 63 |
+
bar_os_pvalue (129,) (float64) (Dataset)
|
| 64 |
+
bar_pref_dir (129,) (float64) (Dataset)
|
| 65 |
+
bar_pref_or (129,) (float64) (Dataset)
|
| 66 |
+
bar_pres_qidx (129,) (float64) (Dataset)
|
| 67 |
+
bar_qidx (129,) (float64) (Dataset)
|
| 68 |
+
id (129,) (int64) (Dataset)
|
| 69 |
+
roi_id (129,) (int64) (Dataset)
|
| 70 |
+
roi_table_link (129,) (int64) (Dataset)
|
| 71 |
+
movingbar_preprocessed_traces/ (Group)
|
| 72 |
+
data (958, 129) (float64) (Dataset)
|
| 73 |
+
timestamps (958,) (float64) (Dataset)
|
| 74 |
+
movingbar_snippets/ (Group)
|
| 75 |
+
data (33, 129, 24) (float32) (Dataset)
|
| 76 |
+
timestamps (33,) (float64) (Dataset)
|
| 77 |
+
movingbar_snippets_t0/ (Group)
|
| 78 |
+
id (1,) (int64) (Dataset)
|
| 79 |
+
snippets_t0_array (1, 24, 129) (float64) (Dataset)
|
| 80 |
+
movingbar_triggertimes_snippets/ (Group)
|
| 81 |
+
data (1, 129, 24) (float32) (Dataset)
|
| 82 |
+
starting_time (float64) (Dataset)
|
| 83 |
+
rois/ (Group)
|
| 84 |
+
ImageSegmentation/ (Group)
|
| 85 |
+
ROI masks/ (Group)
|
| 86 |
+
id (129,) (int64) (Dataset)
|
| 87 |
+
image_mask (129, 64, 64) (bool) (Dataset)
|
| 88 |
+
imaging_plane/ (Group)
|
| 89 |
+
OpticalChannel/ (Group)
|
| 90 |
+
description (object) (Dataset)
|
| 91 |
+
emission_lambda (float64) (Dataset)
|
| 92 |
+
description (object) (Dataset)
|
| 93 |
+
device/ (Group)
|
| 94 |
+
excitation_lambda (float64) (Dataset)
|
| 95 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 96 |
+
imaging_rate (float64) (Dataset)
|
| 97 |
+
indicator (object) (Dataset)
|
| 98 |
+
location (object) (Dataset)
|
| 99 |
+
nxpix (129,) (int64) (Dataset)
|
| 100 |
+
nypix (129,) (int64) (Dataset)
|
| 101 |
+
reference_images/ (Group)
|
| 102 |
+
roi_ids (129,) (int64) (Dataset)
|
| 103 |
+
roi_sizes (129,) (int64) (Dataset)
|
| 104 |
+
roi_sizes_um2 (129,) (float64) (Dataset)
|
| 105 |
+
session_info/ (Group)
|
| 106 |
+
presentation_sequence/ (Group)
|
| 107 |
+
absolute_start_time (1,) (object) (Dataset)
|
| 108 |
+
id (1,) (int64) (Dataset)
|
| 109 |
+
presentation_order (1,) (int64) (Dataset)
|
| 110 |
+
relative_start_time (1,) (float64) (Dataset)
|
| 111 |
+
stimulus_condition (1,) (object) (Dataset)
|
| 112 |
+
spatial/ (Group)
|
| 113 |
+
spatial_locations/ (Group)
|
| 114 |
+
field_temporal_nasal_pos_um (129,) (float64) (Dataset)
|
| 115 |
+
field_ventral_dorsal_pos_um (129,) (float64) (Dataset)
|
| 116 |
+
id (129,) (int64) (Dataset)
|
| 117 |
+
roi_id (129,) (int64) (Dataset)
|
| 118 |
+
roi_table_link (129,) (int64) (Dataset)
|
| 119 |
+
temporal_nasal_pos_um (129,) (float64) (Dataset)
|
| 120 |
+
ventral_dorsal_pos_um (129,) (float64) (Dataset)
|
| 121 |
+
session_description (object) (Dataset)
|
| 122 |
+
session_start_time (object) (Dataset)
|
| 123 |
+
specifications/ (Group)
|
| 124 |
+
core/ (Group)
|
| 125 |
+
2.8.0/ (Group)
|
| 126 |
+
namespace (object) (Dataset)
|
| 127 |
+
nwb.base (object) (Dataset)
|
| 128 |
+
nwb.behavior (object) (Dataset)
|
| 129 |
+
nwb.device (object) (Dataset)
|
| 130 |
+
nwb.ecephys (object) (Dataset)
|
| 131 |
+
nwb.epoch (object) (Dataset)
|
| 132 |
+
nwb.file (object) (Dataset)
|
| 133 |
+
nwb.icephys (object) (Dataset)
|
| 134 |
+
nwb.image (object) (Dataset)
|
| 135 |
+
nwb.misc (object) (Dataset)
|
| 136 |
+
nwb.ogen (object) (Dataset)
|
| 137 |
+
nwb.ophys (object) (Dataset)
|
| 138 |
+
nwb.retinotopy (object) (Dataset)
|
| 139 |
+
experiment-metadata/ (Group)
|
| 140 |
+
0.1.0/ (Group)
|
| 141 |
+
experiment_metadata.extensions (object) (Dataset)
|
| 142 |
+
namespace (object) (Dataset)
|
| 143 |
+
hdmf-common/ (Group)
|
| 144 |
+
1.8.0/ (Group)
|
| 145 |
+
base (object) (Dataset)
|
| 146 |
+
namespace (object) (Dataset)
|
| 147 |
+
sparse (object) (Dataset)
|
| 148 |
+
table (object) (Dataset)
|
| 149 |
+
hdmf-experimental/ (Group)
|
| 150 |
+
0.5.0/ (Group)
|
| 151 |
+
experimental (object) (Dataset)
|
| 152 |
+
namespace (object) (Dataset)
|
| 153 |
+
resources (object) (Dataset)
|
| 154 |
+
stimulus/ (Group)
|
| 155 |
+
presentation/ (Group)
|
| 156 |
+
movingbar_stimulus/ (Group)
|
| 157 |
+
data (0, 0, 0) (uint8) (Dataset)
|
| 158 |
+
dimension (2,) (int64) (Dataset)
|
| 159 |
+
external_file (1,) (object) (Dataset)
|
| 160 |
+
format (object) (Dataset)
|
| 161 |
+
starting_time (float64) (Dataset)
|
| 162 |
+
templates/ (Group)
|
| 163 |
+
timestamps_reference_time (object) (Dataset)
|
session_Experimenter_2_2022-09-29/experiment_1_LR/field_RGC2_structure.txt
ADDED
|
@@ -0,0 +1,163 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
NWB File Structure Report
|
| 2 |
+
========================
|
| 3 |
+
File: field_RGC2.nwb
|
| 4 |
+
Size: 9.60 MB
|
| 5 |
+
Generated: 2025-10-31 16:16:33
|
| 6 |
+
|
| 7 |
+
Structure:
|
| 8 |
+
----------
|
| 9 |
+
acquisition/ (Group)
|
| 10 |
+
TwoPhotonSeries_Cond_control_movingbar_Pres_1/ (Group)
|
| 11 |
+
data (964, 64, 64) (uint16) (Dataset)
|
| 12 |
+
imaging_plane/ (Group)
|
| 13 |
+
OpticalChannel/ (Group)
|
| 14 |
+
description (object) (Dataset)
|
| 15 |
+
emission_lambda (float64) (Dataset)
|
| 16 |
+
description (object) (Dataset)
|
| 17 |
+
device/ (Group)
|
| 18 |
+
excitation_lambda (float64) (Dataset)
|
| 19 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 20 |
+
imaging_rate (float64) (Dataset)
|
| 21 |
+
indicator (object) (Dataset)
|
| 22 |
+
location (object) (Dataset)
|
| 23 |
+
timestamps (964,) (float64) (Dataset)
|
| 24 |
+
analysis/ (Group)
|
| 25 |
+
file_create_date (1,) (object) (Dataset)
|
| 26 |
+
general/ (Group)
|
| 27 |
+
devices/ (Group)
|
| 28 |
+
Microscope/ (Group)
|
| 29 |
+
experiment_metadata/ (Group)
|
| 30 |
+
experiment_number (object) (Dataset)
|
| 31 |
+
eye (object) (Dataset)
|
| 32 |
+
preparation_orientation (object) (Dataset)
|
| 33 |
+
setup_id (object) (Dataset)
|
| 34 |
+
experimenter (1,) (object) (Dataset)
|
| 35 |
+
institution (object) (Dataset)
|
| 36 |
+
lab (object) (Dataset)
|
| 37 |
+
optophysiology/ (Group)
|
| 38 |
+
ImagingPlane/ (Group)
|
| 39 |
+
OpticalChannel/ (Group)
|
| 40 |
+
description (object) (Dataset)
|
| 41 |
+
emission_lambda (float64) (Dataset)
|
| 42 |
+
description (object) (Dataset)
|
| 43 |
+
device/ (Group)
|
| 44 |
+
excitation_lambda (float64) (Dataset)
|
| 45 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 46 |
+
imaging_rate (float64) (Dataset)
|
| 47 |
+
indicator (object) (Dataset)
|
| 48 |
+
location (object) (Dataset)
|
| 49 |
+
related_publications (1,) (object) (Dataset)
|
| 50 |
+
subject/ (Group)
|
| 51 |
+
age (object) (Dataset)
|
| 52 |
+
date_of_birth (object) (Dataset)
|
| 53 |
+
genotype (object) (Dataset)
|
| 54 |
+
sex (object) (Dataset)
|
| 55 |
+
species (object) (Dataset)
|
| 56 |
+
identifier (object) (Dataset)
|
| 57 |
+
processing/ (Group)
|
| 58 |
+
Condition_control/ (Group)
|
| 59 |
+
movingbar_features/ (Group)
|
| 60 |
+
bar_ds_index (123,) (float64) (Dataset)
|
| 61 |
+
bar_ds_pvalue (123,) (float64) (Dataset)
|
| 62 |
+
bar_os_index (123,) (float64) (Dataset)
|
| 63 |
+
bar_os_pvalue (123,) (float64) (Dataset)
|
| 64 |
+
bar_pref_dir (123,) (float64) (Dataset)
|
| 65 |
+
bar_pref_or (123,) (float64) (Dataset)
|
| 66 |
+
bar_pres_qidx (123,) (float64) (Dataset)
|
| 67 |
+
bar_qidx (123,) (float64) (Dataset)
|
| 68 |
+
id (123,) (int64) (Dataset)
|
| 69 |
+
roi_id (123,) (int64) (Dataset)
|
| 70 |
+
roi_table_link (123,) (int64) (Dataset)
|
| 71 |
+
movingbar_preprocessed_traces/ (Group)
|
| 72 |
+
data (964, 123) (float64) (Dataset)
|
| 73 |
+
timestamps (964,) (float64) (Dataset)
|
| 74 |
+
movingbar_snippets/ (Group)
|
| 75 |
+
data (33, 123, 24) (float32) (Dataset)
|
| 76 |
+
timestamps (33,) (float64) (Dataset)
|
| 77 |
+
movingbar_snippets_t0/ (Group)
|
| 78 |
+
id (1,) (int64) (Dataset)
|
| 79 |
+
snippets_t0_array (1, 24, 123) (float64) (Dataset)
|
| 80 |
+
movingbar_triggertimes_snippets/ (Group)
|
| 81 |
+
data (1, 123, 24) (float32) (Dataset)
|
| 82 |
+
starting_time (float64) (Dataset)
|
| 83 |
+
rois/ (Group)
|
| 84 |
+
ImageSegmentation/ (Group)
|
| 85 |
+
ROI masks/ (Group)
|
| 86 |
+
id (123,) (int64) (Dataset)
|
| 87 |
+
image_mask (123, 64, 64) (bool) (Dataset)
|
| 88 |
+
imaging_plane/ (Group)
|
| 89 |
+
OpticalChannel/ (Group)
|
| 90 |
+
description (object) (Dataset)
|
| 91 |
+
emission_lambda (float64) (Dataset)
|
| 92 |
+
description (object) (Dataset)
|
| 93 |
+
device/ (Group)
|
| 94 |
+
excitation_lambda (float64) (Dataset)
|
| 95 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 96 |
+
imaging_rate (float64) (Dataset)
|
| 97 |
+
indicator (object) (Dataset)
|
| 98 |
+
location (object) (Dataset)
|
| 99 |
+
nxpix (123,) (int64) (Dataset)
|
| 100 |
+
nypix (123,) (int64) (Dataset)
|
| 101 |
+
reference_images/ (Group)
|
| 102 |
+
roi_ids (123,) (int64) (Dataset)
|
| 103 |
+
roi_sizes (123,) (int64) (Dataset)
|
| 104 |
+
roi_sizes_um2 (123,) (float64) (Dataset)
|
| 105 |
+
session_info/ (Group)
|
| 106 |
+
presentation_sequence/ (Group)
|
| 107 |
+
absolute_start_time (1,) (object) (Dataset)
|
| 108 |
+
id (1,) (int64) (Dataset)
|
| 109 |
+
presentation_order (1,) (int64) (Dataset)
|
| 110 |
+
relative_start_time (1,) (float64) (Dataset)
|
| 111 |
+
stimulus_condition (1,) (object) (Dataset)
|
| 112 |
+
spatial/ (Group)
|
| 113 |
+
spatial_locations/ (Group)
|
| 114 |
+
field_temporal_nasal_pos_um (123,) (float64) (Dataset)
|
| 115 |
+
field_ventral_dorsal_pos_um (123,) (float64) (Dataset)
|
| 116 |
+
id (123,) (int64) (Dataset)
|
| 117 |
+
roi_id (123,) (int64) (Dataset)
|
| 118 |
+
roi_table_link (123,) (int64) (Dataset)
|
| 119 |
+
temporal_nasal_pos_um (123,) (float64) (Dataset)
|
| 120 |
+
ventral_dorsal_pos_um (123,) (float64) (Dataset)
|
| 121 |
+
session_description (object) (Dataset)
|
| 122 |
+
session_start_time (object) (Dataset)
|
| 123 |
+
specifications/ (Group)
|
| 124 |
+
core/ (Group)
|
| 125 |
+
2.8.0/ (Group)
|
| 126 |
+
namespace (object) (Dataset)
|
| 127 |
+
nwb.base (object) (Dataset)
|
| 128 |
+
nwb.behavior (object) (Dataset)
|
| 129 |
+
nwb.device (object) (Dataset)
|
| 130 |
+
nwb.ecephys (object) (Dataset)
|
| 131 |
+
nwb.epoch (object) (Dataset)
|
| 132 |
+
nwb.file (object) (Dataset)
|
| 133 |
+
nwb.icephys (object) (Dataset)
|
| 134 |
+
nwb.image (object) (Dataset)
|
| 135 |
+
nwb.misc (object) (Dataset)
|
| 136 |
+
nwb.ogen (object) (Dataset)
|
| 137 |
+
nwb.ophys (object) (Dataset)
|
| 138 |
+
nwb.retinotopy (object) (Dataset)
|
| 139 |
+
experiment-metadata/ (Group)
|
| 140 |
+
0.1.0/ (Group)
|
| 141 |
+
experiment_metadata.extensions (object) (Dataset)
|
| 142 |
+
namespace (object) (Dataset)
|
| 143 |
+
hdmf-common/ (Group)
|
| 144 |
+
1.8.0/ (Group)
|
| 145 |
+
base (object) (Dataset)
|
| 146 |
+
namespace (object) (Dataset)
|
| 147 |
+
sparse (object) (Dataset)
|
| 148 |
+
table (object) (Dataset)
|
| 149 |
+
hdmf-experimental/ (Group)
|
| 150 |
+
0.5.0/ (Group)
|
| 151 |
+
experimental (object) (Dataset)
|
| 152 |
+
namespace (object) (Dataset)
|
| 153 |
+
resources (object) (Dataset)
|
| 154 |
+
stimulus/ (Group)
|
| 155 |
+
presentation/ (Group)
|
| 156 |
+
movingbar_stimulus/ (Group)
|
| 157 |
+
data (0, 0, 0) (uint8) (Dataset)
|
| 158 |
+
dimension (2,) (int64) (Dataset)
|
| 159 |
+
external_file (1,) (object) (Dataset)
|
| 160 |
+
format (object) (Dataset)
|
| 161 |
+
starting_time (float64) (Dataset)
|
| 162 |
+
templates/ (Group)
|
| 163 |
+
timestamps_reference_time (object) (Dataset)
|
session_Experimenter_2_2022-09-29/experiment_1_LR/field_RGC3_structure.txt
ADDED
|
@@ -0,0 +1,163 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
NWB File Structure Report
|
| 2 |
+
========================
|
| 3 |
+
File: field_RGC3.nwb
|
| 4 |
+
Size: 10.35 MB
|
| 5 |
+
Generated: 2025-10-31 16:16:35
|
| 6 |
+
|
| 7 |
+
Structure:
|
| 8 |
+
----------
|
| 9 |
+
acquisition/ (Group)
|
| 10 |
+
TwoPhotonSeries_Cond_control_movingbar_Pres_1/ (Group)
|
| 11 |
+
data (1144, 64, 64) (uint16) (Dataset)
|
| 12 |
+
imaging_plane/ (Group)
|
| 13 |
+
OpticalChannel/ (Group)
|
| 14 |
+
description (object) (Dataset)
|
| 15 |
+
emission_lambda (float64) (Dataset)
|
| 16 |
+
description (object) (Dataset)
|
| 17 |
+
device/ (Group)
|
| 18 |
+
excitation_lambda (float64) (Dataset)
|
| 19 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 20 |
+
imaging_rate (float64) (Dataset)
|
| 21 |
+
indicator (object) (Dataset)
|
| 22 |
+
location (object) (Dataset)
|
| 23 |
+
timestamps (1144,) (float64) (Dataset)
|
| 24 |
+
analysis/ (Group)
|
| 25 |
+
file_create_date (1,) (object) (Dataset)
|
| 26 |
+
general/ (Group)
|
| 27 |
+
devices/ (Group)
|
| 28 |
+
Microscope/ (Group)
|
| 29 |
+
experiment_metadata/ (Group)
|
| 30 |
+
experiment_number (object) (Dataset)
|
| 31 |
+
eye (object) (Dataset)
|
| 32 |
+
preparation_orientation (object) (Dataset)
|
| 33 |
+
setup_id (object) (Dataset)
|
| 34 |
+
experimenter (1,) (object) (Dataset)
|
| 35 |
+
institution (object) (Dataset)
|
| 36 |
+
lab (object) (Dataset)
|
| 37 |
+
optophysiology/ (Group)
|
| 38 |
+
ImagingPlane/ (Group)
|
| 39 |
+
OpticalChannel/ (Group)
|
| 40 |
+
description (object) (Dataset)
|
| 41 |
+
emission_lambda (float64) (Dataset)
|
| 42 |
+
description (object) (Dataset)
|
| 43 |
+
device/ (Group)
|
| 44 |
+
excitation_lambda (float64) (Dataset)
|
| 45 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 46 |
+
imaging_rate (float64) (Dataset)
|
| 47 |
+
indicator (object) (Dataset)
|
| 48 |
+
location (object) (Dataset)
|
| 49 |
+
related_publications (1,) (object) (Dataset)
|
| 50 |
+
subject/ (Group)
|
| 51 |
+
age (object) (Dataset)
|
| 52 |
+
date_of_birth (object) (Dataset)
|
| 53 |
+
genotype (object) (Dataset)
|
| 54 |
+
sex (object) (Dataset)
|
| 55 |
+
species (object) (Dataset)
|
| 56 |
+
identifier (object) (Dataset)
|
| 57 |
+
processing/ (Group)
|
| 58 |
+
Condition_control/ (Group)
|
| 59 |
+
movingbar_features/ (Group)
|
| 60 |
+
bar_ds_index (72,) (float64) (Dataset)
|
| 61 |
+
bar_ds_pvalue (72,) (float64) (Dataset)
|
| 62 |
+
bar_os_index (72,) (float64) (Dataset)
|
| 63 |
+
bar_os_pvalue (72,) (float64) (Dataset)
|
| 64 |
+
bar_pref_dir (72,) (float64) (Dataset)
|
| 65 |
+
bar_pref_or (72,) (float64) (Dataset)
|
| 66 |
+
bar_pres_qidx (72,) (float64) (Dataset)
|
| 67 |
+
bar_qidx (72,) (float64) (Dataset)
|
| 68 |
+
id (72,) (int64) (Dataset)
|
| 69 |
+
roi_id (72,) (int64) (Dataset)
|
| 70 |
+
roi_table_link (72,) (int64) (Dataset)
|
| 71 |
+
movingbar_preprocessed_traces/ (Group)
|
| 72 |
+
data (1144, 72) (float64) (Dataset)
|
| 73 |
+
timestamps (1144,) (float64) (Dataset)
|
| 74 |
+
movingbar_snippets/ (Group)
|
| 75 |
+
data (33, 72, 24) (float32) (Dataset)
|
| 76 |
+
timestamps (33,) (float64) (Dataset)
|
| 77 |
+
movingbar_snippets_t0/ (Group)
|
| 78 |
+
id (1,) (int64) (Dataset)
|
| 79 |
+
snippets_t0_array (1, 24, 72) (float64) (Dataset)
|
| 80 |
+
movingbar_triggertimes_snippets/ (Group)
|
| 81 |
+
data (1, 72, 24) (float32) (Dataset)
|
| 82 |
+
starting_time (float64) (Dataset)
|
| 83 |
+
rois/ (Group)
|
| 84 |
+
ImageSegmentation/ (Group)
|
| 85 |
+
ROI masks/ (Group)
|
| 86 |
+
id (72,) (int64) (Dataset)
|
| 87 |
+
image_mask (72, 64, 64) (bool) (Dataset)
|
| 88 |
+
imaging_plane/ (Group)
|
| 89 |
+
OpticalChannel/ (Group)
|
| 90 |
+
description (object) (Dataset)
|
| 91 |
+
emission_lambda (float64) (Dataset)
|
| 92 |
+
description (object) (Dataset)
|
| 93 |
+
device/ (Group)
|
| 94 |
+
excitation_lambda (float64) (Dataset)
|
| 95 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 96 |
+
imaging_rate (float64) (Dataset)
|
| 97 |
+
indicator (object) (Dataset)
|
| 98 |
+
location (object) (Dataset)
|
| 99 |
+
nxpix (72,) (int64) (Dataset)
|
| 100 |
+
nypix (72,) (int64) (Dataset)
|
| 101 |
+
reference_images/ (Group)
|
| 102 |
+
roi_ids (72,) (int64) (Dataset)
|
| 103 |
+
roi_sizes (72,) (int64) (Dataset)
|
| 104 |
+
roi_sizes_um2 (72,) (float64) (Dataset)
|
| 105 |
+
session_info/ (Group)
|
| 106 |
+
presentation_sequence/ (Group)
|
| 107 |
+
absolute_start_time (1,) (object) (Dataset)
|
| 108 |
+
id (1,) (int64) (Dataset)
|
| 109 |
+
presentation_order (1,) (int64) (Dataset)
|
| 110 |
+
relative_start_time (1,) (float64) (Dataset)
|
| 111 |
+
stimulus_condition (1,) (object) (Dataset)
|
| 112 |
+
spatial/ (Group)
|
| 113 |
+
spatial_locations/ (Group)
|
| 114 |
+
field_temporal_nasal_pos_um (72,) (float64) (Dataset)
|
| 115 |
+
field_ventral_dorsal_pos_um (72,) (float64) (Dataset)
|
| 116 |
+
id (72,) (int64) (Dataset)
|
| 117 |
+
roi_id (72,) (int64) (Dataset)
|
| 118 |
+
roi_table_link (72,) (int64) (Dataset)
|
| 119 |
+
temporal_nasal_pos_um (72,) (float64) (Dataset)
|
| 120 |
+
ventral_dorsal_pos_um (72,) (float64) (Dataset)
|
| 121 |
+
session_description (object) (Dataset)
|
| 122 |
+
session_start_time (object) (Dataset)
|
| 123 |
+
specifications/ (Group)
|
| 124 |
+
core/ (Group)
|
| 125 |
+
2.8.0/ (Group)
|
| 126 |
+
namespace (object) (Dataset)
|
| 127 |
+
nwb.base (object) (Dataset)
|
| 128 |
+
nwb.behavior (object) (Dataset)
|
| 129 |
+
nwb.device (object) (Dataset)
|
| 130 |
+
nwb.ecephys (object) (Dataset)
|
| 131 |
+
nwb.epoch (object) (Dataset)
|
| 132 |
+
nwb.file (object) (Dataset)
|
| 133 |
+
nwb.icephys (object) (Dataset)
|
| 134 |
+
nwb.image (object) (Dataset)
|
| 135 |
+
nwb.misc (object) (Dataset)
|
| 136 |
+
nwb.ogen (object) (Dataset)
|
| 137 |
+
nwb.ophys (object) (Dataset)
|
| 138 |
+
nwb.retinotopy (object) (Dataset)
|
| 139 |
+
experiment-metadata/ (Group)
|
| 140 |
+
0.1.0/ (Group)
|
| 141 |
+
experiment_metadata.extensions (object) (Dataset)
|
| 142 |
+
namespace (object) (Dataset)
|
| 143 |
+
hdmf-common/ (Group)
|
| 144 |
+
1.8.0/ (Group)
|
| 145 |
+
base (object) (Dataset)
|
| 146 |
+
namespace (object) (Dataset)
|
| 147 |
+
sparse (object) (Dataset)
|
| 148 |
+
table (object) (Dataset)
|
| 149 |
+
hdmf-experimental/ (Group)
|
| 150 |
+
0.5.0/ (Group)
|
| 151 |
+
experimental (object) (Dataset)
|
| 152 |
+
namespace (object) (Dataset)
|
| 153 |
+
resources (object) (Dataset)
|
| 154 |
+
stimulus/ (Group)
|
| 155 |
+
presentation/ (Group)
|
| 156 |
+
movingbar_stimulus/ (Group)
|
| 157 |
+
data (0, 0, 0) (uint8) (Dataset)
|
| 158 |
+
dimension (2,) (int64) (Dataset)
|
| 159 |
+
external_file (1,) (object) (Dataset)
|
| 160 |
+
format (object) (Dataset)
|
| 161 |
+
starting_time (float64) (Dataset)
|
| 162 |
+
templates/ (Group)
|
| 163 |
+
timestamps_reference_time (object) (Dataset)
|
session_Experimenter_2_2022-09-29/experiment_1_LR/field_RGC4_structure.txt
ADDED
|
@@ -0,0 +1,163 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
NWB File Structure Report
|
| 2 |
+
========================
|
| 3 |
+
File: field_RGC4.nwb
|
| 4 |
+
Size: 8.71 MB
|
| 5 |
+
Generated: 2025-10-31 16:16:36
|
| 6 |
+
|
| 7 |
+
Structure:
|
| 8 |
+
----------
|
| 9 |
+
acquisition/ (Group)
|
| 10 |
+
TwoPhotonSeries_Cond_control_movingbar_Pres_1/ (Group)
|
| 11 |
+
data (993, 64, 64) (uint16) (Dataset)
|
| 12 |
+
imaging_plane/ (Group)
|
| 13 |
+
OpticalChannel/ (Group)
|
| 14 |
+
description (object) (Dataset)
|
| 15 |
+
emission_lambda (float64) (Dataset)
|
| 16 |
+
description (object) (Dataset)
|
| 17 |
+
device/ (Group)
|
| 18 |
+
excitation_lambda (float64) (Dataset)
|
| 19 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 20 |
+
imaging_rate (float64) (Dataset)
|
| 21 |
+
indicator (object) (Dataset)
|
| 22 |
+
location (object) (Dataset)
|
| 23 |
+
timestamps (993,) (float64) (Dataset)
|
| 24 |
+
analysis/ (Group)
|
| 25 |
+
file_create_date (1,) (object) (Dataset)
|
| 26 |
+
general/ (Group)
|
| 27 |
+
devices/ (Group)
|
| 28 |
+
Microscope/ (Group)
|
| 29 |
+
experiment_metadata/ (Group)
|
| 30 |
+
experiment_number (object) (Dataset)
|
| 31 |
+
eye (object) (Dataset)
|
| 32 |
+
preparation_orientation (object) (Dataset)
|
| 33 |
+
setup_id (object) (Dataset)
|
| 34 |
+
experimenter (1,) (object) (Dataset)
|
| 35 |
+
institution (object) (Dataset)
|
| 36 |
+
lab (object) (Dataset)
|
| 37 |
+
optophysiology/ (Group)
|
| 38 |
+
ImagingPlane/ (Group)
|
| 39 |
+
OpticalChannel/ (Group)
|
| 40 |
+
description (object) (Dataset)
|
| 41 |
+
emission_lambda (float64) (Dataset)
|
| 42 |
+
description (object) (Dataset)
|
| 43 |
+
device/ (Group)
|
| 44 |
+
excitation_lambda (float64) (Dataset)
|
| 45 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 46 |
+
imaging_rate (float64) (Dataset)
|
| 47 |
+
indicator (object) (Dataset)
|
| 48 |
+
location (object) (Dataset)
|
| 49 |
+
related_publications (1,) (object) (Dataset)
|
| 50 |
+
subject/ (Group)
|
| 51 |
+
age (object) (Dataset)
|
| 52 |
+
date_of_birth (object) (Dataset)
|
| 53 |
+
genotype (object) (Dataset)
|
| 54 |
+
sex (object) (Dataset)
|
| 55 |
+
species (object) (Dataset)
|
| 56 |
+
identifier (object) (Dataset)
|
| 57 |
+
processing/ (Group)
|
| 58 |
+
Condition_control/ (Group)
|
| 59 |
+
movingbar_features/ (Group)
|
| 60 |
+
bar_ds_index (47,) (float64) (Dataset)
|
| 61 |
+
bar_ds_pvalue (47,) (float64) (Dataset)
|
| 62 |
+
bar_os_index (47,) (float64) (Dataset)
|
| 63 |
+
bar_os_pvalue (47,) (float64) (Dataset)
|
| 64 |
+
bar_pref_dir (47,) (float64) (Dataset)
|
| 65 |
+
bar_pref_or (47,) (float64) (Dataset)
|
| 66 |
+
bar_pres_qidx (47,) (float64) (Dataset)
|
| 67 |
+
bar_qidx (47,) (float64) (Dataset)
|
| 68 |
+
id (47,) (int64) (Dataset)
|
| 69 |
+
roi_id (47,) (int64) (Dataset)
|
| 70 |
+
roi_table_link (47,) (int64) (Dataset)
|
| 71 |
+
movingbar_preprocessed_traces/ (Group)
|
| 72 |
+
data (993, 47) (float64) (Dataset)
|
| 73 |
+
timestamps (993,) (float64) (Dataset)
|
| 74 |
+
movingbar_snippets/ (Group)
|
| 75 |
+
data (33, 47, 24) (float32) (Dataset)
|
| 76 |
+
timestamps (33,) (float64) (Dataset)
|
| 77 |
+
movingbar_snippets_t0/ (Group)
|
| 78 |
+
id (1,) (int64) (Dataset)
|
| 79 |
+
snippets_t0_array (1, 24, 47) (float64) (Dataset)
|
| 80 |
+
movingbar_triggertimes_snippets/ (Group)
|
| 81 |
+
data (1, 47, 24) (float32) (Dataset)
|
| 82 |
+
starting_time (float64) (Dataset)
|
| 83 |
+
rois/ (Group)
|
| 84 |
+
ImageSegmentation/ (Group)
|
| 85 |
+
ROI masks/ (Group)
|
| 86 |
+
id (47,) (int64) (Dataset)
|
| 87 |
+
image_mask (47, 64, 64) (bool) (Dataset)
|
| 88 |
+
imaging_plane/ (Group)
|
| 89 |
+
OpticalChannel/ (Group)
|
| 90 |
+
description (object) (Dataset)
|
| 91 |
+
emission_lambda (float64) (Dataset)
|
| 92 |
+
description (object) (Dataset)
|
| 93 |
+
device/ (Group)
|
| 94 |
+
excitation_lambda (float64) (Dataset)
|
| 95 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 96 |
+
imaging_rate (float64) (Dataset)
|
| 97 |
+
indicator (object) (Dataset)
|
| 98 |
+
location (object) (Dataset)
|
| 99 |
+
nxpix (47,) (int64) (Dataset)
|
| 100 |
+
nypix (47,) (int64) (Dataset)
|
| 101 |
+
reference_images/ (Group)
|
| 102 |
+
roi_ids (47,) (int64) (Dataset)
|
| 103 |
+
roi_sizes (47,) (int64) (Dataset)
|
| 104 |
+
roi_sizes_um2 (47,) (float64) (Dataset)
|
| 105 |
+
session_info/ (Group)
|
| 106 |
+
presentation_sequence/ (Group)
|
| 107 |
+
absolute_start_time (1,) (object) (Dataset)
|
| 108 |
+
id (1,) (int64) (Dataset)
|
| 109 |
+
presentation_order (1,) (int64) (Dataset)
|
| 110 |
+
relative_start_time (1,) (float64) (Dataset)
|
| 111 |
+
stimulus_condition (1,) (object) (Dataset)
|
| 112 |
+
spatial/ (Group)
|
| 113 |
+
spatial_locations/ (Group)
|
| 114 |
+
field_temporal_nasal_pos_um (47,) (float64) (Dataset)
|
| 115 |
+
field_ventral_dorsal_pos_um (47,) (float64) (Dataset)
|
| 116 |
+
id (47,) (int64) (Dataset)
|
| 117 |
+
roi_id (47,) (int64) (Dataset)
|
| 118 |
+
roi_table_link (47,) (int64) (Dataset)
|
| 119 |
+
temporal_nasal_pos_um (47,) (float64) (Dataset)
|
| 120 |
+
ventral_dorsal_pos_um (47,) (float64) (Dataset)
|
| 121 |
+
session_description (object) (Dataset)
|
| 122 |
+
session_start_time (object) (Dataset)
|
| 123 |
+
specifications/ (Group)
|
| 124 |
+
core/ (Group)
|
| 125 |
+
2.8.0/ (Group)
|
| 126 |
+
namespace (object) (Dataset)
|
| 127 |
+
nwb.base (object) (Dataset)
|
| 128 |
+
nwb.behavior (object) (Dataset)
|
| 129 |
+
nwb.device (object) (Dataset)
|
| 130 |
+
nwb.ecephys (object) (Dataset)
|
| 131 |
+
nwb.epoch (object) (Dataset)
|
| 132 |
+
nwb.file (object) (Dataset)
|
| 133 |
+
nwb.icephys (object) (Dataset)
|
| 134 |
+
nwb.image (object) (Dataset)
|
| 135 |
+
nwb.misc (object) (Dataset)
|
| 136 |
+
nwb.ogen (object) (Dataset)
|
| 137 |
+
nwb.ophys (object) (Dataset)
|
| 138 |
+
nwb.retinotopy (object) (Dataset)
|
| 139 |
+
experiment-metadata/ (Group)
|
| 140 |
+
0.1.0/ (Group)
|
| 141 |
+
experiment_metadata.extensions (object) (Dataset)
|
| 142 |
+
namespace (object) (Dataset)
|
| 143 |
+
hdmf-common/ (Group)
|
| 144 |
+
1.8.0/ (Group)
|
| 145 |
+
base (object) (Dataset)
|
| 146 |
+
namespace (object) (Dataset)
|
| 147 |
+
sparse (object) (Dataset)
|
| 148 |
+
table (object) (Dataset)
|
| 149 |
+
hdmf-experimental/ (Group)
|
| 150 |
+
0.5.0/ (Group)
|
| 151 |
+
experimental (object) (Dataset)
|
| 152 |
+
namespace (object) (Dataset)
|
| 153 |
+
resources (object) (Dataset)
|
| 154 |
+
stimulus/ (Group)
|
| 155 |
+
presentation/ (Group)
|
| 156 |
+
movingbar_stimulus/ (Group)
|
| 157 |
+
data (0, 0, 0) (uint8) (Dataset)
|
| 158 |
+
dimension (2,) (int64) (Dataset)
|
| 159 |
+
external_file (1,) (object) (Dataset)
|
| 160 |
+
format (object) (Dataset)
|
| 161 |
+
starting_time (float64) (Dataset)
|
| 162 |
+
templates/ (Group)
|
| 163 |
+
timestamps_reference_time (object) (Dataset)
|
session_Experimenter_2_2022-09-29/experiment_1_LR/field_RGC5_structure.txt
ADDED
|
@@ -0,0 +1,163 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
NWB File Structure Report
|
| 2 |
+
========================
|
| 3 |
+
File: field_RGC5.nwb
|
| 4 |
+
Size: 10.25 MB
|
| 5 |
+
Generated: 2025-10-31 16:16:38
|
| 6 |
+
|
| 7 |
+
Structure:
|
| 8 |
+
----------
|
| 9 |
+
acquisition/ (Group)
|
| 10 |
+
TwoPhotonSeries_Cond_control_movingbar_Pres_1/ (Group)
|
| 11 |
+
data (1139, 64, 64) (uint16) (Dataset)
|
| 12 |
+
imaging_plane/ (Group)
|
| 13 |
+
OpticalChannel/ (Group)
|
| 14 |
+
description (object) (Dataset)
|
| 15 |
+
emission_lambda (float64) (Dataset)
|
| 16 |
+
description (object) (Dataset)
|
| 17 |
+
device/ (Group)
|
| 18 |
+
excitation_lambda (float64) (Dataset)
|
| 19 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 20 |
+
imaging_rate (float64) (Dataset)
|
| 21 |
+
indicator (object) (Dataset)
|
| 22 |
+
location (object) (Dataset)
|
| 23 |
+
timestamps (1139,) (float64) (Dataset)
|
| 24 |
+
analysis/ (Group)
|
| 25 |
+
file_create_date (1,) (object) (Dataset)
|
| 26 |
+
general/ (Group)
|
| 27 |
+
devices/ (Group)
|
| 28 |
+
Microscope/ (Group)
|
| 29 |
+
experiment_metadata/ (Group)
|
| 30 |
+
experiment_number (object) (Dataset)
|
| 31 |
+
eye (object) (Dataset)
|
| 32 |
+
preparation_orientation (object) (Dataset)
|
| 33 |
+
setup_id (object) (Dataset)
|
| 34 |
+
experimenter (1,) (object) (Dataset)
|
| 35 |
+
institution (object) (Dataset)
|
| 36 |
+
lab (object) (Dataset)
|
| 37 |
+
optophysiology/ (Group)
|
| 38 |
+
ImagingPlane/ (Group)
|
| 39 |
+
OpticalChannel/ (Group)
|
| 40 |
+
description (object) (Dataset)
|
| 41 |
+
emission_lambda (float64) (Dataset)
|
| 42 |
+
description (object) (Dataset)
|
| 43 |
+
device/ (Group)
|
| 44 |
+
excitation_lambda (float64) (Dataset)
|
| 45 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 46 |
+
imaging_rate (float64) (Dataset)
|
| 47 |
+
indicator (object) (Dataset)
|
| 48 |
+
location (object) (Dataset)
|
| 49 |
+
related_publications (1,) (object) (Dataset)
|
| 50 |
+
subject/ (Group)
|
| 51 |
+
age (object) (Dataset)
|
| 52 |
+
date_of_birth (object) (Dataset)
|
| 53 |
+
genotype (object) (Dataset)
|
| 54 |
+
sex (object) (Dataset)
|
| 55 |
+
species (object) (Dataset)
|
| 56 |
+
identifier (object) (Dataset)
|
| 57 |
+
processing/ (Group)
|
| 58 |
+
Condition_control/ (Group)
|
| 59 |
+
movingbar_features/ (Group)
|
| 60 |
+
bar_ds_index (68,) (float64) (Dataset)
|
| 61 |
+
bar_ds_pvalue (68,) (float64) (Dataset)
|
| 62 |
+
bar_os_index (68,) (float64) (Dataset)
|
| 63 |
+
bar_os_pvalue (68,) (float64) (Dataset)
|
| 64 |
+
bar_pref_dir (68,) (float64) (Dataset)
|
| 65 |
+
bar_pref_or (68,) (float64) (Dataset)
|
| 66 |
+
bar_pres_qidx (68,) (float64) (Dataset)
|
| 67 |
+
bar_qidx (68,) (float64) (Dataset)
|
| 68 |
+
id (68,) (int64) (Dataset)
|
| 69 |
+
roi_id (68,) (int64) (Dataset)
|
| 70 |
+
roi_table_link (68,) (int64) (Dataset)
|
| 71 |
+
movingbar_preprocessed_traces/ (Group)
|
| 72 |
+
data (1139, 68) (float64) (Dataset)
|
| 73 |
+
timestamps (1139,) (float64) (Dataset)
|
| 74 |
+
movingbar_snippets/ (Group)
|
| 75 |
+
data (33, 68, 24) (float32) (Dataset)
|
| 76 |
+
timestamps (33,) (float64) (Dataset)
|
| 77 |
+
movingbar_snippets_t0/ (Group)
|
| 78 |
+
id (1,) (int64) (Dataset)
|
| 79 |
+
snippets_t0_array (1, 24, 68) (float64) (Dataset)
|
| 80 |
+
movingbar_triggertimes_snippets/ (Group)
|
| 81 |
+
data (1, 68, 24) (float32) (Dataset)
|
| 82 |
+
starting_time (float64) (Dataset)
|
| 83 |
+
rois/ (Group)
|
| 84 |
+
ImageSegmentation/ (Group)
|
| 85 |
+
ROI masks/ (Group)
|
| 86 |
+
id (68,) (int64) (Dataset)
|
| 87 |
+
image_mask (68, 64, 64) (bool) (Dataset)
|
| 88 |
+
imaging_plane/ (Group)
|
| 89 |
+
OpticalChannel/ (Group)
|
| 90 |
+
description (object) (Dataset)
|
| 91 |
+
emission_lambda (float64) (Dataset)
|
| 92 |
+
description (object) (Dataset)
|
| 93 |
+
device/ (Group)
|
| 94 |
+
excitation_lambda (float64) (Dataset)
|
| 95 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 96 |
+
imaging_rate (float64) (Dataset)
|
| 97 |
+
indicator (object) (Dataset)
|
| 98 |
+
location (object) (Dataset)
|
| 99 |
+
nxpix (68,) (int64) (Dataset)
|
| 100 |
+
nypix (68,) (int64) (Dataset)
|
| 101 |
+
reference_images/ (Group)
|
| 102 |
+
roi_ids (68,) (int64) (Dataset)
|
| 103 |
+
roi_sizes (68,) (int64) (Dataset)
|
| 104 |
+
roi_sizes_um2 (68,) (float64) (Dataset)
|
| 105 |
+
session_info/ (Group)
|
| 106 |
+
presentation_sequence/ (Group)
|
| 107 |
+
absolute_start_time (1,) (object) (Dataset)
|
| 108 |
+
id (1,) (int64) (Dataset)
|
| 109 |
+
presentation_order (1,) (int64) (Dataset)
|
| 110 |
+
relative_start_time (1,) (float64) (Dataset)
|
| 111 |
+
stimulus_condition (1,) (object) (Dataset)
|
| 112 |
+
spatial/ (Group)
|
| 113 |
+
spatial_locations/ (Group)
|
| 114 |
+
field_temporal_nasal_pos_um (68,) (float64) (Dataset)
|
| 115 |
+
field_ventral_dorsal_pos_um (68,) (float64) (Dataset)
|
| 116 |
+
id (68,) (int64) (Dataset)
|
| 117 |
+
roi_id (68,) (int64) (Dataset)
|
| 118 |
+
roi_table_link (68,) (int64) (Dataset)
|
| 119 |
+
temporal_nasal_pos_um (68,) (float64) (Dataset)
|
| 120 |
+
ventral_dorsal_pos_um (68,) (float64) (Dataset)
|
| 121 |
+
session_description (object) (Dataset)
|
| 122 |
+
session_start_time (object) (Dataset)
|
| 123 |
+
specifications/ (Group)
|
| 124 |
+
core/ (Group)
|
| 125 |
+
2.8.0/ (Group)
|
| 126 |
+
namespace (object) (Dataset)
|
| 127 |
+
nwb.base (object) (Dataset)
|
| 128 |
+
nwb.behavior (object) (Dataset)
|
| 129 |
+
nwb.device (object) (Dataset)
|
| 130 |
+
nwb.ecephys (object) (Dataset)
|
| 131 |
+
nwb.epoch (object) (Dataset)
|
| 132 |
+
nwb.file (object) (Dataset)
|
| 133 |
+
nwb.icephys (object) (Dataset)
|
| 134 |
+
nwb.image (object) (Dataset)
|
| 135 |
+
nwb.misc (object) (Dataset)
|
| 136 |
+
nwb.ogen (object) (Dataset)
|
| 137 |
+
nwb.ophys (object) (Dataset)
|
| 138 |
+
nwb.retinotopy (object) (Dataset)
|
| 139 |
+
experiment-metadata/ (Group)
|
| 140 |
+
0.1.0/ (Group)
|
| 141 |
+
experiment_metadata.extensions (object) (Dataset)
|
| 142 |
+
namespace (object) (Dataset)
|
| 143 |
+
hdmf-common/ (Group)
|
| 144 |
+
1.8.0/ (Group)
|
| 145 |
+
base (object) (Dataset)
|
| 146 |
+
namespace (object) (Dataset)
|
| 147 |
+
sparse (object) (Dataset)
|
| 148 |
+
table (object) (Dataset)
|
| 149 |
+
hdmf-experimental/ (Group)
|
| 150 |
+
0.5.0/ (Group)
|
| 151 |
+
experimental (object) (Dataset)
|
| 152 |
+
namespace (object) (Dataset)
|
| 153 |
+
resources (object) (Dataset)
|
| 154 |
+
stimulus/ (Group)
|
| 155 |
+
presentation/ (Group)
|
| 156 |
+
movingbar_stimulus/ (Group)
|
| 157 |
+
data (0, 0, 0) (uint8) (Dataset)
|
| 158 |
+
dimension (2,) (int64) (Dataset)
|
| 159 |
+
external_file (1,) (object) (Dataset)
|
| 160 |
+
format (object) (Dataset)
|
| 161 |
+
starting_time (float64) (Dataset)
|
| 162 |
+
templates/ (Group)
|
| 163 |
+
timestamps_reference_time (object) (Dataset)
|
session_Experimenter_2_2022-12-22/experiment_1_RR/field_RGC1_structure.txt
ADDED
|
@@ -0,0 +1,224 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
NWB File Structure Report
|
| 2 |
+
========================
|
| 3 |
+
File: field_RGC1.nwb
|
| 4 |
+
Size: 31.85 MB
|
| 5 |
+
Generated: 2025-10-31 16:17:50
|
| 6 |
+
|
| 7 |
+
Structure:
|
| 8 |
+
----------
|
| 9 |
+
acquisition/ (Group)
|
| 10 |
+
TwoPhotonSeries_Cond_control_chirp_Pres_1/ (Group)
|
| 11 |
+
data (1637, 64, 64) (uint16) (Dataset)
|
| 12 |
+
imaging_plane/ (Group)
|
| 13 |
+
OpticalChannel/ (Group)
|
| 14 |
+
description (object) (Dataset)
|
| 15 |
+
emission_lambda (float64) (Dataset)
|
| 16 |
+
description (object) (Dataset)
|
| 17 |
+
device/ (Group)
|
| 18 |
+
excitation_lambda (float64) (Dataset)
|
| 19 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 20 |
+
imaging_rate (float64) (Dataset)
|
| 21 |
+
indicator (object) (Dataset)
|
| 22 |
+
location (object) (Dataset)
|
| 23 |
+
timestamps (1637,) (float64) (Dataset)
|
| 24 |
+
TwoPhotonSeries_Cond_control_movingbar_Pres_1/ (Group)
|
| 25 |
+
data (1508, 64, 64) (uint16) (Dataset)
|
| 26 |
+
imaging_plane/ (Group)
|
| 27 |
+
OpticalChannel/ (Group)
|
| 28 |
+
description (object) (Dataset)
|
| 29 |
+
emission_lambda (float64) (Dataset)
|
| 30 |
+
description (object) (Dataset)
|
| 31 |
+
device/ (Group)
|
| 32 |
+
excitation_lambda (float64) (Dataset)
|
| 33 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 34 |
+
imaging_rate (float64) (Dataset)
|
| 35 |
+
indicator (object) (Dataset)
|
| 36 |
+
location (object) (Dataset)
|
| 37 |
+
timestamps (1508,) (float64) (Dataset)
|
| 38 |
+
analysis/ (Group)
|
| 39 |
+
file_create_date (1,) (object) (Dataset)
|
| 40 |
+
general/ (Group)
|
| 41 |
+
devices/ (Group)
|
| 42 |
+
Microscope/ (Group)
|
| 43 |
+
experiment_metadata/ (Group)
|
| 44 |
+
experiment_number (object) (Dataset)
|
| 45 |
+
eye (object) (Dataset)
|
| 46 |
+
preparation_orientation (object) (Dataset)
|
| 47 |
+
setup_id (object) (Dataset)
|
| 48 |
+
experimenter (1,) (object) (Dataset)
|
| 49 |
+
institution (object) (Dataset)
|
| 50 |
+
lab (object) (Dataset)
|
| 51 |
+
optophysiology/ (Group)
|
| 52 |
+
ImagingPlane/ (Group)
|
| 53 |
+
OpticalChannel/ (Group)
|
| 54 |
+
description (object) (Dataset)
|
| 55 |
+
emission_lambda (float64) (Dataset)
|
| 56 |
+
description (object) (Dataset)
|
| 57 |
+
device/ (Group)
|
| 58 |
+
excitation_lambda (float64) (Dataset)
|
| 59 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 60 |
+
imaging_rate (float64) (Dataset)
|
| 61 |
+
indicator (object) (Dataset)
|
| 62 |
+
location (object) (Dataset)
|
| 63 |
+
related_publications (1,) (object) (Dataset)
|
| 64 |
+
subject/ (Group)
|
| 65 |
+
age (object) (Dataset)
|
| 66 |
+
date_of_birth (object) (Dataset)
|
| 67 |
+
genotype (object) (Dataset)
|
| 68 |
+
sex (object) (Dataset)
|
| 69 |
+
species (object) (Dataset)
|
| 70 |
+
identifier (object) (Dataset)
|
| 71 |
+
processing/ (Group)
|
| 72 |
+
Condition_control/ (Group)
|
| 73 |
+
cell_types/ (Group)
|
| 74 |
+
cluster_id (113,) (int64) (Dataset)
|
| 75 |
+
condition (113,) (object) (Dataset)
|
| 76 |
+
group_id (113,) (int64) (Dataset)
|
| 77 |
+
id (113,) (int64) (Dataset)
|
| 78 |
+
preproc_bar (113, 32) (float64) (Dataset)
|
| 79 |
+
preproc_chirp (113, 249) (float64) (Dataset)
|
| 80 |
+
prob_class (113,) (float64) (Dataset)
|
| 81 |
+
prob_cluster (113,) (float64) (Dataset)
|
| 82 |
+
prob_group (113,) (float64) (Dataset)
|
| 83 |
+
prob_supergroup (113,) (float64) (Dataset)
|
| 84 |
+
probs_per_cluster (113, 75) (float64) (Dataset)
|
| 85 |
+
roi_id (113,) (int64) (Dataset)
|
| 86 |
+
roi_table_link (113,) (int64) (Dataset)
|
| 87 |
+
supergroup (113,) (object) (Dataset)
|
| 88 |
+
chirp_60Hz_average/ (Group)
|
| 89 |
+
data (1982, 113) (float64) (Dataset)
|
| 90 |
+
timestamps (1982,) (float64) (Dataset)
|
| 91 |
+
chirp_8Hz_average/ (Group)
|
| 92 |
+
data (259, 113) (float64) (Dataset)
|
| 93 |
+
timestamps (259,) (float64) (Dataset)
|
| 94 |
+
chirp_features/ (Group)
|
| 95 |
+
chirp_on_off_index (113,) (float64) (Dataset)
|
| 96 |
+
chirp_pres_qidx (113,) (float64) (Dataset)
|
| 97 |
+
chirp_qidx (113,) (float64) (Dataset)
|
| 98 |
+
chirp_transience_index (113,) (float64) (Dataset)
|
| 99 |
+
id (113,) (int64) (Dataset)
|
| 100 |
+
roi_id (113,) (int64) (Dataset)
|
| 101 |
+
roi_table_link (113,) (int64) (Dataset)
|
| 102 |
+
chirp_preprocessed_traces/ (Group)
|
| 103 |
+
data (1637, 113) (float64) (Dataset)
|
| 104 |
+
timestamps (1637,) (float64) (Dataset)
|
| 105 |
+
chirp_snippets/ (Group)
|
| 106 |
+
data (259, 113, 5) (float64) (Dataset)
|
| 107 |
+
timestamps (259,) (float64) (Dataset)
|
| 108 |
+
chirp_snippets_t0/ (Group)
|
| 109 |
+
id (1,) (int64) (Dataset)
|
| 110 |
+
snippets_t0_array (1, 5, 113) (float64) (Dataset)
|
| 111 |
+
chirp_triggertimes_snippets/ (Group)
|
| 112 |
+
data (2, 113, 5) (float64) (Dataset)
|
| 113 |
+
starting_time (float64) (Dataset)
|
| 114 |
+
movingbar_features/ (Group)
|
| 115 |
+
bar_ds_index (113,) (float64) (Dataset)
|
| 116 |
+
bar_ds_pvalue (113,) (float64) (Dataset)
|
| 117 |
+
bar_os_index (113,) (float64) (Dataset)
|
| 118 |
+
bar_os_pvalue (113,) (float64) (Dataset)
|
| 119 |
+
bar_pref_dir (113,) (float64) (Dataset)
|
| 120 |
+
bar_pref_or (113,) (float64) (Dataset)
|
| 121 |
+
bar_pres_qidx (113,) (float64) (Dataset)
|
| 122 |
+
bar_qidx (113,) (float64) (Dataset)
|
| 123 |
+
id (113,) (int64) (Dataset)
|
| 124 |
+
roi_id (113,) (int64) (Dataset)
|
| 125 |
+
roi_table_link (113,) (int64) (Dataset)
|
| 126 |
+
movingbar_preprocessed_traces/ (Group)
|
| 127 |
+
data (1508, 113) (float64) (Dataset)
|
| 128 |
+
timestamps (1508,) (float64) (Dataset)
|
| 129 |
+
movingbar_snippets/ (Group)
|
| 130 |
+
data (33, 113, 24) (float32) (Dataset)
|
| 131 |
+
timestamps (33,) (float64) (Dataset)
|
| 132 |
+
movingbar_snippets_t0/ (Group)
|
| 133 |
+
id (1,) (int64) (Dataset)
|
| 134 |
+
snippets_t0_array (1, 24, 113) (float64) (Dataset)
|
| 135 |
+
movingbar_triggertimes_snippets/ (Group)
|
| 136 |
+
data (1, 113, 24) (float32) (Dataset)
|
| 137 |
+
starting_time (float64) (Dataset)
|
| 138 |
+
rois/ (Group)
|
| 139 |
+
ImageSegmentation/ (Group)
|
| 140 |
+
ROI masks/ (Group)
|
| 141 |
+
id (113,) (int64) (Dataset)
|
| 142 |
+
image_mask (113, 64, 64) (bool) (Dataset)
|
| 143 |
+
imaging_plane/ (Group)
|
| 144 |
+
OpticalChannel/ (Group)
|
| 145 |
+
description (object) (Dataset)
|
| 146 |
+
emission_lambda (float64) (Dataset)
|
| 147 |
+
description (object) (Dataset)
|
| 148 |
+
device/ (Group)
|
| 149 |
+
excitation_lambda (float64) (Dataset)
|
| 150 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 151 |
+
imaging_rate (float64) (Dataset)
|
| 152 |
+
indicator (object) (Dataset)
|
| 153 |
+
location (object) (Dataset)
|
| 154 |
+
nxpix (113,) (int64) (Dataset)
|
| 155 |
+
nypix (113,) (int64) (Dataset)
|
| 156 |
+
reference_images/ (Group)
|
| 157 |
+
roi_ids (113,) (int64) (Dataset)
|
| 158 |
+
roi_sizes (113,) (int64) (Dataset)
|
| 159 |
+
roi_sizes_um2 (113,) (float64) (Dataset)
|
| 160 |
+
session_info/ (Group)
|
| 161 |
+
presentation_sequence/ (Group)
|
| 162 |
+
absolute_start_time (2,) (object) (Dataset)
|
| 163 |
+
id (2,) (int64) (Dataset)
|
| 164 |
+
presentation_order (2,) (int64) (Dataset)
|
| 165 |
+
relative_start_time (2,) (float64) (Dataset)
|
| 166 |
+
stimulus_condition (2,) (object) (Dataset)
|
| 167 |
+
spatial/ (Group)
|
| 168 |
+
spatial_locations/ (Group)
|
| 169 |
+
field_temporal_nasal_pos_um (113,) (float64) (Dataset)
|
| 170 |
+
field_ventral_dorsal_pos_um (113,) (float64) (Dataset)
|
| 171 |
+
id (113,) (int64) (Dataset)
|
| 172 |
+
roi_id (113,) (int64) (Dataset)
|
| 173 |
+
roi_table_link (113,) (int64) (Dataset)
|
| 174 |
+
temporal_nasal_pos_um (113,) (float64) (Dataset)
|
| 175 |
+
ventral_dorsal_pos_um (113,) (float64) (Dataset)
|
| 176 |
+
session_description (object) (Dataset)
|
| 177 |
+
session_start_time (object) (Dataset)
|
| 178 |
+
specifications/ (Group)
|
| 179 |
+
core/ (Group)
|
| 180 |
+
2.8.0/ (Group)
|
| 181 |
+
namespace (object) (Dataset)
|
| 182 |
+
nwb.base (object) (Dataset)
|
| 183 |
+
nwb.behavior (object) (Dataset)
|
| 184 |
+
nwb.device (object) (Dataset)
|
| 185 |
+
nwb.ecephys (object) (Dataset)
|
| 186 |
+
nwb.epoch (object) (Dataset)
|
| 187 |
+
nwb.file (object) (Dataset)
|
| 188 |
+
nwb.icephys (object) (Dataset)
|
| 189 |
+
nwb.image (object) (Dataset)
|
| 190 |
+
nwb.misc (object) (Dataset)
|
| 191 |
+
nwb.ogen (object) (Dataset)
|
| 192 |
+
nwb.ophys (object) (Dataset)
|
| 193 |
+
nwb.retinotopy (object) (Dataset)
|
| 194 |
+
experiment-metadata/ (Group)
|
| 195 |
+
0.1.0/ (Group)
|
| 196 |
+
experiment_metadata.extensions (object) (Dataset)
|
| 197 |
+
namespace (object) (Dataset)
|
| 198 |
+
hdmf-common/ (Group)
|
| 199 |
+
1.8.0/ (Group)
|
| 200 |
+
base (object) (Dataset)
|
| 201 |
+
namespace (object) (Dataset)
|
| 202 |
+
sparse (object) (Dataset)
|
| 203 |
+
table (object) (Dataset)
|
| 204 |
+
hdmf-experimental/ (Group)
|
| 205 |
+
0.5.0/ (Group)
|
| 206 |
+
experimental (object) (Dataset)
|
| 207 |
+
namespace (object) (Dataset)
|
| 208 |
+
resources (object) (Dataset)
|
| 209 |
+
stimulus/ (Group)
|
| 210 |
+
presentation/ (Group)
|
| 211 |
+
chirp_stimulus/ (Group)
|
| 212 |
+
data (0, 0, 0) (uint8) (Dataset)
|
| 213 |
+
dimension (2,) (int64) (Dataset)
|
| 214 |
+
external_file (1,) (object) (Dataset)
|
| 215 |
+
format (object) (Dataset)
|
| 216 |
+
starting_time (float64) (Dataset)
|
| 217 |
+
movingbar_stimulus/ (Group)
|
| 218 |
+
data (0, 0, 0) (uint8) (Dataset)
|
| 219 |
+
dimension (2,) (int64) (Dataset)
|
| 220 |
+
external_file (1,) (object) (Dataset)
|
| 221 |
+
format (object) (Dataset)
|
| 222 |
+
starting_time (float64) (Dataset)
|
| 223 |
+
templates/ (Group)
|
| 224 |
+
timestamps_reference_time (object) (Dataset)
|
session_Experimenter_2_2022-12-22/experiment_1_RR/field_RGC2_structure.txt
ADDED
|
@@ -0,0 +1,224 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
NWB File Structure Report
|
| 2 |
+
========================
|
| 3 |
+
File: field_RGC2.nwb
|
| 4 |
+
Size: 27.25 MB
|
| 5 |
+
Generated: 2025-10-31 16:17:53
|
| 6 |
+
|
| 7 |
+
Structure:
|
| 8 |
+
----------
|
| 9 |
+
acquisition/ (Group)
|
| 10 |
+
TwoPhotonSeries_Cond_control_chirp_Pres_1/ (Group)
|
| 11 |
+
data (1604, 64, 64) (uint16) (Dataset)
|
| 12 |
+
imaging_plane/ (Group)
|
| 13 |
+
OpticalChannel/ (Group)
|
| 14 |
+
description (object) (Dataset)
|
| 15 |
+
emission_lambda (float64) (Dataset)
|
| 16 |
+
description (object) (Dataset)
|
| 17 |
+
device/ (Group)
|
| 18 |
+
excitation_lambda (float64) (Dataset)
|
| 19 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 20 |
+
imaging_rate (float64) (Dataset)
|
| 21 |
+
indicator (object) (Dataset)
|
| 22 |
+
location (object) (Dataset)
|
| 23 |
+
timestamps (1604,) (float64) (Dataset)
|
| 24 |
+
TwoPhotonSeries_Cond_control_movingbar_Pres_1/ (Group)
|
| 25 |
+
data (1018, 64, 64) (uint16) (Dataset)
|
| 26 |
+
imaging_plane/ (Group)
|
| 27 |
+
OpticalChannel/ (Group)
|
| 28 |
+
description (object) (Dataset)
|
| 29 |
+
emission_lambda (float64) (Dataset)
|
| 30 |
+
description (object) (Dataset)
|
| 31 |
+
device/ (Group)
|
| 32 |
+
excitation_lambda (float64) (Dataset)
|
| 33 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 34 |
+
imaging_rate (float64) (Dataset)
|
| 35 |
+
indicator (object) (Dataset)
|
| 36 |
+
location (object) (Dataset)
|
| 37 |
+
timestamps (1018,) (float64) (Dataset)
|
| 38 |
+
analysis/ (Group)
|
| 39 |
+
file_create_date (1,) (object) (Dataset)
|
| 40 |
+
general/ (Group)
|
| 41 |
+
devices/ (Group)
|
| 42 |
+
Microscope/ (Group)
|
| 43 |
+
experiment_metadata/ (Group)
|
| 44 |
+
experiment_number (object) (Dataset)
|
| 45 |
+
eye (object) (Dataset)
|
| 46 |
+
preparation_orientation (object) (Dataset)
|
| 47 |
+
setup_id (object) (Dataset)
|
| 48 |
+
experimenter (1,) (object) (Dataset)
|
| 49 |
+
institution (object) (Dataset)
|
| 50 |
+
lab (object) (Dataset)
|
| 51 |
+
optophysiology/ (Group)
|
| 52 |
+
ImagingPlane/ (Group)
|
| 53 |
+
OpticalChannel/ (Group)
|
| 54 |
+
description (object) (Dataset)
|
| 55 |
+
emission_lambda (float64) (Dataset)
|
| 56 |
+
description (object) (Dataset)
|
| 57 |
+
device/ (Group)
|
| 58 |
+
excitation_lambda (float64) (Dataset)
|
| 59 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 60 |
+
imaging_rate (float64) (Dataset)
|
| 61 |
+
indicator (object) (Dataset)
|
| 62 |
+
location (object) (Dataset)
|
| 63 |
+
related_publications (1,) (object) (Dataset)
|
| 64 |
+
subject/ (Group)
|
| 65 |
+
age (object) (Dataset)
|
| 66 |
+
date_of_birth (object) (Dataset)
|
| 67 |
+
genotype (object) (Dataset)
|
| 68 |
+
sex (object) (Dataset)
|
| 69 |
+
species (object) (Dataset)
|
| 70 |
+
identifier (object) (Dataset)
|
| 71 |
+
processing/ (Group)
|
| 72 |
+
Condition_control/ (Group)
|
| 73 |
+
cell_types/ (Group)
|
| 74 |
+
cluster_id (112,) (int64) (Dataset)
|
| 75 |
+
condition (112,) (object) (Dataset)
|
| 76 |
+
group_id (112,) (int64) (Dataset)
|
| 77 |
+
id (112,) (int64) (Dataset)
|
| 78 |
+
preproc_bar (112, 32) (float64) (Dataset)
|
| 79 |
+
preproc_chirp (112, 249) (float64) (Dataset)
|
| 80 |
+
prob_class (112,) (float64) (Dataset)
|
| 81 |
+
prob_cluster (112,) (float64) (Dataset)
|
| 82 |
+
prob_group (112,) (float64) (Dataset)
|
| 83 |
+
prob_supergroup (112,) (float64) (Dataset)
|
| 84 |
+
probs_per_cluster (112, 75) (float64) (Dataset)
|
| 85 |
+
roi_id (112,) (int64) (Dataset)
|
| 86 |
+
roi_table_link (112,) (int64) (Dataset)
|
| 87 |
+
supergroup (112,) (object) (Dataset)
|
| 88 |
+
chirp_60Hz_average/ (Group)
|
| 89 |
+
data (1982, 112) (float64) (Dataset)
|
| 90 |
+
timestamps (1982,) (float64) (Dataset)
|
| 91 |
+
chirp_8Hz_average/ (Group)
|
| 92 |
+
data (259, 112) (float64) (Dataset)
|
| 93 |
+
timestamps (259,) (float64) (Dataset)
|
| 94 |
+
chirp_features/ (Group)
|
| 95 |
+
chirp_on_off_index (112,) (float64) (Dataset)
|
| 96 |
+
chirp_pres_qidx (112,) (float64) (Dataset)
|
| 97 |
+
chirp_qidx (112,) (float64) (Dataset)
|
| 98 |
+
chirp_transience_index (112,) (float64) (Dataset)
|
| 99 |
+
id (112,) (int64) (Dataset)
|
| 100 |
+
roi_id (112,) (int64) (Dataset)
|
| 101 |
+
roi_table_link (112,) (int64) (Dataset)
|
| 102 |
+
chirp_preprocessed_traces/ (Group)
|
| 103 |
+
data (1604, 112) (float64) (Dataset)
|
| 104 |
+
timestamps (1604,) (float64) (Dataset)
|
| 105 |
+
chirp_snippets/ (Group)
|
| 106 |
+
data (259, 112, 5) (float64) (Dataset)
|
| 107 |
+
timestamps (259,) (float64) (Dataset)
|
| 108 |
+
chirp_snippets_t0/ (Group)
|
| 109 |
+
id (1,) (int64) (Dataset)
|
| 110 |
+
snippets_t0_array (1, 5, 112) (float64) (Dataset)
|
| 111 |
+
chirp_triggertimes_snippets/ (Group)
|
| 112 |
+
data (2, 112, 5) (float64) (Dataset)
|
| 113 |
+
starting_time (float64) (Dataset)
|
| 114 |
+
movingbar_features/ (Group)
|
| 115 |
+
bar_ds_index (112,) (float64) (Dataset)
|
| 116 |
+
bar_ds_pvalue (112,) (float64) (Dataset)
|
| 117 |
+
bar_os_index (112,) (float64) (Dataset)
|
| 118 |
+
bar_os_pvalue (112,) (float64) (Dataset)
|
| 119 |
+
bar_pref_dir (112,) (float64) (Dataset)
|
| 120 |
+
bar_pref_or (112,) (float64) (Dataset)
|
| 121 |
+
bar_pres_qidx (112,) (float64) (Dataset)
|
| 122 |
+
bar_qidx (112,) (float64) (Dataset)
|
| 123 |
+
id (112,) (int64) (Dataset)
|
| 124 |
+
roi_id (112,) (int64) (Dataset)
|
| 125 |
+
roi_table_link (112,) (int64) (Dataset)
|
| 126 |
+
movingbar_preprocessed_traces/ (Group)
|
| 127 |
+
data (1018, 112) (float64) (Dataset)
|
| 128 |
+
timestamps (1018,) (float64) (Dataset)
|
| 129 |
+
movingbar_snippets/ (Group)
|
| 130 |
+
data (33, 112, 24) (float32) (Dataset)
|
| 131 |
+
timestamps (33,) (float64) (Dataset)
|
| 132 |
+
movingbar_snippets_t0/ (Group)
|
| 133 |
+
id (1,) (int64) (Dataset)
|
| 134 |
+
snippets_t0_array (1, 24, 112) (float64) (Dataset)
|
| 135 |
+
movingbar_triggertimes_snippets/ (Group)
|
| 136 |
+
data (1, 112, 24) (float32) (Dataset)
|
| 137 |
+
starting_time (float64) (Dataset)
|
| 138 |
+
rois/ (Group)
|
| 139 |
+
ImageSegmentation/ (Group)
|
| 140 |
+
ROI masks/ (Group)
|
| 141 |
+
id (112,) (int64) (Dataset)
|
| 142 |
+
image_mask (112, 64, 64) (bool) (Dataset)
|
| 143 |
+
imaging_plane/ (Group)
|
| 144 |
+
OpticalChannel/ (Group)
|
| 145 |
+
description (object) (Dataset)
|
| 146 |
+
emission_lambda (float64) (Dataset)
|
| 147 |
+
description (object) (Dataset)
|
| 148 |
+
device/ (Group)
|
| 149 |
+
excitation_lambda (float64) (Dataset)
|
| 150 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 151 |
+
imaging_rate (float64) (Dataset)
|
| 152 |
+
indicator (object) (Dataset)
|
| 153 |
+
location (object) (Dataset)
|
| 154 |
+
nxpix (112,) (int64) (Dataset)
|
| 155 |
+
nypix (112,) (int64) (Dataset)
|
| 156 |
+
reference_images/ (Group)
|
| 157 |
+
roi_ids (112,) (int64) (Dataset)
|
| 158 |
+
roi_sizes (112,) (int64) (Dataset)
|
| 159 |
+
roi_sizes_um2 (112,) (float64) (Dataset)
|
| 160 |
+
session_info/ (Group)
|
| 161 |
+
presentation_sequence/ (Group)
|
| 162 |
+
absolute_start_time (2,) (object) (Dataset)
|
| 163 |
+
id (2,) (int64) (Dataset)
|
| 164 |
+
presentation_order (2,) (int64) (Dataset)
|
| 165 |
+
relative_start_time (2,) (float64) (Dataset)
|
| 166 |
+
stimulus_condition (2,) (object) (Dataset)
|
| 167 |
+
spatial/ (Group)
|
| 168 |
+
spatial_locations/ (Group)
|
| 169 |
+
field_temporal_nasal_pos_um (112,) (float64) (Dataset)
|
| 170 |
+
field_ventral_dorsal_pos_um (112,) (float64) (Dataset)
|
| 171 |
+
id (112,) (int64) (Dataset)
|
| 172 |
+
roi_id (112,) (int64) (Dataset)
|
| 173 |
+
roi_table_link (112,) (int64) (Dataset)
|
| 174 |
+
temporal_nasal_pos_um (112,) (float64) (Dataset)
|
| 175 |
+
ventral_dorsal_pos_um (112,) (float64) (Dataset)
|
| 176 |
+
session_description (object) (Dataset)
|
| 177 |
+
session_start_time (object) (Dataset)
|
| 178 |
+
specifications/ (Group)
|
| 179 |
+
core/ (Group)
|
| 180 |
+
2.8.0/ (Group)
|
| 181 |
+
namespace (object) (Dataset)
|
| 182 |
+
nwb.base (object) (Dataset)
|
| 183 |
+
nwb.behavior (object) (Dataset)
|
| 184 |
+
nwb.device (object) (Dataset)
|
| 185 |
+
nwb.ecephys (object) (Dataset)
|
| 186 |
+
nwb.epoch (object) (Dataset)
|
| 187 |
+
nwb.file (object) (Dataset)
|
| 188 |
+
nwb.icephys (object) (Dataset)
|
| 189 |
+
nwb.image (object) (Dataset)
|
| 190 |
+
nwb.misc (object) (Dataset)
|
| 191 |
+
nwb.ogen (object) (Dataset)
|
| 192 |
+
nwb.ophys (object) (Dataset)
|
| 193 |
+
nwb.retinotopy (object) (Dataset)
|
| 194 |
+
experiment-metadata/ (Group)
|
| 195 |
+
0.1.0/ (Group)
|
| 196 |
+
experiment_metadata.extensions (object) (Dataset)
|
| 197 |
+
namespace (object) (Dataset)
|
| 198 |
+
hdmf-common/ (Group)
|
| 199 |
+
1.8.0/ (Group)
|
| 200 |
+
base (object) (Dataset)
|
| 201 |
+
namespace (object) (Dataset)
|
| 202 |
+
sparse (object) (Dataset)
|
| 203 |
+
table (object) (Dataset)
|
| 204 |
+
hdmf-experimental/ (Group)
|
| 205 |
+
0.5.0/ (Group)
|
| 206 |
+
experimental (object) (Dataset)
|
| 207 |
+
namespace (object) (Dataset)
|
| 208 |
+
resources (object) (Dataset)
|
| 209 |
+
stimulus/ (Group)
|
| 210 |
+
presentation/ (Group)
|
| 211 |
+
chirp_stimulus/ (Group)
|
| 212 |
+
data (0, 0, 0) (uint8) (Dataset)
|
| 213 |
+
dimension (2,) (int64) (Dataset)
|
| 214 |
+
external_file (1,) (object) (Dataset)
|
| 215 |
+
format (object) (Dataset)
|
| 216 |
+
starting_time (float64) (Dataset)
|
| 217 |
+
movingbar_stimulus/ (Group)
|
| 218 |
+
data (0, 0, 0) (uint8) (Dataset)
|
| 219 |
+
dimension (2,) (int64) (Dataset)
|
| 220 |
+
external_file (1,) (object) (Dataset)
|
| 221 |
+
format (object) (Dataset)
|
| 222 |
+
starting_time (float64) (Dataset)
|
| 223 |
+
templates/ (Group)
|
| 224 |
+
timestamps_reference_time (object) (Dataset)
|
session_Experimenter_2_2022-12-22/experiment_2_LR/field_RGC0_structure.txt
ADDED
|
@@ -0,0 +1,204 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
NWB File Structure Report
|
| 2 |
+
========================
|
| 3 |
+
File: field_RGC0.nwb
|
| 4 |
+
Size: 25.38 MB
|
| 5 |
+
Generated: 2025-10-31 16:17:55
|
| 6 |
+
|
| 7 |
+
Structure:
|
| 8 |
+
----------
|
| 9 |
+
acquisition/ (Group)
|
| 10 |
+
TwoPhotonSeries_Cond_control_chirp_Pres_1/ (Group)
|
| 11 |
+
data (1472, 64, 64) (uint16) (Dataset)
|
| 12 |
+
imaging_plane/ (Group)
|
| 13 |
+
OpticalChannel/ (Group)
|
| 14 |
+
description (object) (Dataset)
|
| 15 |
+
emission_lambda (float64) (Dataset)
|
| 16 |
+
description (object) (Dataset)
|
| 17 |
+
device/ (Group)
|
| 18 |
+
excitation_lambda (float64) (Dataset)
|
| 19 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 20 |
+
imaging_rate (float64) (Dataset)
|
| 21 |
+
indicator (object) (Dataset)
|
| 22 |
+
location (object) (Dataset)
|
| 23 |
+
timestamps (1472,) (float64) (Dataset)
|
| 24 |
+
TwoPhotonSeries_Cond_control_movingbar_Pres_1/ (Group)
|
| 25 |
+
data (1081, 64, 64) (uint16) (Dataset)
|
| 26 |
+
imaging_plane/ (Group)
|
| 27 |
+
OpticalChannel/ (Group)
|
| 28 |
+
description (object) (Dataset)
|
| 29 |
+
emission_lambda (float64) (Dataset)
|
| 30 |
+
description (object) (Dataset)
|
| 31 |
+
device/ (Group)
|
| 32 |
+
excitation_lambda (float64) (Dataset)
|
| 33 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 34 |
+
imaging_rate (float64) (Dataset)
|
| 35 |
+
indicator (object) (Dataset)
|
| 36 |
+
location (object) (Dataset)
|
| 37 |
+
timestamps (1081,) (float64) (Dataset)
|
| 38 |
+
analysis/ (Group)
|
| 39 |
+
file_create_date (1,) (object) (Dataset)
|
| 40 |
+
general/ (Group)
|
| 41 |
+
devices/ (Group)
|
| 42 |
+
Microscope/ (Group)
|
| 43 |
+
experiment_metadata/ (Group)
|
| 44 |
+
experiment_number (object) (Dataset)
|
| 45 |
+
eye (object) (Dataset)
|
| 46 |
+
preparation_orientation (object) (Dataset)
|
| 47 |
+
setup_id (object) (Dataset)
|
| 48 |
+
experimenter (1,) (object) (Dataset)
|
| 49 |
+
institution (object) (Dataset)
|
| 50 |
+
lab (object) (Dataset)
|
| 51 |
+
optophysiology/ (Group)
|
| 52 |
+
ImagingPlane/ (Group)
|
| 53 |
+
OpticalChannel/ (Group)
|
| 54 |
+
description (object) (Dataset)
|
| 55 |
+
emission_lambda (float64) (Dataset)
|
| 56 |
+
description (object) (Dataset)
|
| 57 |
+
device/ (Group)
|
| 58 |
+
excitation_lambda (float64) (Dataset)
|
| 59 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 60 |
+
imaging_rate (float64) (Dataset)
|
| 61 |
+
indicator (object) (Dataset)
|
| 62 |
+
location (object) (Dataset)
|
| 63 |
+
related_publications (1,) (object) (Dataset)
|
| 64 |
+
subject/ (Group)
|
| 65 |
+
age (object) (Dataset)
|
| 66 |
+
date_of_birth (object) (Dataset)
|
| 67 |
+
genotype (object) (Dataset)
|
| 68 |
+
sex (object) (Dataset)
|
| 69 |
+
species (object) (Dataset)
|
| 70 |
+
identifier (object) (Dataset)
|
| 71 |
+
processing/ (Group)
|
| 72 |
+
Condition_control/ (Group)
|
| 73 |
+
cell_types/ (Group)
|
| 74 |
+
cluster_id (90,) (int64) (Dataset)
|
| 75 |
+
condition (90,) (object) (Dataset)
|
| 76 |
+
group_id (90,) (int64) (Dataset)
|
| 77 |
+
id (90,) (int64) (Dataset)
|
| 78 |
+
preproc_bar (90, 32) (float64) (Dataset)
|
| 79 |
+
preproc_chirp (90, 249) (float64) (Dataset)
|
| 80 |
+
prob_class (90,) (float64) (Dataset)
|
| 81 |
+
prob_cluster (90,) (float64) (Dataset)
|
| 82 |
+
prob_group (90,) (float64) (Dataset)
|
| 83 |
+
prob_supergroup (90,) (float64) (Dataset)
|
| 84 |
+
probs_per_cluster (90, 75) (float64) (Dataset)
|
| 85 |
+
roi_id (90,) (int64) (Dataset)
|
| 86 |
+
roi_table_link (90,) (int64) (Dataset)
|
| 87 |
+
supergroup (90,) (object) (Dataset)
|
| 88 |
+
chirp_60Hz_average/ (Group)
|
| 89 |
+
data (1982, 90) (float64) (Dataset)
|
| 90 |
+
timestamps (1982,) (float64) (Dataset)
|
| 91 |
+
chirp_8Hz_average/ (Group)
|
| 92 |
+
data (259, 90) (float64) (Dataset)
|
| 93 |
+
timestamps (259,) (float64) (Dataset)
|
| 94 |
+
chirp_features/ (Group)
|
| 95 |
+
chirp_on_off_index (90,) (float64) (Dataset)
|
| 96 |
+
chirp_pres_qidx (90,) (float64) (Dataset)
|
| 97 |
+
chirp_qidx (90,) (float64) (Dataset)
|
| 98 |
+
chirp_transience_index (90,) (float64) (Dataset)
|
| 99 |
+
id (90,) (int64) (Dataset)
|
| 100 |
+
roi_id (90,) (int64) (Dataset)
|
| 101 |
+
roi_table_link (90,) (int64) (Dataset)
|
| 102 |
+
chirp_preprocessed_traces/ (Group)
|
| 103 |
+
data (1472, 90) (float64) (Dataset)
|
| 104 |
+
timestamps (1472,) (float64) (Dataset)
|
| 105 |
+
chirp_snippets/ (Group)
|
| 106 |
+
data (259, 90, 5) (float64) (Dataset)
|
| 107 |
+
timestamps (259,) (float64) (Dataset)
|
| 108 |
+
chirp_snippets_t0/ (Group)
|
| 109 |
+
id (1,) (int64) (Dataset)
|
| 110 |
+
snippets_t0_array (1, 5, 90) (float64) (Dataset)
|
| 111 |
+
chirp_triggertimes_snippets/ (Group)
|
| 112 |
+
data (2, 90, 5) (float64) (Dataset)
|
| 113 |
+
starting_time (float64) (Dataset)
|
| 114 |
+
movingbar_features/ (Group)
|
| 115 |
+
bar_ds_index (90,) (float64) (Dataset)
|
| 116 |
+
bar_ds_pvalue (90,) (float64) (Dataset)
|
| 117 |
+
bar_os_index (90,) (float64) (Dataset)
|
| 118 |
+
bar_os_pvalue (90,) (float64) (Dataset)
|
| 119 |
+
bar_pref_dir (90,) (float64) (Dataset)
|
| 120 |
+
bar_pref_or (90,) (float64) (Dataset)
|
| 121 |
+
bar_pres_qidx (90,) (float64) (Dataset)
|
| 122 |
+
bar_qidx (90,) (float64) (Dataset)
|
| 123 |
+
id (90,) (int64) (Dataset)
|
| 124 |
+
roi_id (90,) (int64) (Dataset)
|
| 125 |
+
roi_table_link (90,) (int64) (Dataset)
|
| 126 |
+
movingbar_preprocessed_traces/ (Group)
|
| 127 |
+
data (1081, 90) (float64) (Dataset)
|
| 128 |
+
timestamps (1081,) (float64) (Dataset)
|
| 129 |
+
movingbar_snippets/ (Group)
|
| 130 |
+
data (33, 90, 24) (float32) (Dataset)
|
| 131 |
+
timestamps (33,) (float64) (Dataset)
|
| 132 |
+
movingbar_snippets_t0/ (Group)
|
| 133 |
+
id (1,) (int64) (Dataset)
|
| 134 |
+
snippets_t0_array (1, 24, 90) (float64) (Dataset)
|
| 135 |
+
movingbar_triggertimes_snippets/ (Group)
|
| 136 |
+
data (1, 90, 24) (float32) (Dataset)
|
| 137 |
+
starting_time (float64) (Dataset)
|
| 138 |
+
rois/ (Group)
|
| 139 |
+
ImageSegmentation/ (Group)
|
| 140 |
+
ROI masks/ (Group)
|
| 141 |
+
id (90,) (int64) (Dataset)
|
| 142 |
+
image_mask (90, 64, 64) (bool) (Dataset)
|
| 143 |
+
imaging_plane/ (Group)
|
| 144 |
+
OpticalChannel/ (Group)
|
| 145 |
+
description (object) (Dataset)
|
| 146 |
+
emission_lambda (float64) (Dataset)
|
| 147 |
+
description (object) (Dataset)
|
| 148 |
+
device/ (Group)
|
| 149 |
+
excitation_lambda (float64) (Dataset)
|
| 150 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 151 |
+
imaging_rate (float64) (Dataset)
|
| 152 |
+
indicator (object) (Dataset)
|
| 153 |
+
location (object) (Dataset)
|
| 154 |
+
nxpix (90,) (int64) (Dataset)
|
| 155 |
+
nypix (90,) (int64) (Dataset)
|
| 156 |
+
reference_images/ (Group)
|
| 157 |
+
roi_ids (90,) (int64) (Dataset)
|
| 158 |
+
roi_sizes (90,) (int64) (Dataset)
|
| 159 |
+
roi_sizes_um2 (90,) (float64) (Dataset)
|
| 160 |
+
session_info/ (Group)
|
| 161 |
+
presentation_sequence/ (Group)
|
| 162 |
+
absolute_start_time (2,) (object) (Dataset)
|
| 163 |
+
id (2,) (int64) (Dataset)
|
| 164 |
+
presentation_order (2,) (int64) (Dataset)
|
| 165 |
+
relative_start_time (2,) (float64) (Dataset)
|
| 166 |
+
stimulus_condition (2,) (object) (Dataset)
|
| 167 |
+
spatial/ (Group)
|
| 168 |
+
session_description (object) (Dataset)
|
| 169 |
+
session_start_time (object) (Dataset)
|
| 170 |
+
specifications/ (Group)
|
| 171 |
+
core/ (Group)
|
| 172 |
+
2.8.0/ (Group)
|
| 173 |
+
namespace (object) (Dataset)
|
| 174 |
+
nwb.base (object) (Dataset)
|
| 175 |
+
nwb.behavior (object) (Dataset)
|
| 176 |
+
nwb.device (object) (Dataset)
|
| 177 |
+
nwb.ecephys (object) (Dataset)
|
| 178 |
+
nwb.epoch (object) (Dataset)
|
| 179 |
+
nwb.file (object) (Dataset)
|
| 180 |
+
nwb.icephys (object) (Dataset)
|
| 181 |
+
nwb.image (object) (Dataset)
|
| 182 |
+
nwb.misc (object) (Dataset)
|
| 183 |
+
nwb.ogen (object) (Dataset)
|
| 184 |
+
nwb.ophys (object) (Dataset)
|
| 185 |
+
nwb.retinotopy (object) (Dataset)
|
| 186 |
+
experiment-metadata/ (Group)
|
| 187 |
+
0.1.0/ (Group)
|
| 188 |
+
experiment_metadata.extensions (object) (Dataset)
|
| 189 |
+
namespace (object) (Dataset)
|
| 190 |
+
hdmf-common/ (Group)
|
| 191 |
+
1.8.0/ (Group)
|
| 192 |
+
base (object) (Dataset)
|
| 193 |
+
namespace (object) (Dataset)
|
| 194 |
+
sparse (object) (Dataset)
|
| 195 |
+
table (object) (Dataset)
|
| 196 |
+
hdmf-experimental/ (Group)
|
| 197 |
+
0.5.0/ (Group)
|
| 198 |
+
experimental (object) (Dataset)
|
| 199 |
+
namespace (object) (Dataset)
|
| 200 |
+
resources (object) (Dataset)
|
| 201 |
+
stimulus/ (Group)
|
| 202 |
+
presentation/ (Group)
|
| 203 |
+
templates/ (Group)
|
| 204 |
+
timestamps_reference_time (object) (Dataset)
|
session_Experimenter_2_2022-12-22/experiment_2_LR/field_RGC1_structure.txt
ADDED
|
@@ -0,0 +1,204 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
NWB File Structure Report
|
| 2 |
+
========================
|
| 3 |
+
File: field_RGC1.nwb
|
| 4 |
+
Size: 30.15 MB
|
| 5 |
+
Generated: 2025-10-31 16:17:57
|
| 6 |
+
|
| 7 |
+
Structure:
|
| 8 |
+
----------
|
| 9 |
+
acquisition/ (Group)
|
| 10 |
+
TwoPhotonSeries_Cond_control_chirp_Pres_1/ (Group)
|
| 11 |
+
data (2000, 64, 64) (uint16) (Dataset)
|
| 12 |
+
imaging_plane/ (Group)
|
| 13 |
+
OpticalChannel/ (Group)
|
| 14 |
+
description (object) (Dataset)
|
| 15 |
+
emission_lambda (float64) (Dataset)
|
| 16 |
+
description (object) (Dataset)
|
| 17 |
+
device/ (Group)
|
| 18 |
+
excitation_lambda (float64) (Dataset)
|
| 19 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 20 |
+
imaging_rate (float64) (Dataset)
|
| 21 |
+
indicator (object) (Dataset)
|
| 22 |
+
location (object) (Dataset)
|
| 23 |
+
timestamps (2000,) (float64) (Dataset)
|
| 24 |
+
TwoPhotonSeries_Cond_control_movingbar_Pres_1/ (Group)
|
| 25 |
+
data (1135, 64, 64) (uint16) (Dataset)
|
| 26 |
+
imaging_plane/ (Group)
|
| 27 |
+
OpticalChannel/ (Group)
|
| 28 |
+
description (object) (Dataset)
|
| 29 |
+
emission_lambda (float64) (Dataset)
|
| 30 |
+
description (object) (Dataset)
|
| 31 |
+
device/ (Group)
|
| 32 |
+
excitation_lambda (float64) (Dataset)
|
| 33 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 34 |
+
imaging_rate (float64) (Dataset)
|
| 35 |
+
indicator (object) (Dataset)
|
| 36 |
+
location (object) (Dataset)
|
| 37 |
+
timestamps (1135,) (float64) (Dataset)
|
| 38 |
+
analysis/ (Group)
|
| 39 |
+
file_create_date (1,) (object) (Dataset)
|
| 40 |
+
general/ (Group)
|
| 41 |
+
devices/ (Group)
|
| 42 |
+
Microscope/ (Group)
|
| 43 |
+
experiment_metadata/ (Group)
|
| 44 |
+
experiment_number (object) (Dataset)
|
| 45 |
+
eye (object) (Dataset)
|
| 46 |
+
preparation_orientation (object) (Dataset)
|
| 47 |
+
setup_id (object) (Dataset)
|
| 48 |
+
experimenter (1,) (object) (Dataset)
|
| 49 |
+
institution (object) (Dataset)
|
| 50 |
+
lab (object) (Dataset)
|
| 51 |
+
optophysiology/ (Group)
|
| 52 |
+
ImagingPlane/ (Group)
|
| 53 |
+
OpticalChannel/ (Group)
|
| 54 |
+
description (object) (Dataset)
|
| 55 |
+
emission_lambda (float64) (Dataset)
|
| 56 |
+
description (object) (Dataset)
|
| 57 |
+
device/ (Group)
|
| 58 |
+
excitation_lambda (float64) (Dataset)
|
| 59 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 60 |
+
imaging_rate (float64) (Dataset)
|
| 61 |
+
indicator (object) (Dataset)
|
| 62 |
+
location (object) (Dataset)
|
| 63 |
+
related_publications (1,) (object) (Dataset)
|
| 64 |
+
subject/ (Group)
|
| 65 |
+
age (object) (Dataset)
|
| 66 |
+
date_of_birth (object) (Dataset)
|
| 67 |
+
genotype (object) (Dataset)
|
| 68 |
+
sex (object) (Dataset)
|
| 69 |
+
species (object) (Dataset)
|
| 70 |
+
identifier (object) (Dataset)
|
| 71 |
+
processing/ (Group)
|
| 72 |
+
Condition_control/ (Group)
|
| 73 |
+
cell_types/ (Group)
|
| 74 |
+
cluster_id (87,) (int64) (Dataset)
|
| 75 |
+
condition (87,) (object) (Dataset)
|
| 76 |
+
group_id (87,) (int64) (Dataset)
|
| 77 |
+
id (87,) (int64) (Dataset)
|
| 78 |
+
preproc_bar (87, 32) (float64) (Dataset)
|
| 79 |
+
preproc_chirp (87, 249) (float64) (Dataset)
|
| 80 |
+
prob_class (87,) (float64) (Dataset)
|
| 81 |
+
prob_cluster (87,) (float64) (Dataset)
|
| 82 |
+
prob_group (87,) (float64) (Dataset)
|
| 83 |
+
prob_supergroup (87,) (float64) (Dataset)
|
| 84 |
+
probs_per_cluster (87, 75) (float64) (Dataset)
|
| 85 |
+
roi_id (87,) (int64) (Dataset)
|
| 86 |
+
roi_table_link (87,) (int64) (Dataset)
|
| 87 |
+
supergroup (87,) (object) (Dataset)
|
| 88 |
+
chirp_60Hz_average/ (Group)
|
| 89 |
+
data (1982, 87) (float64) (Dataset)
|
| 90 |
+
timestamps (1982,) (float64) (Dataset)
|
| 91 |
+
chirp_8Hz_average/ (Group)
|
| 92 |
+
data (259, 87) (float64) (Dataset)
|
| 93 |
+
timestamps (259,) (float64) (Dataset)
|
| 94 |
+
chirp_features/ (Group)
|
| 95 |
+
chirp_on_off_index (87,) (float64) (Dataset)
|
| 96 |
+
chirp_pres_qidx (87,) (float64) (Dataset)
|
| 97 |
+
chirp_qidx (87,) (float64) (Dataset)
|
| 98 |
+
chirp_transience_index (87,) (float64) (Dataset)
|
| 99 |
+
id (87,) (int64) (Dataset)
|
| 100 |
+
roi_id (87,) (int64) (Dataset)
|
| 101 |
+
roi_table_link (87,) (int64) (Dataset)
|
| 102 |
+
chirp_preprocessed_traces/ (Group)
|
| 103 |
+
data (2000, 87) (float64) (Dataset)
|
| 104 |
+
timestamps (2000,) (float64) (Dataset)
|
| 105 |
+
chirp_snippets/ (Group)
|
| 106 |
+
data (259, 87, 5) (float64) (Dataset)
|
| 107 |
+
timestamps (259,) (float64) (Dataset)
|
| 108 |
+
chirp_snippets_t0/ (Group)
|
| 109 |
+
id (1,) (int64) (Dataset)
|
| 110 |
+
snippets_t0_array (1, 5, 87) (float64) (Dataset)
|
| 111 |
+
chirp_triggertimes_snippets/ (Group)
|
| 112 |
+
data (2, 87, 5) (float64) (Dataset)
|
| 113 |
+
starting_time (float64) (Dataset)
|
| 114 |
+
movingbar_features/ (Group)
|
| 115 |
+
bar_ds_index (87,) (float64) (Dataset)
|
| 116 |
+
bar_ds_pvalue (87,) (float64) (Dataset)
|
| 117 |
+
bar_os_index (87,) (float64) (Dataset)
|
| 118 |
+
bar_os_pvalue (87,) (float64) (Dataset)
|
| 119 |
+
bar_pref_dir (87,) (float64) (Dataset)
|
| 120 |
+
bar_pref_or (87,) (float64) (Dataset)
|
| 121 |
+
bar_pres_qidx (87,) (float64) (Dataset)
|
| 122 |
+
bar_qidx (87,) (float64) (Dataset)
|
| 123 |
+
id (87,) (int64) (Dataset)
|
| 124 |
+
roi_id (87,) (int64) (Dataset)
|
| 125 |
+
roi_table_link (87,) (int64) (Dataset)
|
| 126 |
+
movingbar_preprocessed_traces/ (Group)
|
| 127 |
+
data (1135, 87) (float64) (Dataset)
|
| 128 |
+
timestamps (1135,) (float64) (Dataset)
|
| 129 |
+
movingbar_snippets/ (Group)
|
| 130 |
+
data (33, 87, 24) (float32) (Dataset)
|
| 131 |
+
timestamps (33,) (float64) (Dataset)
|
| 132 |
+
movingbar_snippets_t0/ (Group)
|
| 133 |
+
id (1,) (int64) (Dataset)
|
| 134 |
+
snippets_t0_array (1, 24, 87) (float64) (Dataset)
|
| 135 |
+
movingbar_triggertimes_snippets/ (Group)
|
| 136 |
+
data (1, 87, 24) (float32) (Dataset)
|
| 137 |
+
starting_time (float64) (Dataset)
|
| 138 |
+
rois/ (Group)
|
| 139 |
+
ImageSegmentation/ (Group)
|
| 140 |
+
ROI masks/ (Group)
|
| 141 |
+
id (87,) (int64) (Dataset)
|
| 142 |
+
image_mask (87, 64, 64) (bool) (Dataset)
|
| 143 |
+
imaging_plane/ (Group)
|
| 144 |
+
OpticalChannel/ (Group)
|
| 145 |
+
description (object) (Dataset)
|
| 146 |
+
emission_lambda (float64) (Dataset)
|
| 147 |
+
description (object) (Dataset)
|
| 148 |
+
device/ (Group)
|
| 149 |
+
excitation_lambda (float64) (Dataset)
|
| 150 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 151 |
+
imaging_rate (float64) (Dataset)
|
| 152 |
+
indicator (object) (Dataset)
|
| 153 |
+
location (object) (Dataset)
|
| 154 |
+
nxpix (87,) (int64) (Dataset)
|
| 155 |
+
nypix (87,) (int64) (Dataset)
|
| 156 |
+
reference_images/ (Group)
|
| 157 |
+
roi_ids (87,) (int64) (Dataset)
|
| 158 |
+
roi_sizes (87,) (int64) (Dataset)
|
| 159 |
+
roi_sizes_um2 (87,) (float64) (Dataset)
|
| 160 |
+
session_info/ (Group)
|
| 161 |
+
presentation_sequence/ (Group)
|
| 162 |
+
absolute_start_time (2,) (object) (Dataset)
|
| 163 |
+
id (2,) (int64) (Dataset)
|
| 164 |
+
presentation_order (2,) (int64) (Dataset)
|
| 165 |
+
relative_start_time (2,) (float64) (Dataset)
|
| 166 |
+
stimulus_condition (2,) (object) (Dataset)
|
| 167 |
+
spatial/ (Group)
|
| 168 |
+
session_description (object) (Dataset)
|
| 169 |
+
session_start_time (object) (Dataset)
|
| 170 |
+
specifications/ (Group)
|
| 171 |
+
core/ (Group)
|
| 172 |
+
2.8.0/ (Group)
|
| 173 |
+
namespace (object) (Dataset)
|
| 174 |
+
nwb.base (object) (Dataset)
|
| 175 |
+
nwb.behavior (object) (Dataset)
|
| 176 |
+
nwb.device (object) (Dataset)
|
| 177 |
+
nwb.ecephys (object) (Dataset)
|
| 178 |
+
nwb.epoch (object) (Dataset)
|
| 179 |
+
nwb.file (object) (Dataset)
|
| 180 |
+
nwb.icephys (object) (Dataset)
|
| 181 |
+
nwb.image (object) (Dataset)
|
| 182 |
+
nwb.misc (object) (Dataset)
|
| 183 |
+
nwb.ogen (object) (Dataset)
|
| 184 |
+
nwb.ophys (object) (Dataset)
|
| 185 |
+
nwb.retinotopy (object) (Dataset)
|
| 186 |
+
experiment-metadata/ (Group)
|
| 187 |
+
0.1.0/ (Group)
|
| 188 |
+
experiment_metadata.extensions (object) (Dataset)
|
| 189 |
+
namespace (object) (Dataset)
|
| 190 |
+
hdmf-common/ (Group)
|
| 191 |
+
1.8.0/ (Group)
|
| 192 |
+
base (object) (Dataset)
|
| 193 |
+
namespace (object) (Dataset)
|
| 194 |
+
sparse (object) (Dataset)
|
| 195 |
+
table (object) (Dataset)
|
| 196 |
+
hdmf-experimental/ (Group)
|
| 197 |
+
0.5.0/ (Group)
|
| 198 |
+
experimental (object) (Dataset)
|
| 199 |
+
namespace (object) (Dataset)
|
| 200 |
+
resources (object) (Dataset)
|
| 201 |
+
stimulus/ (Group)
|
| 202 |
+
presentation/ (Group)
|
| 203 |
+
templates/ (Group)
|
| 204 |
+
timestamps_reference_time (object) (Dataset)
|
session_Experimenter_2_2023-02-20/experiment_2_LR/field_RGC1_structure.txt
ADDED
|
@@ -0,0 +1,224 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
NWB File Structure Report
|
| 2 |
+
========================
|
| 3 |
+
File: field_RGC1.nwb
|
| 4 |
+
Size: 25.44 MB
|
| 5 |
+
Generated: 2025-10-31 16:18:21
|
| 6 |
+
|
| 7 |
+
Structure:
|
| 8 |
+
----------
|
| 9 |
+
acquisition/ (Group)
|
| 10 |
+
TwoPhotonSeries_Cond_control_chirp_Pres_1/ (Group)
|
| 11 |
+
data (1456, 64, 64) (uint16) (Dataset)
|
| 12 |
+
imaging_plane/ (Group)
|
| 13 |
+
OpticalChannel/ (Group)
|
| 14 |
+
description (object) (Dataset)
|
| 15 |
+
emission_lambda (float64) (Dataset)
|
| 16 |
+
description (object) (Dataset)
|
| 17 |
+
device/ (Group)
|
| 18 |
+
excitation_lambda (float64) (Dataset)
|
| 19 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 20 |
+
imaging_rate (float64) (Dataset)
|
| 21 |
+
indicator (object) (Dataset)
|
| 22 |
+
location (object) (Dataset)
|
| 23 |
+
timestamps (1456,) (float64) (Dataset)
|
| 24 |
+
TwoPhotonSeries_Cond_control_movingbar_Pres_1/ (Group)
|
| 25 |
+
data (997, 64, 64) (uint16) (Dataset)
|
| 26 |
+
imaging_plane/ (Group)
|
| 27 |
+
OpticalChannel/ (Group)
|
| 28 |
+
description (object) (Dataset)
|
| 29 |
+
emission_lambda (float64) (Dataset)
|
| 30 |
+
description (object) (Dataset)
|
| 31 |
+
device/ (Group)
|
| 32 |
+
excitation_lambda (float64) (Dataset)
|
| 33 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 34 |
+
imaging_rate (float64) (Dataset)
|
| 35 |
+
indicator (object) (Dataset)
|
| 36 |
+
location (object) (Dataset)
|
| 37 |
+
timestamps (997,) (float64) (Dataset)
|
| 38 |
+
analysis/ (Group)
|
| 39 |
+
file_create_date (1,) (object) (Dataset)
|
| 40 |
+
general/ (Group)
|
| 41 |
+
devices/ (Group)
|
| 42 |
+
Microscope/ (Group)
|
| 43 |
+
experiment_metadata/ (Group)
|
| 44 |
+
experiment_number (object) (Dataset)
|
| 45 |
+
eye (object) (Dataset)
|
| 46 |
+
preparation_orientation (object) (Dataset)
|
| 47 |
+
setup_id (object) (Dataset)
|
| 48 |
+
experimenter (1,) (object) (Dataset)
|
| 49 |
+
institution (object) (Dataset)
|
| 50 |
+
lab (object) (Dataset)
|
| 51 |
+
optophysiology/ (Group)
|
| 52 |
+
ImagingPlane/ (Group)
|
| 53 |
+
OpticalChannel/ (Group)
|
| 54 |
+
description (object) (Dataset)
|
| 55 |
+
emission_lambda (float64) (Dataset)
|
| 56 |
+
description (object) (Dataset)
|
| 57 |
+
device/ (Group)
|
| 58 |
+
excitation_lambda (float64) (Dataset)
|
| 59 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 60 |
+
imaging_rate (float64) (Dataset)
|
| 61 |
+
indicator (object) (Dataset)
|
| 62 |
+
location (object) (Dataset)
|
| 63 |
+
related_publications (1,) (object) (Dataset)
|
| 64 |
+
subject/ (Group)
|
| 65 |
+
age (object) (Dataset)
|
| 66 |
+
date_of_birth (object) (Dataset)
|
| 67 |
+
genotype (object) (Dataset)
|
| 68 |
+
sex (object) (Dataset)
|
| 69 |
+
species (object) (Dataset)
|
| 70 |
+
identifier (object) (Dataset)
|
| 71 |
+
processing/ (Group)
|
| 72 |
+
Condition_control/ (Group)
|
| 73 |
+
cell_types/ (Group)
|
| 74 |
+
cluster_id (106,) (int64) (Dataset)
|
| 75 |
+
condition (106,) (object) (Dataset)
|
| 76 |
+
group_id (106,) (int64) (Dataset)
|
| 77 |
+
id (106,) (int64) (Dataset)
|
| 78 |
+
preproc_bar (106, 32) (float64) (Dataset)
|
| 79 |
+
preproc_chirp (106, 249) (float64) (Dataset)
|
| 80 |
+
prob_class (106,) (float64) (Dataset)
|
| 81 |
+
prob_cluster (106,) (float64) (Dataset)
|
| 82 |
+
prob_group (106,) (float64) (Dataset)
|
| 83 |
+
prob_supergroup (106,) (float64) (Dataset)
|
| 84 |
+
probs_per_cluster (106, 75) (float64) (Dataset)
|
| 85 |
+
roi_id (106,) (int64) (Dataset)
|
| 86 |
+
roi_table_link (106,) (int64) (Dataset)
|
| 87 |
+
supergroup (106,) (object) (Dataset)
|
| 88 |
+
chirp_60Hz_average/ (Group)
|
| 89 |
+
data (1982, 106) (float64) (Dataset)
|
| 90 |
+
timestamps (1982,) (float64) (Dataset)
|
| 91 |
+
chirp_8Hz_average/ (Group)
|
| 92 |
+
data (259, 106) (float64) (Dataset)
|
| 93 |
+
timestamps (259,) (float64) (Dataset)
|
| 94 |
+
chirp_features/ (Group)
|
| 95 |
+
chirp_on_off_index (106,) (float64) (Dataset)
|
| 96 |
+
chirp_pres_qidx (106,) (float64) (Dataset)
|
| 97 |
+
chirp_qidx (106,) (float64) (Dataset)
|
| 98 |
+
chirp_transience_index (106,) (float64) (Dataset)
|
| 99 |
+
id (106,) (int64) (Dataset)
|
| 100 |
+
roi_id (106,) (int64) (Dataset)
|
| 101 |
+
roi_table_link (106,) (int64) (Dataset)
|
| 102 |
+
chirp_preprocessed_traces/ (Group)
|
| 103 |
+
data (1456, 106) (float64) (Dataset)
|
| 104 |
+
timestamps (1456,) (float64) (Dataset)
|
| 105 |
+
chirp_snippets/ (Group)
|
| 106 |
+
data (259, 106, 5) (float64) (Dataset)
|
| 107 |
+
timestamps (259,) (float64) (Dataset)
|
| 108 |
+
chirp_snippets_t0/ (Group)
|
| 109 |
+
id (1,) (int64) (Dataset)
|
| 110 |
+
snippets_t0_array (1, 5, 106) (float64) (Dataset)
|
| 111 |
+
chirp_triggertimes_snippets/ (Group)
|
| 112 |
+
data (2, 106, 5) (float64) (Dataset)
|
| 113 |
+
starting_time (float64) (Dataset)
|
| 114 |
+
movingbar_features/ (Group)
|
| 115 |
+
bar_ds_index (106,) (float64) (Dataset)
|
| 116 |
+
bar_ds_pvalue (106,) (float64) (Dataset)
|
| 117 |
+
bar_os_index (106,) (float64) (Dataset)
|
| 118 |
+
bar_os_pvalue (106,) (float64) (Dataset)
|
| 119 |
+
bar_pref_dir (106,) (float64) (Dataset)
|
| 120 |
+
bar_pref_or (106,) (float64) (Dataset)
|
| 121 |
+
bar_pres_qidx (106,) (float64) (Dataset)
|
| 122 |
+
bar_qidx (106,) (float64) (Dataset)
|
| 123 |
+
id (106,) (int64) (Dataset)
|
| 124 |
+
roi_id (106,) (int64) (Dataset)
|
| 125 |
+
roi_table_link (106,) (int64) (Dataset)
|
| 126 |
+
movingbar_preprocessed_traces/ (Group)
|
| 127 |
+
data (997, 106) (float64) (Dataset)
|
| 128 |
+
timestamps (997,) (float64) (Dataset)
|
| 129 |
+
movingbar_snippets/ (Group)
|
| 130 |
+
data (33, 106, 24) (float32) (Dataset)
|
| 131 |
+
timestamps (33,) (float64) (Dataset)
|
| 132 |
+
movingbar_snippets_t0/ (Group)
|
| 133 |
+
id (1,) (int64) (Dataset)
|
| 134 |
+
snippets_t0_array (1, 24, 106) (float64) (Dataset)
|
| 135 |
+
movingbar_triggertimes_snippets/ (Group)
|
| 136 |
+
data (1, 106, 24) (float32) (Dataset)
|
| 137 |
+
starting_time (float64) (Dataset)
|
| 138 |
+
rois/ (Group)
|
| 139 |
+
ImageSegmentation/ (Group)
|
| 140 |
+
ROI masks/ (Group)
|
| 141 |
+
id (106,) (int64) (Dataset)
|
| 142 |
+
image_mask (106, 64, 64) (bool) (Dataset)
|
| 143 |
+
imaging_plane/ (Group)
|
| 144 |
+
OpticalChannel/ (Group)
|
| 145 |
+
description (object) (Dataset)
|
| 146 |
+
emission_lambda (float64) (Dataset)
|
| 147 |
+
description (object) (Dataset)
|
| 148 |
+
device/ (Group)
|
| 149 |
+
excitation_lambda (float64) (Dataset)
|
| 150 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 151 |
+
imaging_rate (float64) (Dataset)
|
| 152 |
+
indicator (object) (Dataset)
|
| 153 |
+
location (object) (Dataset)
|
| 154 |
+
nxpix (106,) (int64) (Dataset)
|
| 155 |
+
nypix (106,) (int64) (Dataset)
|
| 156 |
+
reference_images/ (Group)
|
| 157 |
+
roi_ids (106,) (int64) (Dataset)
|
| 158 |
+
roi_sizes (106,) (int64) (Dataset)
|
| 159 |
+
roi_sizes_um2 (106,) (float64) (Dataset)
|
| 160 |
+
session_info/ (Group)
|
| 161 |
+
presentation_sequence/ (Group)
|
| 162 |
+
absolute_start_time (2,) (object) (Dataset)
|
| 163 |
+
id (2,) (int64) (Dataset)
|
| 164 |
+
presentation_order (2,) (int64) (Dataset)
|
| 165 |
+
relative_start_time (2,) (float64) (Dataset)
|
| 166 |
+
stimulus_condition (2,) (object) (Dataset)
|
| 167 |
+
spatial/ (Group)
|
| 168 |
+
spatial_locations/ (Group)
|
| 169 |
+
field_temporal_nasal_pos_um (106,) (float64) (Dataset)
|
| 170 |
+
field_ventral_dorsal_pos_um (106,) (float64) (Dataset)
|
| 171 |
+
id (106,) (int64) (Dataset)
|
| 172 |
+
roi_id (106,) (int64) (Dataset)
|
| 173 |
+
roi_table_link (106,) (int64) (Dataset)
|
| 174 |
+
temporal_nasal_pos_um (106,) (float64) (Dataset)
|
| 175 |
+
ventral_dorsal_pos_um (106,) (float64) (Dataset)
|
| 176 |
+
session_description (object) (Dataset)
|
| 177 |
+
session_start_time (object) (Dataset)
|
| 178 |
+
specifications/ (Group)
|
| 179 |
+
core/ (Group)
|
| 180 |
+
2.8.0/ (Group)
|
| 181 |
+
namespace (object) (Dataset)
|
| 182 |
+
nwb.base (object) (Dataset)
|
| 183 |
+
nwb.behavior (object) (Dataset)
|
| 184 |
+
nwb.device (object) (Dataset)
|
| 185 |
+
nwb.ecephys (object) (Dataset)
|
| 186 |
+
nwb.epoch (object) (Dataset)
|
| 187 |
+
nwb.file (object) (Dataset)
|
| 188 |
+
nwb.icephys (object) (Dataset)
|
| 189 |
+
nwb.image (object) (Dataset)
|
| 190 |
+
nwb.misc (object) (Dataset)
|
| 191 |
+
nwb.ogen (object) (Dataset)
|
| 192 |
+
nwb.ophys (object) (Dataset)
|
| 193 |
+
nwb.retinotopy (object) (Dataset)
|
| 194 |
+
experiment-metadata/ (Group)
|
| 195 |
+
0.1.0/ (Group)
|
| 196 |
+
experiment_metadata.extensions (object) (Dataset)
|
| 197 |
+
namespace (object) (Dataset)
|
| 198 |
+
hdmf-common/ (Group)
|
| 199 |
+
1.8.0/ (Group)
|
| 200 |
+
base (object) (Dataset)
|
| 201 |
+
namespace (object) (Dataset)
|
| 202 |
+
sparse (object) (Dataset)
|
| 203 |
+
table (object) (Dataset)
|
| 204 |
+
hdmf-experimental/ (Group)
|
| 205 |
+
0.5.0/ (Group)
|
| 206 |
+
experimental (object) (Dataset)
|
| 207 |
+
namespace (object) (Dataset)
|
| 208 |
+
resources (object) (Dataset)
|
| 209 |
+
stimulus/ (Group)
|
| 210 |
+
presentation/ (Group)
|
| 211 |
+
chirp_stimulus/ (Group)
|
| 212 |
+
data (0, 0, 0) (uint8) (Dataset)
|
| 213 |
+
dimension (2,) (int64) (Dataset)
|
| 214 |
+
external_file (1,) (object) (Dataset)
|
| 215 |
+
format (object) (Dataset)
|
| 216 |
+
starting_time (float64) (Dataset)
|
| 217 |
+
movingbar_stimulus/ (Group)
|
| 218 |
+
data (0, 0, 0) (uint8) (Dataset)
|
| 219 |
+
dimension (2,) (int64) (Dataset)
|
| 220 |
+
external_file (1,) (object) (Dataset)
|
| 221 |
+
format (object) (Dataset)
|
| 222 |
+
starting_time (float64) (Dataset)
|
| 223 |
+
templates/ (Group)
|
| 224 |
+
timestamps_reference_time (object) (Dataset)
|
session_Experimenter_2_2023-02-20/experiment_2_LR/field_RGC2_structure.txt
ADDED
|
@@ -0,0 +1,224 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
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|
|
|
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|
|
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|
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|
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|
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|
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|
|
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|
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|
|
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|
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|
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|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
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|
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|
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|
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|
|
| 1 |
+
NWB File Structure Report
|
| 2 |
+
========================
|
| 3 |
+
File: field_RGC2.nwb
|
| 4 |
+
Size: 27.62 MB
|
| 5 |
+
Generated: 2025-10-31 16:18:24
|
| 6 |
+
|
| 7 |
+
Structure:
|
| 8 |
+
----------
|
| 9 |
+
acquisition/ (Group)
|
| 10 |
+
TwoPhotonSeries_Cond_control_chirp_Pres_1/ (Group)
|
| 11 |
+
data (1779, 64, 64) (uint16) (Dataset)
|
| 12 |
+
imaging_plane/ (Group)
|
| 13 |
+
OpticalChannel/ (Group)
|
| 14 |
+
description (object) (Dataset)
|
| 15 |
+
emission_lambda (float64) (Dataset)
|
| 16 |
+
description (object) (Dataset)
|
| 17 |
+
device/ (Group)
|
| 18 |
+
excitation_lambda (float64) (Dataset)
|
| 19 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 20 |
+
imaging_rate (float64) (Dataset)
|
| 21 |
+
indicator (object) (Dataset)
|
| 22 |
+
location (object) (Dataset)
|
| 23 |
+
timestamps (1779,) (float64) (Dataset)
|
| 24 |
+
TwoPhotonSeries_Cond_control_movingbar_Pres_1/ (Group)
|
| 25 |
+
data (939, 64, 64) (uint16) (Dataset)
|
| 26 |
+
imaging_plane/ (Group)
|
| 27 |
+
OpticalChannel/ (Group)
|
| 28 |
+
description (object) (Dataset)
|
| 29 |
+
emission_lambda (float64) (Dataset)
|
| 30 |
+
description (object) (Dataset)
|
| 31 |
+
device/ (Group)
|
| 32 |
+
excitation_lambda (float64) (Dataset)
|
| 33 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 34 |
+
imaging_rate (float64) (Dataset)
|
| 35 |
+
indicator (object) (Dataset)
|
| 36 |
+
location (object) (Dataset)
|
| 37 |
+
timestamps (939,) (float64) (Dataset)
|
| 38 |
+
analysis/ (Group)
|
| 39 |
+
file_create_date (1,) (object) (Dataset)
|
| 40 |
+
general/ (Group)
|
| 41 |
+
devices/ (Group)
|
| 42 |
+
Microscope/ (Group)
|
| 43 |
+
experiment_metadata/ (Group)
|
| 44 |
+
experiment_number (object) (Dataset)
|
| 45 |
+
eye (object) (Dataset)
|
| 46 |
+
preparation_orientation (object) (Dataset)
|
| 47 |
+
setup_id (object) (Dataset)
|
| 48 |
+
experimenter (1,) (object) (Dataset)
|
| 49 |
+
institution (object) (Dataset)
|
| 50 |
+
lab (object) (Dataset)
|
| 51 |
+
optophysiology/ (Group)
|
| 52 |
+
ImagingPlane/ (Group)
|
| 53 |
+
OpticalChannel/ (Group)
|
| 54 |
+
description (object) (Dataset)
|
| 55 |
+
emission_lambda (float64) (Dataset)
|
| 56 |
+
description (object) (Dataset)
|
| 57 |
+
device/ (Group)
|
| 58 |
+
excitation_lambda (float64) (Dataset)
|
| 59 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 60 |
+
imaging_rate (float64) (Dataset)
|
| 61 |
+
indicator (object) (Dataset)
|
| 62 |
+
location (object) (Dataset)
|
| 63 |
+
related_publications (1,) (object) (Dataset)
|
| 64 |
+
subject/ (Group)
|
| 65 |
+
age (object) (Dataset)
|
| 66 |
+
date_of_birth (object) (Dataset)
|
| 67 |
+
genotype (object) (Dataset)
|
| 68 |
+
sex (object) (Dataset)
|
| 69 |
+
species (object) (Dataset)
|
| 70 |
+
identifier (object) (Dataset)
|
| 71 |
+
processing/ (Group)
|
| 72 |
+
Condition_control/ (Group)
|
| 73 |
+
cell_types/ (Group)
|
| 74 |
+
cluster_id (104,) (int64) (Dataset)
|
| 75 |
+
condition (104,) (object) (Dataset)
|
| 76 |
+
group_id (104,) (int64) (Dataset)
|
| 77 |
+
id (104,) (int64) (Dataset)
|
| 78 |
+
preproc_bar (104, 32) (float64) (Dataset)
|
| 79 |
+
preproc_chirp (104, 249) (float64) (Dataset)
|
| 80 |
+
prob_class (104,) (float64) (Dataset)
|
| 81 |
+
prob_cluster (104,) (float64) (Dataset)
|
| 82 |
+
prob_group (104,) (float64) (Dataset)
|
| 83 |
+
prob_supergroup (104,) (float64) (Dataset)
|
| 84 |
+
probs_per_cluster (104, 75) (float64) (Dataset)
|
| 85 |
+
roi_id (104,) (int64) (Dataset)
|
| 86 |
+
roi_table_link (104,) (int64) (Dataset)
|
| 87 |
+
supergroup (104,) (object) (Dataset)
|
| 88 |
+
chirp_60Hz_average/ (Group)
|
| 89 |
+
data (1982, 104) (float64) (Dataset)
|
| 90 |
+
timestamps (1982,) (float64) (Dataset)
|
| 91 |
+
chirp_8Hz_average/ (Group)
|
| 92 |
+
data (259, 104) (float64) (Dataset)
|
| 93 |
+
timestamps (259,) (float64) (Dataset)
|
| 94 |
+
chirp_features/ (Group)
|
| 95 |
+
chirp_on_off_index (104,) (float64) (Dataset)
|
| 96 |
+
chirp_pres_qidx (104,) (float64) (Dataset)
|
| 97 |
+
chirp_qidx (104,) (float64) (Dataset)
|
| 98 |
+
chirp_transience_index (104,) (float64) (Dataset)
|
| 99 |
+
id (104,) (int64) (Dataset)
|
| 100 |
+
roi_id (104,) (int64) (Dataset)
|
| 101 |
+
roi_table_link (104,) (int64) (Dataset)
|
| 102 |
+
chirp_preprocessed_traces/ (Group)
|
| 103 |
+
data (1779, 104) (float64) (Dataset)
|
| 104 |
+
timestamps (1779,) (float64) (Dataset)
|
| 105 |
+
chirp_snippets/ (Group)
|
| 106 |
+
data (259, 104, 5) (float64) (Dataset)
|
| 107 |
+
timestamps (259,) (float64) (Dataset)
|
| 108 |
+
chirp_snippets_t0/ (Group)
|
| 109 |
+
id (1,) (int64) (Dataset)
|
| 110 |
+
snippets_t0_array (1, 5, 104) (float64) (Dataset)
|
| 111 |
+
chirp_triggertimes_snippets/ (Group)
|
| 112 |
+
data (2, 104, 5) (float64) (Dataset)
|
| 113 |
+
starting_time (float64) (Dataset)
|
| 114 |
+
movingbar_features/ (Group)
|
| 115 |
+
bar_ds_index (104,) (float64) (Dataset)
|
| 116 |
+
bar_ds_pvalue (104,) (float64) (Dataset)
|
| 117 |
+
bar_os_index (104,) (float64) (Dataset)
|
| 118 |
+
bar_os_pvalue (104,) (float64) (Dataset)
|
| 119 |
+
bar_pref_dir (104,) (float64) (Dataset)
|
| 120 |
+
bar_pref_or (104,) (float64) (Dataset)
|
| 121 |
+
bar_pres_qidx (104,) (float64) (Dataset)
|
| 122 |
+
bar_qidx (104,) (float64) (Dataset)
|
| 123 |
+
id (104,) (int64) (Dataset)
|
| 124 |
+
roi_id (104,) (int64) (Dataset)
|
| 125 |
+
roi_table_link (104,) (int64) (Dataset)
|
| 126 |
+
movingbar_preprocessed_traces/ (Group)
|
| 127 |
+
data (939, 104) (float64) (Dataset)
|
| 128 |
+
timestamps (939,) (float64) (Dataset)
|
| 129 |
+
movingbar_snippets/ (Group)
|
| 130 |
+
data (33, 104, 24) (float32) (Dataset)
|
| 131 |
+
timestamps (33,) (float64) (Dataset)
|
| 132 |
+
movingbar_snippets_t0/ (Group)
|
| 133 |
+
id (1,) (int64) (Dataset)
|
| 134 |
+
snippets_t0_array (1, 24, 104) (float64) (Dataset)
|
| 135 |
+
movingbar_triggertimes_snippets/ (Group)
|
| 136 |
+
data (1, 104, 24) (float32) (Dataset)
|
| 137 |
+
starting_time (float64) (Dataset)
|
| 138 |
+
rois/ (Group)
|
| 139 |
+
ImageSegmentation/ (Group)
|
| 140 |
+
ROI masks/ (Group)
|
| 141 |
+
id (104,) (int64) (Dataset)
|
| 142 |
+
image_mask (104, 64, 64) (bool) (Dataset)
|
| 143 |
+
imaging_plane/ (Group)
|
| 144 |
+
OpticalChannel/ (Group)
|
| 145 |
+
description (object) (Dataset)
|
| 146 |
+
emission_lambda (float64) (Dataset)
|
| 147 |
+
description (object) (Dataset)
|
| 148 |
+
device/ (Group)
|
| 149 |
+
excitation_lambda (float64) (Dataset)
|
| 150 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 151 |
+
imaging_rate (float64) (Dataset)
|
| 152 |
+
indicator (object) (Dataset)
|
| 153 |
+
location (object) (Dataset)
|
| 154 |
+
nxpix (104,) (int64) (Dataset)
|
| 155 |
+
nypix (104,) (int64) (Dataset)
|
| 156 |
+
reference_images/ (Group)
|
| 157 |
+
roi_ids (104,) (int64) (Dataset)
|
| 158 |
+
roi_sizes (104,) (int64) (Dataset)
|
| 159 |
+
roi_sizes_um2 (104,) (float64) (Dataset)
|
| 160 |
+
session_info/ (Group)
|
| 161 |
+
presentation_sequence/ (Group)
|
| 162 |
+
absolute_start_time (2,) (object) (Dataset)
|
| 163 |
+
id (2,) (int64) (Dataset)
|
| 164 |
+
presentation_order (2,) (int64) (Dataset)
|
| 165 |
+
relative_start_time (2,) (float64) (Dataset)
|
| 166 |
+
stimulus_condition (2,) (object) (Dataset)
|
| 167 |
+
spatial/ (Group)
|
| 168 |
+
spatial_locations/ (Group)
|
| 169 |
+
field_temporal_nasal_pos_um (104,) (float64) (Dataset)
|
| 170 |
+
field_ventral_dorsal_pos_um (104,) (float64) (Dataset)
|
| 171 |
+
id (104,) (int64) (Dataset)
|
| 172 |
+
roi_id (104,) (int64) (Dataset)
|
| 173 |
+
roi_table_link (104,) (int64) (Dataset)
|
| 174 |
+
temporal_nasal_pos_um (104,) (float64) (Dataset)
|
| 175 |
+
ventral_dorsal_pos_um (104,) (float64) (Dataset)
|
| 176 |
+
session_description (object) (Dataset)
|
| 177 |
+
session_start_time (object) (Dataset)
|
| 178 |
+
specifications/ (Group)
|
| 179 |
+
core/ (Group)
|
| 180 |
+
2.8.0/ (Group)
|
| 181 |
+
namespace (object) (Dataset)
|
| 182 |
+
nwb.base (object) (Dataset)
|
| 183 |
+
nwb.behavior (object) (Dataset)
|
| 184 |
+
nwb.device (object) (Dataset)
|
| 185 |
+
nwb.ecephys (object) (Dataset)
|
| 186 |
+
nwb.epoch (object) (Dataset)
|
| 187 |
+
nwb.file (object) (Dataset)
|
| 188 |
+
nwb.icephys (object) (Dataset)
|
| 189 |
+
nwb.image (object) (Dataset)
|
| 190 |
+
nwb.misc (object) (Dataset)
|
| 191 |
+
nwb.ogen (object) (Dataset)
|
| 192 |
+
nwb.ophys (object) (Dataset)
|
| 193 |
+
nwb.retinotopy (object) (Dataset)
|
| 194 |
+
experiment-metadata/ (Group)
|
| 195 |
+
0.1.0/ (Group)
|
| 196 |
+
experiment_metadata.extensions (object) (Dataset)
|
| 197 |
+
namespace (object) (Dataset)
|
| 198 |
+
hdmf-common/ (Group)
|
| 199 |
+
1.8.0/ (Group)
|
| 200 |
+
base (object) (Dataset)
|
| 201 |
+
namespace (object) (Dataset)
|
| 202 |
+
sparse (object) (Dataset)
|
| 203 |
+
table (object) (Dataset)
|
| 204 |
+
hdmf-experimental/ (Group)
|
| 205 |
+
0.5.0/ (Group)
|
| 206 |
+
experimental (object) (Dataset)
|
| 207 |
+
namespace (object) (Dataset)
|
| 208 |
+
resources (object) (Dataset)
|
| 209 |
+
stimulus/ (Group)
|
| 210 |
+
presentation/ (Group)
|
| 211 |
+
chirp_stimulus/ (Group)
|
| 212 |
+
data (0, 0, 0) (uint8) (Dataset)
|
| 213 |
+
dimension (2,) (int64) (Dataset)
|
| 214 |
+
external_file (1,) (object) (Dataset)
|
| 215 |
+
format (object) (Dataset)
|
| 216 |
+
starting_time (float64) (Dataset)
|
| 217 |
+
movingbar_stimulus/ (Group)
|
| 218 |
+
data (0, 0, 0) (uint8) (Dataset)
|
| 219 |
+
dimension (2,) (int64) (Dataset)
|
| 220 |
+
external_file (1,) (object) (Dataset)
|
| 221 |
+
format (object) (Dataset)
|
| 222 |
+
starting_time (float64) (Dataset)
|
| 223 |
+
templates/ (Group)
|
| 224 |
+
timestamps_reference_time (object) (Dataset)
|
session_Experimenter_2_2023-02-20/experiment_2_LR/field_RGC4_structure.txt
ADDED
|
@@ -0,0 +1,224 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
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|
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|
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|
|
|
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|
|
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|
|
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|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
NWB File Structure Report
|
| 2 |
+
========================
|
| 3 |
+
File: field_RGC4.nwb
|
| 4 |
+
Size: 26.75 MB
|
| 5 |
+
Generated: 2025-10-31 16:18:28
|
| 6 |
+
|
| 7 |
+
Structure:
|
| 8 |
+
----------
|
| 9 |
+
acquisition/ (Group)
|
| 10 |
+
TwoPhotonSeries_Cond_control_chirp_Pres_1/ (Group)
|
| 11 |
+
data (1483, 64, 64) (uint16) (Dataset)
|
| 12 |
+
imaging_plane/ (Group)
|
| 13 |
+
OpticalChannel/ (Group)
|
| 14 |
+
description (object) (Dataset)
|
| 15 |
+
emission_lambda (float64) (Dataset)
|
| 16 |
+
description (object) (Dataset)
|
| 17 |
+
device/ (Group)
|
| 18 |
+
excitation_lambda (float64) (Dataset)
|
| 19 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 20 |
+
imaging_rate (float64) (Dataset)
|
| 21 |
+
indicator (object) (Dataset)
|
| 22 |
+
location (object) (Dataset)
|
| 23 |
+
timestamps (1483,) (float64) (Dataset)
|
| 24 |
+
TwoPhotonSeries_Cond_control_movingbar_Pres_1/ (Group)
|
| 25 |
+
data (1030, 64, 64) (uint16) (Dataset)
|
| 26 |
+
imaging_plane/ (Group)
|
| 27 |
+
OpticalChannel/ (Group)
|
| 28 |
+
description (object) (Dataset)
|
| 29 |
+
emission_lambda (float64) (Dataset)
|
| 30 |
+
description (object) (Dataset)
|
| 31 |
+
device/ (Group)
|
| 32 |
+
excitation_lambda (float64) (Dataset)
|
| 33 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 34 |
+
imaging_rate (float64) (Dataset)
|
| 35 |
+
indicator (object) (Dataset)
|
| 36 |
+
location (object) (Dataset)
|
| 37 |
+
timestamps (1030,) (float64) (Dataset)
|
| 38 |
+
analysis/ (Group)
|
| 39 |
+
file_create_date (1,) (object) (Dataset)
|
| 40 |
+
general/ (Group)
|
| 41 |
+
devices/ (Group)
|
| 42 |
+
Microscope/ (Group)
|
| 43 |
+
experiment_metadata/ (Group)
|
| 44 |
+
experiment_number (object) (Dataset)
|
| 45 |
+
eye (object) (Dataset)
|
| 46 |
+
preparation_orientation (object) (Dataset)
|
| 47 |
+
setup_id (object) (Dataset)
|
| 48 |
+
experimenter (1,) (object) (Dataset)
|
| 49 |
+
institution (object) (Dataset)
|
| 50 |
+
lab (object) (Dataset)
|
| 51 |
+
optophysiology/ (Group)
|
| 52 |
+
ImagingPlane/ (Group)
|
| 53 |
+
OpticalChannel/ (Group)
|
| 54 |
+
description (object) (Dataset)
|
| 55 |
+
emission_lambda (float64) (Dataset)
|
| 56 |
+
description (object) (Dataset)
|
| 57 |
+
device/ (Group)
|
| 58 |
+
excitation_lambda (float64) (Dataset)
|
| 59 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 60 |
+
imaging_rate (float64) (Dataset)
|
| 61 |
+
indicator (object) (Dataset)
|
| 62 |
+
location (object) (Dataset)
|
| 63 |
+
related_publications (1,) (object) (Dataset)
|
| 64 |
+
subject/ (Group)
|
| 65 |
+
age (object) (Dataset)
|
| 66 |
+
date_of_birth (object) (Dataset)
|
| 67 |
+
genotype (object) (Dataset)
|
| 68 |
+
sex (object) (Dataset)
|
| 69 |
+
species (object) (Dataset)
|
| 70 |
+
identifier (object) (Dataset)
|
| 71 |
+
processing/ (Group)
|
| 72 |
+
Condition_control/ (Group)
|
| 73 |
+
cell_types/ (Group)
|
| 74 |
+
cluster_id (120,) (int64) (Dataset)
|
| 75 |
+
condition (120,) (object) (Dataset)
|
| 76 |
+
group_id (120,) (int64) (Dataset)
|
| 77 |
+
id (120,) (int64) (Dataset)
|
| 78 |
+
preproc_bar (120, 32) (float64) (Dataset)
|
| 79 |
+
preproc_chirp (120, 249) (float64) (Dataset)
|
| 80 |
+
prob_class (120,) (float64) (Dataset)
|
| 81 |
+
prob_cluster (120,) (float64) (Dataset)
|
| 82 |
+
prob_group (120,) (float64) (Dataset)
|
| 83 |
+
prob_supergroup (120,) (float64) (Dataset)
|
| 84 |
+
probs_per_cluster (120, 75) (float64) (Dataset)
|
| 85 |
+
roi_id (120,) (int64) (Dataset)
|
| 86 |
+
roi_table_link (120,) (int64) (Dataset)
|
| 87 |
+
supergroup (120,) (object) (Dataset)
|
| 88 |
+
chirp_60Hz_average/ (Group)
|
| 89 |
+
data (1982, 120) (float64) (Dataset)
|
| 90 |
+
timestamps (1982,) (float64) (Dataset)
|
| 91 |
+
chirp_8Hz_average/ (Group)
|
| 92 |
+
data (259, 120) (float64) (Dataset)
|
| 93 |
+
timestamps (259,) (float64) (Dataset)
|
| 94 |
+
chirp_features/ (Group)
|
| 95 |
+
chirp_on_off_index (120,) (float64) (Dataset)
|
| 96 |
+
chirp_pres_qidx (120,) (float64) (Dataset)
|
| 97 |
+
chirp_qidx (120,) (float64) (Dataset)
|
| 98 |
+
chirp_transience_index (120,) (float64) (Dataset)
|
| 99 |
+
id (120,) (int64) (Dataset)
|
| 100 |
+
roi_id (120,) (int64) (Dataset)
|
| 101 |
+
roi_table_link (120,) (int64) (Dataset)
|
| 102 |
+
chirp_preprocessed_traces/ (Group)
|
| 103 |
+
data (1483, 120) (float64) (Dataset)
|
| 104 |
+
timestamps (1483,) (float64) (Dataset)
|
| 105 |
+
chirp_snippets/ (Group)
|
| 106 |
+
data (259, 120, 5) (float64) (Dataset)
|
| 107 |
+
timestamps (259,) (float64) (Dataset)
|
| 108 |
+
chirp_snippets_t0/ (Group)
|
| 109 |
+
id (1,) (int64) (Dataset)
|
| 110 |
+
snippets_t0_array (1, 5, 120) (float64) (Dataset)
|
| 111 |
+
chirp_triggertimes_snippets/ (Group)
|
| 112 |
+
data (2, 120, 5) (float64) (Dataset)
|
| 113 |
+
starting_time (float64) (Dataset)
|
| 114 |
+
movingbar_features/ (Group)
|
| 115 |
+
bar_ds_index (120,) (float64) (Dataset)
|
| 116 |
+
bar_ds_pvalue (120,) (float64) (Dataset)
|
| 117 |
+
bar_os_index (120,) (float64) (Dataset)
|
| 118 |
+
bar_os_pvalue (120,) (float64) (Dataset)
|
| 119 |
+
bar_pref_dir (120,) (float64) (Dataset)
|
| 120 |
+
bar_pref_or (120,) (float64) (Dataset)
|
| 121 |
+
bar_pres_qidx (120,) (float64) (Dataset)
|
| 122 |
+
bar_qidx (120,) (float64) (Dataset)
|
| 123 |
+
id (120,) (int64) (Dataset)
|
| 124 |
+
roi_id (120,) (int64) (Dataset)
|
| 125 |
+
roi_table_link (120,) (int64) (Dataset)
|
| 126 |
+
movingbar_preprocessed_traces/ (Group)
|
| 127 |
+
data (1030, 120) (float64) (Dataset)
|
| 128 |
+
timestamps (1030,) (float64) (Dataset)
|
| 129 |
+
movingbar_snippets/ (Group)
|
| 130 |
+
data (33, 120, 24) (float32) (Dataset)
|
| 131 |
+
timestamps (33,) (float64) (Dataset)
|
| 132 |
+
movingbar_snippets_t0/ (Group)
|
| 133 |
+
id (1,) (int64) (Dataset)
|
| 134 |
+
snippets_t0_array (1, 24, 120) (float64) (Dataset)
|
| 135 |
+
movingbar_triggertimes_snippets/ (Group)
|
| 136 |
+
data (1, 120, 24) (float32) (Dataset)
|
| 137 |
+
starting_time (float64) (Dataset)
|
| 138 |
+
rois/ (Group)
|
| 139 |
+
ImageSegmentation/ (Group)
|
| 140 |
+
ROI masks/ (Group)
|
| 141 |
+
id (120,) (int64) (Dataset)
|
| 142 |
+
image_mask (120, 64, 64) (bool) (Dataset)
|
| 143 |
+
imaging_plane/ (Group)
|
| 144 |
+
OpticalChannel/ (Group)
|
| 145 |
+
description (object) (Dataset)
|
| 146 |
+
emission_lambda (float64) (Dataset)
|
| 147 |
+
description (object) (Dataset)
|
| 148 |
+
device/ (Group)
|
| 149 |
+
excitation_lambda (float64) (Dataset)
|
| 150 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 151 |
+
imaging_rate (float64) (Dataset)
|
| 152 |
+
indicator (object) (Dataset)
|
| 153 |
+
location (object) (Dataset)
|
| 154 |
+
nxpix (120,) (int64) (Dataset)
|
| 155 |
+
nypix (120,) (int64) (Dataset)
|
| 156 |
+
reference_images/ (Group)
|
| 157 |
+
roi_ids (120,) (int64) (Dataset)
|
| 158 |
+
roi_sizes (120,) (int64) (Dataset)
|
| 159 |
+
roi_sizes_um2 (120,) (float64) (Dataset)
|
| 160 |
+
session_info/ (Group)
|
| 161 |
+
presentation_sequence/ (Group)
|
| 162 |
+
absolute_start_time (2,) (object) (Dataset)
|
| 163 |
+
id (2,) (int64) (Dataset)
|
| 164 |
+
presentation_order (2,) (int64) (Dataset)
|
| 165 |
+
relative_start_time (2,) (float64) (Dataset)
|
| 166 |
+
stimulus_condition (2,) (object) (Dataset)
|
| 167 |
+
spatial/ (Group)
|
| 168 |
+
spatial_locations/ (Group)
|
| 169 |
+
field_temporal_nasal_pos_um (120,) (float64) (Dataset)
|
| 170 |
+
field_ventral_dorsal_pos_um (120,) (float64) (Dataset)
|
| 171 |
+
id (120,) (int64) (Dataset)
|
| 172 |
+
roi_id (120,) (int64) (Dataset)
|
| 173 |
+
roi_table_link (120,) (int64) (Dataset)
|
| 174 |
+
temporal_nasal_pos_um (120,) (float64) (Dataset)
|
| 175 |
+
ventral_dorsal_pos_um (120,) (float64) (Dataset)
|
| 176 |
+
session_description (object) (Dataset)
|
| 177 |
+
session_start_time (object) (Dataset)
|
| 178 |
+
specifications/ (Group)
|
| 179 |
+
core/ (Group)
|
| 180 |
+
2.8.0/ (Group)
|
| 181 |
+
namespace (object) (Dataset)
|
| 182 |
+
nwb.base (object) (Dataset)
|
| 183 |
+
nwb.behavior (object) (Dataset)
|
| 184 |
+
nwb.device (object) (Dataset)
|
| 185 |
+
nwb.ecephys (object) (Dataset)
|
| 186 |
+
nwb.epoch (object) (Dataset)
|
| 187 |
+
nwb.file (object) (Dataset)
|
| 188 |
+
nwb.icephys (object) (Dataset)
|
| 189 |
+
nwb.image (object) (Dataset)
|
| 190 |
+
nwb.misc (object) (Dataset)
|
| 191 |
+
nwb.ogen (object) (Dataset)
|
| 192 |
+
nwb.ophys (object) (Dataset)
|
| 193 |
+
nwb.retinotopy (object) (Dataset)
|
| 194 |
+
experiment-metadata/ (Group)
|
| 195 |
+
0.1.0/ (Group)
|
| 196 |
+
experiment_metadata.extensions (object) (Dataset)
|
| 197 |
+
namespace (object) (Dataset)
|
| 198 |
+
hdmf-common/ (Group)
|
| 199 |
+
1.8.0/ (Group)
|
| 200 |
+
base (object) (Dataset)
|
| 201 |
+
namespace (object) (Dataset)
|
| 202 |
+
sparse (object) (Dataset)
|
| 203 |
+
table (object) (Dataset)
|
| 204 |
+
hdmf-experimental/ (Group)
|
| 205 |
+
0.5.0/ (Group)
|
| 206 |
+
experimental (object) (Dataset)
|
| 207 |
+
namespace (object) (Dataset)
|
| 208 |
+
resources (object) (Dataset)
|
| 209 |
+
stimulus/ (Group)
|
| 210 |
+
presentation/ (Group)
|
| 211 |
+
chirp_stimulus/ (Group)
|
| 212 |
+
data (0, 0, 0) (uint8) (Dataset)
|
| 213 |
+
dimension (2,) (int64) (Dataset)
|
| 214 |
+
external_file (1,) (object) (Dataset)
|
| 215 |
+
format (object) (Dataset)
|
| 216 |
+
starting_time (float64) (Dataset)
|
| 217 |
+
movingbar_stimulus/ (Group)
|
| 218 |
+
data (0, 0, 0) (uint8) (Dataset)
|
| 219 |
+
dimension (2,) (int64) (Dataset)
|
| 220 |
+
external_file (1,) (object) (Dataset)
|
| 221 |
+
format (object) (Dataset)
|
| 222 |
+
starting_time (float64) (Dataset)
|
| 223 |
+
templates/ (Group)
|
| 224 |
+
timestamps_reference_time (object) (Dataset)
|
session_Experimenter_2_2023-02-20/experiment_2_LR/field_RGC5_structure.txt
ADDED
|
@@ -0,0 +1,224 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
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|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
NWB File Structure Report
|
| 2 |
+
========================
|
| 3 |
+
File: field_RGC5.nwb
|
| 4 |
+
Size: 27.29 MB
|
| 5 |
+
Generated: 2025-10-31 16:18:30
|
| 6 |
+
|
| 7 |
+
Structure:
|
| 8 |
+
----------
|
| 9 |
+
acquisition/ (Group)
|
| 10 |
+
TwoPhotonSeries_Cond_control_chirp_Pres_1/ (Group)
|
| 11 |
+
data (1488, 64, 64) (uint16) (Dataset)
|
| 12 |
+
imaging_plane/ (Group)
|
| 13 |
+
OpticalChannel/ (Group)
|
| 14 |
+
description (object) (Dataset)
|
| 15 |
+
emission_lambda (float64) (Dataset)
|
| 16 |
+
description (object) (Dataset)
|
| 17 |
+
device/ (Group)
|
| 18 |
+
excitation_lambda (float64) (Dataset)
|
| 19 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 20 |
+
imaging_rate (float64) (Dataset)
|
| 21 |
+
indicator (object) (Dataset)
|
| 22 |
+
location (object) (Dataset)
|
| 23 |
+
timestamps (1488,) (float64) (Dataset)
|
| 24 |
+
TwoPhotonSeries_Cond_control_movingbar_Pres_1/ (Group)
|
| 25 |
+
data (1172, 64, 64) (uint16) (Dataset)
|
| 26 |
+
imaging_plane/ (Group)
|
| 27 |
+
OpticalChannel/ (Group)
|
| 28 |
+
description (object) (Dataset)
|
| 29 |
+
emission_lambda (float64) (Dataset)
|
| 30 |
+
description (object) (Dataset)
|
| 31 |
+
device/ (Group)
|
| 32 |
+
excitation_lambda (float64) (Dataset)
|
| 33 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 34 |
+
imaging_rate (float64) (Dataset)
|
| 35 |
+
indicator (object) (Dataset)
|
| 36 |
+
location (object) (Dataset)
|
| 37 |
+
timestamps (1172,) (float64) (Dataset)
|
| 38 |
+
analysis/ (Group)
|
| 39 |
+
file_create_date (1,) (object) (Dataset)
|
| 40 |
+
general/ (Group)
|
| 41 |
+
devices/ (Group)
|
| 42 |
+
Microscope/ (Group)
|
| 43 |
+
experiment_metadata/ (Group)
|
| 44 |
+
experiment_number (object) (Dataset)
|
| 45 |
+
eye (object) (Dataset)
|
| 46 |
+
preparation_orientation (object) (Dataset)
|
| 47 |
+
setup_id (object) (Dataset)
|
| 48 |
+
experimenter (1,) (object) (Dataset)
|
| 49 |
+
institution (object) (Dataset)
|
| 50 |
+
lab (object) (Dataset)
|
| 51 |
+
optophysiology/ (Group)
|
| 52 |
+
ImagingPlane/ (Group)
|
| 53 |
+
OpticalChannel/ (Group)
|
| 54 |
+
description (object) (Dataset)
|
| 55 |
+
emission_lambda (float64) (Dataset)
|
| 56 |
+
description (object) (Dataset)
|
| 57 |
+
device/ (Group)
|
| 58 |
+
excitation_lambda (float64) (Dataset)
|
| 59 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 60 |
+
imaging_rate (float64) (Dataset)
|
| 61 |
+
indicator (object) (Dataset)
|
| 62 |
+
location (object) (Dataset)
|
| 63 |
+
related_publications (1,) (object) (Dataset)
|
| 64 |
+
subject/ (Group)
|
| 65 |
+
age (object) (Dataset)
|
| 66 |
+
date_of_birth (object) (Dataset)
|
| 67 |
+
genotype (object) (Dataset)
|
| 68 |
+
sex (object) (Dataset)
|
| 69 |
+
species (object) (Dataset)
|
| 70 |
+
identifier (object) (Dataset)
|
| 71 |
+
processing/ (Group)
|
| 72 |
+
Condition_control/ (Group)
|
| 73 |
+
cell_types/ (Group)
|
| 74 |
+
cluster_id (107,) (int64) (Dataset)
|
| 75 |
+
condition (107,) (object) (Dataset)
|
| 76 |
+
group_id (107,) (int64) (Dataset)
|
| 77 |
+
id (107,) (int64) (Dataset)
|
| 78 |
+
preproc_bar (107, 32) (float64) (Dataset)
|
| 79 |
+
preproc_chirp (107, 249) (float64) (Dataset)
|
| 80 |
+
prob_class (107,) (float64) (Dataset)
|
| 81 |
+
prob_cluster (107,) (float64) (Dataset)
|
| 82 |
+
prob_group (107,) (float64) (Dataset)
|
| 83 |
+
prob_supergroup (107,) (float64) (Dataset)
|
| 84 |
+
probs_per_cluster (107, 75) (float64) (Dataset)
|
| 85 |
+
roi_id (107,) (int64) (Dataset)
|
| 86 |
+
roi_table_link (107,) (int64) (Dataset)
|
| 87 |
+
supergroup (107,) (object) (Dataset)
|
| 88 |
+
chirp_60Hz_average/ (Group)
|
| 89 |
+
data (1982, 107) (float64) (Dataset)
|
| 90 |
+
timestamps (1982,) (float64) (Dataset)
|
| 91 |
+
chirp_8Hz_average/ (Group)
|
| 92 |
+
data (259, 107) (float64) (Dataset)
|
| 93 |
+
timestamps (259,) (float64) (Dataset)
|
| 94 |
+
chirp_features/ (Group)
|
| 95 |
+
chirp_on_off_index (107,) (float64) (Dataset)
|
| 96 |
+
chirp_pres_qidx (107,) (float64) (Dataset)
|
| 97 |
+
chirp_qidx (107,) (float64) (Dataset)
|
| 98 |
+
chirp_transience_index (107,) (float64) (Dataset)
|
| 99 |
+
id (107,) (int64) (Dataset)
|
| 100 |
+
roi_id (107,) (int64) (Dataset)
|
| 101 |
+
roi_table_link (107,) (int64) (Dataset)
|
| 102 |
+
chirp_preprocessed_traces/ (Group)
|
| 103 |
+
data (1488, 107) (float64) (Dataset)
|
| 104 |
+
timestamps (1488,) (float64) (Dataset)
|
| 105 |
+
chirp_snippets/ (Group)
|
| 106 |
+
data (259, 107, 5) (float64) (Dataset)
|
| 107 |
+
timestamps (259,) (float64) (Dataset)
|
| 108 |
+
chirp_snippets_t0/ (Group)
|
| 109 |
+
id (1,) (int64) (Dataset)
|
| 110 |
+
snippets_t0_array (1, 5, 107) (float64) (Dataset)
|
| 111 |
+
chirp_triggertimes_snippets/ (Group)
|
| 112 |
+
data (2, 107, 5) (float64) (Dataset)
|
| 113 |
+
starting_time (float64) (Dataset)
|
| 114 |
+
movingbar_features/ (Group)
|
| 115 |
+
bar_ds_index (107,) (float64) (Dataset)
|
| 116 |
+
bar_ds_pvalue (107,) (float64) (Dataset)
|
| 117 |
+
bar_os_index (107,) (float64) (Dataset)
|
| 118 |
+
bar_os_pvalue (107,) (float64) (Dataset)
|
| 119 |
+
bar_pref_dir (107,) (float64) (Dataset)
|
| 120 |
+
bar_pref_or (107,) (float64) (Dataset)
|
| 121 |
+
bar_pres_qidx (107,) (float64) (Dataset)
|
| 122 |
+
bar_qidx (107,) (float64) (Dataset)
|
| 123 |
+
id (107,) (int64) (Dataset)
|
| 124 |
+
roi_id (107,) (int64) (Dataset)
|
| 125 |
+
roi_table_link (107,) (int64) (Dataset)
|
| 126 |
+
movingbar_preprocessed_traces/ (Group)
|
| 127 |
+
data (1172, 107) (float64) (Dataset)
|
| 128 |
+
timestamps (1172,) (float64) (Dataset)
|
| 129 |
+
movingbar_snippets/ (Group)
|
| 130 |
+
data (33, 107, 24) (float32) (Dataset)
|
| 131 |
+
timestamps (33,) (float64) (Dataset)
|
| 132 |
+
movingbar_snippets_t0/ (Group)
|
| 133 |
+
id (1,) (int64) (Dataset)
|
| 134 |
+
snippets_t0_array (1, 24, 107) (float64) (Dataset)
|
| 135 |
+
movingbar_triggertimes_snippets/ (Group)
|
| 136 |
+
data (1, 107, 24) (float32) (Dataset)
|
| 137 |
+
starting_time (float64) (Dataset)
|
| 138 |
+
rois/ (Group)
|
| 139 |
+
ImageSegmentation/ (Group)
|
| 140 |
+
ROI masks/ (Group)
|
| 141 |
+
id (107,) (int64) (Dataset)
|
| 142 |
+
image_mask (107, 64, 64) (bool) (Dataset)
|
| 143 |
+
imaging_plane/ (Group)
|
| 144 |
+
OpticalChannel/ (Group)
|
| 145 |
+
description (object) (Dataset)
|
| 146 |
+
emission_lambda (float64) (Dataset)
|
| 147 |
+
description (object) (Dataset)
|
| 148 |
+
device/ (Group)
|
| 149 |
+
excitation_lambda (float64) (Dataset)
|
| 150 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 151 |
+
imaging_rate (float64) (Dataset)
|
| 152 |
+
indicator (object) (Dataset)
|
| 153 |
+
location (object) (Dataset)
|
| 154 |
+
nxpix (107,) (int64) (Dataset)
|
| 155 |
+
nypix (107,) (int64) (Dataset)
|
| 156 |
+
reference_images/ (Group)
|
| 157 |
+
roi_ids (107,) (int64) (Dataset)
|
| 158 |
+
roi_sizes (107,) (int64) (Dataset)
|
| 159 |
+
roi_sizes_um2 (107,) (float64) (Dataset)
|
| 160 |
+
session_info/ (Group)
|
| 161 |
+
presentation_sequence/ (Group)
|
| 162 |
+
absolute_start_time (2,) (object) (Dataset)
|
| 163 |
+
id (2,) (int64) (Dataset)
|
| 164 |
+
presentation_order (2,) (int64) (Dataset)
|
| 165 |
+
relative_start_time (2,) (float64) (Dataset)
|
| 166 |
+
stimulus_condition (2,) (object) (Dataset)
|
| 167 |
+
spatial/ (Group)
|
| 168 |
+
spatial_locations/ (Group)
|
| 169 |
+
field_temporal_nasal_pos_um (107,) (float64) (Dataset)
|
| 170 |
+
field_ventral_dorsal_pos_um (107,) (float64) (Dataset)
|
| 171 |
+
id (107,) (int64) (Dataset)
|
| 172 |
+
roi_id (107,) (int64) (Dataset)
|
| 173 |
+
roi_table_link (107,) (int64) (Dataset)
|
| 174 |
+
temporal_nasal_pos_um (107,) (float64) (Dataset)
|
| 175 |
+
ventral_dorsal_pos_um (107,) (float64) (Dataset)
|
| 176 |
+
session_description (object) (Dataset)
|
| 177 |
+
session_start_time (object) (Dataset)
|
| 178 |
+
specifications/ (Group)
|
| 179 |
+
core/ (Group)
|
| 180 |
+
2.8.0/ (Group)
|
| 181 |
+
namespace (object) (Dataset)
|
| 182 |
+
nwb.base (object) (Dataset)
|
| 183 |
+
nwb.behavior (object) (Dataset)
|
| 184 |
+
nwb.device (object) (Dataset)
|
| 185 |
+
nwb.ecephys (object) (Dataset)
|
| 186 |
+
nwb.epoch (object) (Dataset)
|
| 187 |
+
nwb.file (object) (Dataset)
|
| 188 |
+
nwb.icephys (object) (Dataset)
|
| 189 |
+
nwb.image (object) (Dataset)
|
| 190 |
+
nwb.misc (object) (Dataset)
|
| 191 |
+
nwb.ogen (object) (Dataset)
|
| 192 |
+
nwb.ophys (object) (Dataset)
|
| 193 |
+
nwb.retinotopy (object) (Dataset)
|
| 194 |
+
experiment-metadata/ (Group)
|
| 195 |
+
0.1.0/ (Group)
|
| 196 |
+
experiment_metadata.extensions (object) (Dataset)
|
| 197 |
+
namespace (object) (Dataset)
|
| 198 |
+
hdmf-common/ (Group)
|
| 199 |
+
1.8.0/ (Group)
|
| 200 |
+
base (object) (Dataset)
|
| 201 |
+
namespace (object) (Dataset)
|
| 202 |
+
sparse (object) (Dataset)
|
| 203 |
+
table (object) (Dataset)
|
| 204 |
+
hdmf-experimental/ (Group)
|
| 205 |
+
0.5.0/ (Group)
|
| 206 |
+
experimental (object) (Dataset)
|
| 207 |
+
namespace (object) (Dataset)
|
| 208 |
+
resources (object) (Dataset)
|
| 209 |
+
stimulus/ (Group)
|
| 210 |
+
presentation/ (Group)
|
| 211 |
+
chirp_stimulus/ (Group)
|
| 212 |
+
data (0, 0, 0) (uint8) (Dataset)
|
| 213 |
+
dimension (2,) (int64) (Dataset)
|
| 214 |
+
external_file (1,) (object) (Dataset)
|
| 215 |
+
format (object) (Dataset)
|
| 216 |
+
starting_time (float64) (Dataset)
|
| 217 |
+
movingbar_stimulus/ (Group)
|
| 218 |
+
data (0, 0, 0) (uint8) (Dataset)
|
| 219 |
+
dimension (2,) (int64) (Dataset)
|
| 220 |
+
external_file (1,) (object) (Dataset)
|
| 221 |
+
format (object) (Dataset)
|
| 222 |
+
starting_time (float64) (Dataset)
|
| 223 |
+
templates/ (Group)
|
| 224 |
+
timestamps_reference_time (object) (Dataset)
|
session_Experimenter_2_2023-02-20/experiment_2_LR/field_RGC7_structure.txt
ADDED
|
@@ -0,0 +1,224 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
NWB File Structure Report
|
| 2 |
+
========================
|
| 3 |
+
File: field_RGC7.nwb
|
| 4 |
+
Size: 24.12 MB
|
| 5 |
+
Generated: 2025-10-31 16:18:35
|
| 6 |
+
|
| 7 |
+
Structure:
|
| 8 |
+
----------
|
| 9 |
+
acquisition/ (Group)
|
| 10 |
+
TwoPhotonSeries_Cond_control_chirp_Pres_1/ (Group)
|
| 11 |
+
data (1485, 64, 64) (uint16) (Dataset)
|
| 12 |
+
imaging_plane/ (Group)
|
| 13 |
+
OpticalChannel/ (Group)
|
| 14 |
+
description (object) (Dataset)
|
| 15 |
+
emission_lambda (float64) (Dataset)
|
| 16 |
+
description (object) (Dataset)
|
| 17 |
+
device/ (Group)
|
| 18 |
+
excitation_lambda (float64) (Dataset)
|
| 19 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 20 |
+
imaging_rate (float64) (Dataset)
|
| 21 |
+
indicator (object) (Dataset)
|
| 22 |
+
location (object) (Dataset)
|
| 23 |
+
timestamps (1485,) (float64) (Dataset)
|
| 24 |
+
TwoPhotonSeries_Cond_control_movingbar_Pres_1/ (Group)
|
| 25 |
+
data (943, 64, 64) (uint16) (Dataset)
|
| 26 |
+
imaging_plane/ (Group)
|
| 27 |
+
OpticalChannel/ (Group)
|
| 28 |
+
description (object) (Dataset)
|
| 29 |
+
emission_lambda (float64) (Dataset)
|
| 30 |
+
description (object) (Dataset)
|
| 31 |
+
device/ (Group)
|
| 32 |
+
excitation_lambda (float64) (Dataset)
|
| 33 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 34 |
+
imaging_rate (float64) (Dataset)
|
| 35 |
+
indicator (object) (Dataset)
|
| 36 |
+
location (object) (Dataset)
|
| 37 |
+
timestamps (943,) (float64) (Dataset)
|
| 38 |
+
analysis/ (Group)
|
| 39 |
+
file_create_date (1,) (object) (Dataset)
|
| 40 |
+
general/ (Group)
|
| 41 |
+
devices/ (Group)
|
| 42 |
+
Microscope/ (Group)
|
| 43 |
+
experiment_metadata/ (Group)
|
| 44 |
+
experiment_number (object) (Dataset)
|
| 45 |
+
eye (object) (Dataset)
|
| 46 |
+
preparation_orientation (object) (Dataset)
|
| 47 |
+
setup_id (object) (Dataset)
|
| 48 |
+
experimenter (1,) (object) (Dataset)
|
| 49 |
+
institution (object) (Dataset)
|
| 50 |
+
lab (object) (Dataset)
|
| 51 |
+
optophysiology/ (Group)
|
| 52 |
+
ImagingPlane/ (Group)
|
| 53 |
+
OpticalChannel/ (Group)
|
| 54 |
+
description (object) (Dataset)
|
| 55 |
+
emission_lambda (float64) (Dataset)
|
| 56 |
+
description (object) (Dataset)
|
| 57 |
+
device/ (Group)
|
| 58 |
+
excitation_lambda (float64) (Dataset)
|
| 59 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 60 |
+
imaging_rate (float64) (Dataset)
|
| 61 |
+
indicator (object) (Dataset)
|
| 62 |
+
location (object) (Dataset)
|
| 63 |
+
related_publications (1,) (object) (Dataset)
|
| 64 |
+
subject/ (Group)
|
| 65 |
+
age (object) (Dataset)
|
| 66 |
+
date_of_birth (object) (Dataset)
|
| 67 |
+
genotype (object) (Dataset)
|
| 68 |
+
sex (object) (Dataset)
|
| 69 |
+
species (object) (Dataset)
|
| 70 |
+
identifier (object) (Dataset)
|
| 71 |
+
processing/ (Group)
|
| 72 |
+
Condition_control/ (Group)
|
| 73 |
+
cell_types/ (Group)
|
| 74 |
+
cluster_id (86,) (int64) (Dataset)
|
| 75 |
+
condition (86,) (object) (Dataset)
|
| 76 |
+
group_id (86,) (int64) (Dataset)
|
| 77 |
+
id (86,) (int64) (Dataset)
|
| 78 |
+
preproc_bar (86, 32) (float64) (Dataset)
|
| 79 |
+
preproc_chirp (86, 249) (float64) (Dataset)
|
| 80 |
+
prob_class (86,) (float64) (Dataset)
|
| 81 |
+
prob_cluster (86,) (float64) (Dataset)
|
| 82 |
+
prob_group (86,) (float64) (Dataset)
|
| 83 |
+
prob_supergroup (86,) (float64) (Dataset)
|
| 84 |
+
probs_per_cluster (86, 75) (float64) (Dataset)
|
| 85 |
+
roi_id (86,) (int64) (Dataset)
|
| 86 |
+
roi_table_link (86,) (int64) (Dataset)
|
| 87 |
+
supergroup (86,) (object) (Dataset)
|
| 88 |
+
chirp_60Hz_average/ (Group)
|
| 89 |
+
data (1982, 86) (float64) (Dataset)
|
| 90 |
+
timestamps (1982,) (float64) (Dataset)
|
| 91 |
+
chirp_8Hz_average/ (Group)
|
| 92 |
+
data (259, 86) (float64) (Dataset)
|
| 93 |
+
timestamps (259,) (float64) (Dataset)
|
| 94 |
+
chirp_features/ (Group)
|
| 95 |
+
chirp_on_off_index (86,) (float64) (Dataset)
|
| 96 |
+
chirp_pres_qidx (86,) (float64) (Dataset)
|
| 97 |
+
chirp_qidx (86,) (float64) (Dataset)
|
| 98 |
+
chirp_transience_index (86,) (float64) (Dataset)
|
| 99 |
+
id (86,) (int64) (Dataset)
|
| 100 |
+
roi_id (86,) (int64) (Dataset)
|
| 101 |
+
roi_table_link (86,) (int64) (Dataset)
|
| 102 |
+
chirp_preprocessed_traces/ (Group)
|
| 103 |
+
data (1485, 86) (float64) (Dataset)
|
| 104 |
+
timestamps (1485,) (float64) (Dataset)
|
| 105 |
+
chirp_snippets/ (Group)
|
| 106 |
+
data (259, 86, 5) (float64) (Dataset)
|
| 107 |
+
timestamps (259,) (float64) (Dataset)
|
| 108 |
+
chirp_snippets_t0/ (Group)
|
| 109 |
+
id (1,) (int64) (Dataset)
|
| 110 |
+
snippets_t0_array (1, 5, 86) (float64) (Dataset)
|
| 111 |
+
chirp_triggertimes_snippets/ (Group)
|
| 112 |
+
data (2, 86, 5) (float64) (Dataset)
|
| 113 |
+
starting_time (float64) (Dataset)
|
| 114 |
+
movingbar_features/ (Group)
|
| 115 |
+
bar_ds_index (86,) (float64) (Dataset)
|
| 116 |
+
bar_ds_pvalue (86,) (float64) (Dataset)
|
| 117 |
+
bar_os_index (86,) (float64) (Dataset)
|
| 118 |
+
bar_os_pvalue (86,) (float64) (Dataset)
|
| 119 |
+
bar_pref_dir (86,) (float64) (Dataset)
|
| 120 |
+
bar_pref_or (86,) (float64) (Dataset)
|
| 121 |
+
bar_pres_qidx (86,) (float64) (Dataset)
|
| 122 |
+
bar_qidx (86,) (float64) (Dataset)
|
| 123 |
+
id (86,) (int64) (Dataset)
|
| 124 |
+
roi_id (86,) (int64) (Dataset)
|
| 125 |
+
roi_table_link (86,) (int64) (Dataset)
|
| 126 |
+
movingbar_preprocessed_traces/ (Group)
|
| 127 |
+
data (943, 86) (float64) (Dataset)
|
| 128 |
+
timestamps (943,) (float64) (Dataset)
|
| 129 |
+
movingbar_snippets/ (Group)
|
| 130 |
+
data (33, 86, 24) (float32) (Dataset)
|
| 131 |
+
timestamps (33,) (float64) (Dataset)
|
| 132 |
+
movingbar_snippets_t0/ (Group)
|
| 133 |
+
id (1,) (int64) (Dataset)
|
| 134 |
+
snippets_t0_array (1, 24, 86) (float64) (Dataset)
|
| 135 |
+
movingbar_triggertimes_snippets/ (Group)
|
| 136 |
+
data (1, 86, 24) (float32) (Dataset)
|
| 137 |
+
starting_time (float64) (Dataset)
|
| 138 |
+
rois/ (Group)
|
| 139 |
+
ImageSegmentation/ (Group)
|
| 140 |
+
ROI masks/ (Group)
|
| 141 |
+
id (86,) (int64) (Dataset)
|
| 142 |
+
image_mask (86, 64, 64) (bool) (Dataset)
|
| 143 |
+
imaging_plane/ (Group)
|
| 144 |
+
OpticalChannel/ (Group)
|
| 145 |
+
description (object) (Dataset)
|
| 146 |
+
emission_lambda (float64) (Dataset)
|
| 147 |
+
description (object) (Dataset)
|
| 148 |
+
device/ (Group)
|
| 149 |
+
excitation_lambda (float64) (Dataset)
|
| 150 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 151 |
+
imaging_rate (float64) (Dataset)
|
| 152 |
+
indicator (object) (Dataset)
|
| 153 |
+
location (object) (Dataset)
|
| 154 |
+
nxpix (86,) (int64) (Dataset)
|
| 155 |
+
nypix (86,) (int64) (Dataset)
|
| 156 |
+
reference_images/ (Group)
|
| 157 |
+
roi_ids (86,) (int64) (Dataset)
|
| 158 |
+
roi_sizes (86,) (int64) (Dataset)
|
| 159 |
+
roi_sizes_um2 (86,) (float64) (Dataset)
|
| 160 |
+
session_info/ (Group)
|
| 161 |
+
presentation_sequence/ (Group)
|
| 162 |
+
absolute_start_time (2,) (object) (Dataset)
|
| 163 |
+
id (2,) (int64) (Dataset)
|
| 164 |
+
presentation_order (2,) (int64) (Dataset)
|
| 165 |
+
relative_start_time (2,) (float64) (Dataset)
|
| 166 |
+
stimulus_condition (2,) (object) (Dataset)
|
| 167 |
+
spatial/ (Group)
|
| 168 |
+
spatial_locations/ (Group)
|
| 169 |
+
field_temporal_nasal_pos_um (86,) (float64) (Dataset)
|
| 170 |
+
field_ventral_dorsal_pos_um (86,) (float64) (Dataset)
|
| 171 |
+
id (86,) (int64) (Dataset)
|
| 172 |
+
roi_id (86,) (int64) (Dataset)
|
| 173 |
+
roi_table_link (86,) (int64) (Dataset)
|
| 174 |
+
temporal_nasal_pos_um (86,) (float64) (Dataset)
|
| 175 |
+
ventral_dorsal_pos_um (86,) (float64) (Dataset)
|
| 176 |
+
session_description (object) (Dataset)
|
| 177 |
+
session_start_time (object) (Dataset)
|
| 178 |
+
specifications/ (Group)
|
| 179 |
+
core/ (Group)
|
| 180 |
+
2.8.0/ (Group)
|
| 181 |
+
namespace (object) (Dataset)
|
| 182 |
+
nwb.base (object) (Dataset)
|
| 183 |
+
nwb.behavior (object) (Dataset)
|
| 184 |
+
nwb.device (object) (Dataset)
|
| 185 |
+
nwb.ecephys (object) (Dataset)
|
| 186 |
+
nwb.epoch (object) (Dataset)
|
| 187 |
+
nwb.file (object) (Dataset)
|
| 188 |
+
nwb.icephys (object) (Dataset)
|
| 189 |
+
nwb.image (object) (Dataset)
|
| 190 |
+
nwb.misc (object) (Dataset)
|
| 191 |
+
nwb.ogen (object) (Dataset)
|
| 192 |
+
nwb.ophys (object) (Dataset)
|
| 193 |
+
nwb.retinotopy (object) (Dataset)
|
| 194 |
+
experiment-metadata/ (Group)
|
| 195 |
+
0.1.0/ (Group)
|
| 196 |
+
experiment_metadata.extensions (object) (Dataset)
|
| 197 |
+
namespace (object) (Dataset)
|
| 198 |
+
hdmf-common/ (Group)
|
| 199 |
+
1.8.0/ (Group)
|
| 200 |
+
base (object) (Dataset)
|
| 201 |
+
namespace (object) (Dataset)
|
| 202 |
+
sparse (object) (Dataset)
|
| 203 |
+
table (object) (Dataset)
|
| 204 |
+
hdmf-experimental/ (Group)
|
| 205 |
+
0.5.0/ (Group)
|
| 206 |
+
experimental (object) (Dataset)
|
| 207 |
+
namespace (object) (Dataset)
|
| 208 |
+
resources (object) (Dataset)
|
| 209 |
+
stimulus/ (Group)
|
| 210 |
+
presentation/ (Group)
|
| 211 |
+
chirp_stimulus/ (Group)
|
| 212 |
+
data (0, 0, 0) (uint8) (Dataset)
|
| 213 |
+
dimension (2,) (int64) (Dataset)
|
| 214 |
+
external_file (1,) (object) (Dataset)
|
| 215 |
+
format (object) (Dataset)
|
| 216 |
+
starting_time (float64) (Dataset)
|
| 217 |
+
movingbar_stimulus/ (Group)
|
| 218 |
+
data (0, 0, 0) (uint8) (Dataset)
|
| 219 |
+
dimension (2,) (int64) (Dataset)
|
| 220 |
+
external_file (1,) (object) (Dataset)
|
| 221 |
+
format (object) (Dataset)
|
| 222 |
+
starting_time (float64) (Dataset)
|
| 223 |
+
templates/ (Group)
|
| 224 |
+
timestamps_reference_time (object) (Dataset)
|
session_Experimenter_2_2023-02-20/experiment_2_LR/field_RGC8_structure.txt
ADDED
|
@@ -0,0 +1,224 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
NWB File Structure Report
|
| 2 |
+
========================
|
| 3 |
+
File: field_RGC8.nwb
|
| 4 |
+
Size: 24.26 MB
|
| 5 |
+
Generated: 2025-10-31 16:18:37
|
| 6 |
+
|
| 7 |
+
Structure:
|
| 8 |
+
----------
|
| 9 |
+
acquisition/ (Group)
|
| 10 |
+
TwoPhotonSeries_Cond_control_chirp_Pres_1/ (Group)
|
| 11 |
+
data (1562, 64, 64) (uint16) (Dataset)
|
| 12 |
+
imaging_plane/ (Group)
|
| 13 |
+
OpticalChannel/ (Group)
|
| 14 |
+
description (object) (Dataset)
|
| 15 |
+
emission_lambda (float64) (Dataset)
|
| 16 |
+
description (object) (Dataset)
|
| 17 |
+
device/ (Group)
|
| 18 |
+
excitation_lambda (float64) (Dataset)
|
| 19 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 20 |
+
imaging_rate (float64) (Dataset)
|
| 21 |
+
indicator (object) (Dataset)
|
| 22 |
+
location (object) (Dataset)
|
| 23 |
+
timestamps (1562,) (float64) (Dataset)
|
| 24 |
+
TwoPhotonSeries_Cond_control_movingbar_Pres_1/ (Group)
|
| 25 |
+
data (1067, 64, 64) (uint16) (Dataset)
|
| 26 |
+
imaging_plane/ (Group)
|
| 27 |
+
OpticalChannel/ (Group)
|
| 28 |
+
description (object) (Dataset)
|
| 29 |
+
emission_lambda (float64) (Dataset)
|
| 30 |
+
description (object) (Dataset)
|
| 31 |
+
device/ (Group)
|
| 32 |
+
excitation_lambda (float64) (Dataset)
|
| 33 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 34 |
+
imaging_rate (float64) (Dataset)
|
| 35 |
+
indicator (object) (Dataset)
|
| 36 |
+
location (object) (Dataset)
|
| 37 |
+
timestamps (1067,) (float64) (Dataset)
|
| 38 |
+
analysis/ (Group)
|
| 39 |
+
file_create_date (1,) (object) (Dataset)
|
| 40 |
+
general/ (Group)
|
| 41 |
+
devices/ (Group)
|
| 42 |
+
Microscope/ (Group)
|
| 43 |
+
experiment_metadata/ (Group)
|
| 44 |
+
experiment_number (object) (Dataset)
|
| 45 |
+
eye (object) (Dataset)
|
| 46 |
+
preparation_orientation (object) (Dataset)
|
| 47 |
+
setup_id (object) (Dataset)
|
| 48 |
+
experimenter (1,) (object) (Dataset)
|
| 49 |
+
institution (object) (Dataset)
|
| 50 |
+
lab (object) (Dataset)
|
| 51 |
+
optophysiology/ (Group)
|
| 52 |
+
ImagingPlane/ (Group)
|
| 53 |
+
OpticalChannel/ (Group)
|
| 54 |
+
description (object) (Dataset)
|
| 55 |
+
emission_lambda (float64) (Dataset)
|
| 56 |
+
description (object) (Dataset)
|
| 57 |
+
device/ (Group)
|
| 58 |
+
excitation_lambda (float64) (Dataset)
|
| 59 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 60 |
+
imaging_rate (float64) (Dataset)
|
| 61 |
+
indicator (object) (Dataset)
|
| 62 |
+
location (object) (Dataset)
|
| 63 |
+
related_publications (1,) (object) (Dataset)
|
| 64 |
+
subject/ (Group)
|
| 65 |
+
age (object) (Dataset)
|
| 66 |
+
date_of_birth (object) (Dataset)
|
| 67 |
+
genotype (object) (Dataset)
|
| 68 |
+
sex (object) (Dataset)
|
| 69 |
+
species (object) (Dataset)
|
| 70 |
+
identifier (object) (Dataset)
|
| 71 |
+
processing/ (Group)
|
| 72 |
+
Condition_control/ (Group)
|
| 73 |
+
cell_types/ (Group)
|
| 74 |
+
cluster_id (59,) (int64) (Dataset)
|
| 75 |
+
condition (59,) (object) (Dataset)
|
| 76 |
+
group_id (59,) (int64) (Dataset)
|
| 77 |
+
id (59,) (int64) (Dataset)
|
| 78 |
+
preproc_bar (59, 32) (float64) (Dataset)
|
| 79 |
+
preproc_chirp (59, 249) (float64) (Dataset)
|
| 80 |
+
prob_class (59,) (float64) (Dataset)
|
| 81 |
+
prob_cluster (59,) (float64) (Dataset)
|
| 82 |
+
prob_group (59,) (float64) (Dataset)
|
| 83 |
+
prob_supergroup (59,) (float64) (Dataset)
|
| 84 |
+
probs_per_cluster (59, 75) (float64) (Dataset)
|
| 85 |
+
roi_id (59,) (int64) (Dataset)
|
| 86 |
+
roi_table_link (59,) (int64) (Dataset)
|
| 87 |
+
supergroup (59,) (object) (Dataset)
|
| 88 |
+
chirp_60Hz_average/ (Group)
|
| 89 |
+
data (1982, 59) (float64) (Dataset)
|
| 90 |
+
timestamps (1982,) (float64) (Dataset)
|
| 91 |
+
chirp_8Hz_average/ (Group)
|
| 92 |
+
data (259, 59) (float64) (Dataset)
|
| 93 |
+
timestamps (259,) (float64) (Dataset)
|
| 94 |
+
chirp_features/ (Group)
|
| 95 |
+
chirp_on_off_index (59,) (float64) (Dataset)
|
| 96 |
+
chirp_pres_qidx (59,) (float64) (Dataset)
|
| 97 |
+
chirp_qidx (59,) (float64) (Dataset)
|
| 98 |
+
chirp_transience_index (59,) (float64) (Dataset)
|
| 99 |
+
id (59,) (int64) (Dataset)
|
| 100 |
+
roi_id (59,) (int64) (Dataset)
|
| 101 |
+
roi_table_link (59,) (int64) (Dataset)
|
| 102 |
+
chirp_preprocessed_traces/ (Group)
|
| 103 |
+
data (1562, 59) (float64) (Dataset)
|
| 104 |
+
timestamps (1562,) (float64) (Dataset)
|
| 105 |
+
chirp_snippets/ (Group)
|
| 106 |
+
data (259, 59, 5) (float64) (Dataset)
|
| 107 |
+
timestamps (259,) (float64) (Dataset)
|
| 108 |
+
chirp_snippets_t0/ (Group)
|
| 109 |
+
id (1,) (int64) (Dataset)
|
| 110 |
+
snippets_t0_array (1, 5, 59) (float64) (Dataset)
|
| 111 |
+
chirp_triggertimes_snippets/ (Group)
|
| 112 |
+
data (2, 59, 5) (float64) (Dataset)
|
| 113 |
+
starting_time (float64) (Dataset)
|
| 114 |
+
movingbar_features/ (Group)
|
| 115 |
+
bar_ds_index (59,) (float64) (Dataset)
|
| 116 |
+
bar_ds_pvalue (59,) (float64) (Dataset)
|
| 117 |
+
bar_os_index (59,) (float64) (Dataset)
|
| 118 |
+
bar_os_pvalue (59,) (float64) (Dataset)
|
| 119 |
+
bar_pref_dir (59,) (float64) (Dataset)
|
| 120 |
+
bar_pref_or (59,) (float64) (Dataset)
|
| 121 |
+
bar_pres_qidx (59,) (float64) (Dataset)
|
| 122 |
+
bar_qidx (59,) (float64) (Dataset)
|
| 123 |
+
id (59,) (int64) (Dataset)
|
| 124 |
+
roi_id (59,) (int64) (Dataset)
|
| 125 |
+
roi_table_link (59,) (int64) (Dataset)
|
| 126 |
+
movingbar_preprocessed_traces/ (Group)
|
| 127 |
+
data (1067, 59) (float64) (Dataset)
|
| 128 |
+
timestamps (1067,) (float64) (Dataset)
|
| 129 |
+
movingbar_snippets/ (Group)
|
| 130 |
+
data (33, 59, 24) (float32) (Dataset)
|
| 131 |
+
timestamps (33,) (float64) (Dataset)
|
| 132 |
+
movingbar_snippets_t0/ (Group)
|
| 133 |
+
id (1,) (int64) (Dataset)
|
| 134 |
+
snippets_t0_array (1, 24, 59) (float64) (Dataset)
|
| 135 |
+
movingbar_triggertimes_snippets/ (Group)
|
| 136 |
+
data (1, 59, 24) (float32) (Dataset)
|
| 137 |
+
starting_time (float64) (Dataset)
|
| 138 |
+
rois/ (Group)
|
| 139 |
+
ImageSegmentation/ (Group)
|
| 140 |
+
ROI masks/ (Group)
|
| 141 |
+
id (59,) (int64) (Dataset)
|
| 142 |
+
image_mask (59, 64, 64) (bool) (Dataset)
|
| 143 |
+
imaging_plane/ (Group)
|
| 144 |
+
OpticalChannel/ (Group)
|
| 145 |
+
description (object) (Dataset)
|
| 146 |
+
emission_lambda (float64) (Dataset)
|
| 147 |
+
description (object) (Dataset)
|
| 148 |
+
device/ (Group)
|
| 149 |
+
excitation_lambda (float64) (Dataset)
|
| 150 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 151 |
+
imaging_rate (float64) (Dataset)
|
| 152 |
+
indicator (object) (Dataset)
|
| 153 |
+
location (object) (Dataset)
|
| 154 |
+
nxpix (59,) (int64) (Dataset)
|
| 155 |
+
nypix (59,) (int64) (Dataset)
|
| 156 |
+
reference_images/ (Group)
|
| 157 |
+
roi_ids (59,) (int64) (Dataset)
|
| 158 |
+
roi_sizes (59,) (int64) (Dataset)
|
| 159 |
+
roi_sizes_um2 (59,) (float64) (Dataset)
|
| 160 |
+
session_info/ (Group)
|
| 161 |
+
presentation_sequence/ (Group)
|
| 162 |
+
absolute_start_time (2,) (object) (Dataset)
|
| 163 |
+
id (2,) (int64) (Dataset)
|
| 164 |
+
presentation_order (2,) (int64) (Dataset)
|
| 165 |
+
relative_start_time (2,) (float64) (Dataset)
|
| 166 |
+
stimulus_condition (2,) (object) (Dataset)
|
| 167 |
+
spatial/ (Group)
|
| 168 |
+
spatial_locations/ (Group)
|
| 169 |
+
field_temporal_nasal_pos_um (59,) (float64) (Dataset)
|
| 170 |
+
field_ventral_dorsal_pos_um (59,) (float64) (Dataset)
|
| 171 |
+
id (59,) (int64) (Dataset)
|
| 172 |
+
roi_id (59,) (int64) (Dataset)
|
| 173 |
+
roi_table_link (59,) (int64) (Dataset)
|
| 174 |
+
temporal_nasal_pos_um (59,) (float64) (Dataset)
|
| 175 |
+
ventral_dorsal_pos_um (59,) (float64) (Dataset)
|
| 176 |
+
session_description (object) (Dataset)
|
| 177 |
+
session_start_time (object) (Dataset)
|
| 178 |
+
specifications/ (Group)
|
| 179 |
+
core/ (Group)
|
| 180 |
+
2.8.0/ (Group)
|
| 181 |
+
namespace (object) (Dataset)
|
| 182 |
+
nwb.base (object) (Dataset)
|
| 183 |
+
nwb.behavior (object) (Dataset)
|
| 184 |
+
nwb.device (object) (Dataset)
|
| 185 |
+
nwb.ecephys (object) (Dataset)
|
| 186 |
+
nwb.epoch (object) (Dataset)
|
| 187 |
+
nwb.file (object) (Dataset)
|
| 188 |
+
nwb.icephys (object) (Dataset)
|
| 189 |
+
nwb.image (object) (Dataset)
|
| 190 |
+
nwb.misc (object) (Dataset)
|
| 191 |
+
nwb.ogen (object) (Dataset)
|
| 192 |
+
nwb.ophys (object) (Dataset)
|
| 193 |
+
nwb.retinotopy (object) (Dataset)
|
| 194 |
+
experiment-metadata/ (Group)
|
| 195 |
+
0.1.0/ (Group)
|
| 196 |
+
experiment_metadata.extensions (object) (Dataset)
|
| 197 |
+
namespace (object) (Dataset)
|
| 198 |
+
hdmf-common/ (Group)
|
| 199 |
+
1.8.0/ (Group)
|
| 200 |
+
base (object) (Dataset)
|
| 201 |
+
namespace (object) (Dataset)
|
| 202 |
+
sparse (object) (Dataset)
|
| 203 |
+
table (object) (Dataset)
|
| 204 |
+
hdmf-experimental/ (Group)
|
| 205 |
+
0.5.0/ (Group)
|
| 206 |
+
experimental (object) (Dataset)
|
| 207 |
+
namespace (object) (Dataset)
|
| 208 |
+
resources (object) (Dataset)
|
| 209 |
+
stimulus/ (Group)
|
| 210 |
+
presentation/ (Group)
|
| 211 |
+
chirp_stimulus/ (Group)
|
| 212 |
+
data (0, 0, 0) (uint8) (Dataset)
|
| 213 |
+
dimension (2,) (int64) (Dataset)
|
| 214 |
+
external_file (1,) (object) (Dataset)
|
| 215 |
+
format (object) (Dataset)
|
| 216 |
+
starting_time (float64) (Dataset)
|
| 217 |
+
movingbar_stimulus/ (Group)
|
| 218 |
+
data (0, 0, 0) (uint8) (Dataset)
|
| 219 |
+
dimension (2,) (int64) (Dataset)
|
| 220 |
+
external_file (1,) (object) (Dataset)
|
| 221 |
+
format (object) (Dataset)
|
| 222 |
+
starting_time (float64) (Dataset)
|
| 223 |
+
templates/ (Group)
|
| 224 |
+
timestamps_reference_time (object) (Dataset)
|
session_Experimenter_2_2023-09-05/experiment_1_LR/field_RGC0_structure.txt
ADDED
|
@@ -0,0 +1,224 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
NWB File Structure Report
|
| 2 |
+
========================
|
| 3 |
+
File: field_RGC0.nwb
|
| 4 |
+
Size: 29.91 MB
|
| 5 |
+
Generated: 2025-10-31 16:20:31
|
| 6 |
+
|
| 7 |
+
Structure:
|
| 8 |
+
----------
|
| 9 |
+
acquisition/ (Group)
|
| 10 |
+
TwoPhotonSeries_Cond_control_chirp_Pres_1/ (Group)
|
| 11 |
+
data (1518, 64, 64) (uint16) (Dataset)
|
| 12 |
+
imaging_plane/ (Group)
|
| 13 |
+
OpticalChannel/ (Group)
|
| 14 |
+
description (object) (Dataset)
|
| 15 |
+
emission_lambda (float64) (Dataset)
|
| 16 |
+
description (object) (Dataset)
|
| 17 |
+
device/ (Group)
|
| 18 |
+
excitation_lambda (float64) (Dataset)
|
| 19 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 20 |
+
imaging_rate (float64) (Dataset)
|
| 21 |
+
indicator (object) (Dataset)
|
| 22 |
+
location (object) (Dataset)
|
| 23 |
+
timestamps (1518,) (float64) (Dataset)
|
| 24 |
+
TwoPhotonSeries_Cond_control_movingbar_Pres_1/ (Group)
|
| 25 |
+
data (1571, 64, 64) (uint16) (Dataset)
|
| 26 |
+
imaging_plane/ (Group)
|
| 27 |
+
OpticalChannel/ (Group)
|
| 28 |
+
description (object) (Dataset)
|
| 29 |
+
emission_lambda (float64) (Dataset)
|
| 30 |
+
description (object) (Dataset)
|
| 31 |
+
device/ (Group)
|
| 32 |
+
excitation_lambda (float64) (Dataset)
|
| 33 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 34 |
+
imaging_rate (float64) (Dataset)
|
| 35 |
+
indicator (object) (Dataset)
|
| 36 |
+
location (object) (Dataset)
|
| 37 |
+
timestamps (1571,) (float64) (Dataset)
|
| 38 |
+
analysis/ (Group)
|
| 39 |
+
file_create_date (1,) (object) (Dataset)
|
| 40 |
+
general/ (Group)
|
| 41 |
+
devices/ (Group)
|
| 42 |
+
Microscope/ (Group)
|
| 43 |
+
experiment_metadata/ (Group)
|
| 44 |
+
experiment_number (object) (Dataset)
|
| 45 |
+
eye (object) (Dataset)
|
| 46 |
+
preparation_orientation (object) (Dataset)
|
| 47 |
+
setup_id (object) (Dataset)
|
| 48 |
+
experimenter (1,) (object) (Dataset)
|
| 49 |
+
institution (object) (Dataset)
|
| 50 |
+
lab (object) (Dataset)
|
| 51 |
+
optophysiology/ (Group)
|
| 52 |
+
ImagingPlane/ (Group)
|
| 53 |
+
OpticalChannel/ (Group)
|
| 54 |
+
description (object) (Dataset)
|
| 55 |
+
emission_lambda (float64) (Dataset)
|
| 56 |
+
description (object) (Dataset)
|
| 57 |
+
device/ (Group)
|
| 58 |
+
excitation_lambda (float64) (Dataset)
|
| 59 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 60 |
+
imaging_rate (float64) (Dataset)
|
| 61 |
+
indicator (object) (Dataset)
|
| 62 |
+
location (object) (Dataset)
|
| 63 |
+
related_publications (1,) (object) (Dataset)
|
| 64 |
+
subject/ (Group)
|
| 65 |
+
age (object) (Dataset)
|
| 66 |
+
date_of_birth (object) (Dataset)
|
| 67 |
+
genotype (object) (Dataset)
|
| 68 |
+
sex (object) (Dataset)
|
| 69 |
+
species (object) (Dataset)
|
| 70 |
+
identifier (object) (Dataset)
|
| 71 |
+
processing/ (Group)
|
| 72 |
+
Condition_control/ (Group)
|
| 73 |
+
cell_types/ (Group)
|
| 74 |
+
cluster_id (89,) (int64) (Dataset)
|
| 75 |
+
condition (89,) (object) (Dataset)
|
| 76 |
+
group_id (89,) (int64) (Dataset)
|
| 77 |
+
id (89,) (int64) (Dataset)
|
| 78 |
+
preproc_bar (89, 32) (float64) (Dataset)
|
| 79 |
+
preproc_chirp (89, 249) (float64) (Dataset)
|
| 80 |
+
prob_class (89,) (float64) (Dataset)
|
| 81 |
+
prob_cluster (89,) (float64) (Dataset)
|
| 82 |
+
prob_group (89,) (float64) (Dataset)
|
| 83 |
+
prob_supergroup (89,) (float64) (Dataset)
|
| 84 |
+
probs_per_cluster (89, 75) (float64) (Dataset)
|
| 85 |
+
roi_id (89,) (int64) (Dataset)
|
| 86 |
+
roi_table_link (89,) (int64) (Dataset)
|
| 87 |
+
supergroup (89,) (object) (Dataset)
|
| 88 |
+
chirp_60Hz_average/ (Group)
|
| 89 |
+
data (1982, 89) (float64) (Dataset)
|
| 90 |
+
timestamps (1982,) (float64) (Dataset)
|
| 91 |
+
chirp_8Hz_average/ (Group)
|
| 92 |
+
data (259, 89) (float64) (Dataset)
|
| 93 |
+
timestamps (259,) (float64) (Dataset)
|
| 94 |
+
chirp_features/ (Group)
|
| 95 |
+
chirp_on_off_index (89,) (float64) (Dataset)
|
| 96 |
+
chirp_pres_qidx (89,) (float64) (Dataset)
|
| 97 |
+
chirp_qidx (89,) (float64) (Dataset)
|
| 98 |
+
chirp_transience_index (89,) (float64) (Dataset)
|
| 99 |
+
id (89,) (int64) (Dataset)
|
| 100 |
+
roi_id (89,) (int64) (Dataset)
|
| 101 |
+
roi_table_link (89,) (int64) (Dataset)
|
| 102 |
+
chirp_preprocessed_traces/ (Group)
|
| 103 |
+
data (1518, 89) (float64) (Dataset)
|
| 104 |
+
timestamps (1518,) (float64) (Dataset)
|
| 105 |
+
chirp_snippets/ (Group)
|
| 106 |
+
data (259, 89, 5) (float64) (Dataset)
|
| 107 |
+
timestamps (259,) (float64) (Dataset)
|
| 108 |
+
chirp_snippets_t0/ (Group)
|
| 109 |
+
id (1,) (int64) (Dataset)
|
| 110 |
+
snippets_t0_array (1, 5, 89) (float64) (Dataset)
|
| 111 |
+
chirp_triggertimes_snippets/ (Group)
|
| 112 |
+
data (2, 89, 5) (float64) (Dataset)
|
| 113 |
+
starting_time (float64) (Dataset)
|
| 114 |
+
movingbar_features/ (Group)
|
| 115 |
+
bar_ds_index (89,) (float64) (Dataset)
|
| 116 |
+
bar_ds_pvalue (89,) (float64) (Dataset)
|
| 117 |
+
bar_os_index (89,) (float64) (Dataset)
|
| 118 |
+
bar_os_pvalue (89,) (float64) (Dataset)
|
| 119 |
+
bar_pref_dir (89,) (float64) (Dataset)
|
| 120 |
+
bar_pref_or (89,) (float64) (Dataset)
|
| 121 |
+
bar_pres_qidx (89,) (float64) (Dataset)
|
| 122 |
+
bar_qidx (89,) (float64) (Dataset)
|
| 123 |
+
id (89,) (int64) (Dataset)
|
| 124 |
+
roi_id (89,) (int64) (Dataset)
|
| 125 |
+
roi_table_link (89,) (int64) (Dataset)
|
| 126 |
+
movingbar_preprocessed_traces/ (Group)
|
| 127 |
+
data (1571, 89) (float64) (Dataset)
|
| 128 |
+
timestamps (1571,) (float64) (Dataset)
|
| 129 |
+
movingbar_snippets/ (Group)
|
| 130 |
+
data (33, 89, 24) (float32) (Dataset)
|
| 131 |
+
timestamps (33,) (float64) (Dataset)
|
| 132 |
+
movingbar_snippets_t0/ (Group)
|
| 133 |
+
id (1,) (int64) (Dataset)
|
| 134 |
+
snippets_t0_array (1, 24, 89) (float64) (Dataset)
|
| 135 |
+
movingbar_triggertimes_snippets/ (Group)
|
| 136 |
+
data (1, 89, 24) (float32) (Dataset)
|
| 137 |
+
starting_time (float64) (Dataset)
|
| 138 |
+
rois/ (Group)
|
| 139 |
+
ImageSegmentation/ (Group)
|
| 140 |
+
ROI masks/ (Group)
|
| 141 |
+
id (89,) (int64) (Dataset)
|
| 142 |
+
image_mask (89, 64, 64) (bool) (Dataset)
|
| 143 |
+
imaging_plane/ (Group)
|
| 144 |
+
OpticalChannel/ (Group)
|
| 145 |
+
description (object) (Dataset)
|
| 146 |
+
emission_lambda (float64) (Dataset)
|
| 147 |
+
description (object) (Dataset)
|
| 148 |
+
device/ (Group)
|
| 149 |
+
excitation_lambda (float64) (Dataset)
|
| 150 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 151 |
+
imaging_rate (float64) (Dataset)
|
| 152 |
+
indicator (object) (Dataset)
|
| 153 |
+
location (object) (Dataset)
|
| 154 |
+
nxpix (89,) (int64) (Dataset)
|
| 155 |
+
nypix (89,) (int64) (Dataset)
|
| 156 |
+
reference_images/ (Group)
|
| 157 |
+
roi_ids (89,) (int64) (Dataset)
|
| 158 |
+
roi_sizes (89,) (int64) (Dataset)
|
| 159 |
+
roi_sizes_um2 (89,) (float64) (Dataset)
|
| 160 |
+
session_info/ (Group)
|
| 161 |
+
presentation_sequence/ (Group)
|
| 162 |
+
absolute_start_time (2,) (object) (Dataset)
|
| 163 |
+
id (2,) (int64) (Dataset)
|
| 164 |
+
presentation_order (2,) (int64) (Dataset)
|
| 165 |
+
relative_start_time (2,) (float64) (Dataset)
|
| 166 |
+
stimulus_condition (2,) (object) (Dataset)
|
| 167 |
+
spatial/ (Group)
|
| 168 |
+
spatial_locations/ (Group)
|
| 169 |
+
field_temporal_nasal_pos_um (89,) (float64) (Dataset)
|
| 170 |
+
field_ventral_dorsal_pos_um (89,) (float64) (Dataset)
|
| 171 |
+
id (89,) (int64) (Dataset)
|
| 172 |
+
roi_id (89,) (int64) (Dataset)
|
| 173 |
+
roi_table_link (89,) (int64) (Dataset)
|
| 174 |
+
temporal_nasal_pos_um (89,) (float64) (Dataset)
|
| 175 |
+
ventral_dorsal_pos_um (89,) (float64) (Dataset)
|
| 176 |
+
session_description (object) (Dataset)
|
| 177 |
+
session_start_time (object) (Dataset)
|
| 178 |
+
specifications/ (Group)
|
| 179 |
+
core/ (Group)
|
| 180 |
+
2.8.0/ (Group)
|
| 181 |
+
namespace (object) (Dataset)
|
| 182 |
+
nwb.base (object) (Dataset)
|
| 183 |
+
nwb.behavior (object) (Dataset)
|
| 184 |
+
nwb.device (object) (Dataset)
|
| 185 |
+
nwb.ecephys (object) (Dataset)
|
| 186 |
+
nwb.epoch (object) (Dataset)
|
| 187 |
+
nwb.file (object) (Dataset)
|
| 188 |
+
nwb.icephys (object) (Dataset)
|
| 189 |
+
nwb.image (object) (Dataset)
|
| 190 |
+
nwb.misc (object) (Dataset)
|
| 191 |
+
nwb.ogen (object) (Dataset)
|
| 192 |
+
nwb.ophys (object) (Dataset)
|
| 193 |
+
nwb.retinotopy (object) (Dataset)
|
| 194 |
+
experiment-metadata/ (Group)
|
| 195 |
+
0.1.0/ (Group)
|
| 196 |
+
experiment_metadata.extensions (object) (Dataset)
|
| 197 |
+
namespace (object) (Dataset)
|
| 198 |
+
hdmf-common/ (Group)
|
| 199 |
+
1.8.0/ (Group)
|
| 200 |
+
base (object) (Dataset)
|
| 201 |
+
namespace (object) (Dataset)
|
| 202 |
+
sparse (object) (Dataset)
|
| 203 |
+
table (object) (Dataset)
|
| 204 |
+
hdmf-experimental/ (Group)
|
| 205 |
+
0.5.0/ (Group)
|
| 206 |
+
experimental (object) (Dataset)
|
| 207 |
+
namespace (object) (Dataset)
|
| 208 |
+
resources (object) (Dataset)
|
| 209 |
+
stimulus/ (Group)
|
| 210 |
+
presentation/ (Group)
|
| 211 |
+
chirp_stimulus/ (Group)
|
| 212 |
+
data (0, 0, 0) (uint8) (Dataset)
|
| 213 |
+
dimension (2,) (int64) (Dataset)
|
| 214 |
+
external_file (1,) (object) (Dataset)
|
| 215 |
+
format (object) (Dataset)
|
| 216 |
+
starting_time (float64) (Dataset)
|
| 217 |
+
movingbar_stimulus/ (Group)
|
| 218 |
+
data (0, 0, 0) (uint8) (Dataset)
|
| 219 |
+
dimension (2,) (int64) (Dataset)
|
| 220 |
+
external_file (1,) (object) (Dataset)
|
| 221 |
+
format (object) (Dataset)
|
| 222 |
+
starting_time (float64) (Dataset)
|
| 223 |
+
templates/ (Group)
|
| 224 |
+
timestamps_reference_time (object) (Dataset)
|
session_Experimenter_2_2023-09-05/experiment_1_LR/field_RGC1_structure.txt
ADDED
|
@@ -0,0 +1,224 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
NWB File Structure Report
|
| 2 |
+
========================
|
| 3 |
+
File: field_RGC1.nwb
|
| 4 |
+
Size: 24.65 MB
|
| 5 |
+
Generated: 2025-10-31 16:20:33
|
| 6 |
+
|
| 7 |
+
Structure:
|
| 8 |
+
----------
|
| 9 |
+
acquisition/ (Group)
|
| 10 |
+
TwoPhotonSeries_Cond_control_chirp_Pres_1/ (Group)
|
| 11 |
+
data (1571, 64, 64) (uint16) (Dataset)
|
| 12 |
+
imaging_plane/ (Group)
|
| 13 |
+
OpticalChannel/ (Group)
|
| 14 |
+
description (object) (Dataset)
|
| 15 |
+
emission_lambda (float64) (Dataset)
|
| 16 |
+
description (object) (Dataset)
|
| 17 |
+
device/ (Group)
|
| 18 |
+
excitation_lambda (float64) (Dataset)
|
| 19 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 20 |
+
imaging_rate (float64) (Dataset)
|
| 21 |
+
indicator (object) (Dataset)
|
| 22 |
+
location (object) (Dataset)
|
| 23 |
+
timestamps (1571,) (float64) (Dataset)
|
| 24 |
+
TwoPhotonSeries_Cond_control_movingbar_Pres_1/ (Group)
|
| 25 |
+
data (967, 64, 64) (uint16) (Dataset)
|
| 26 |
+
imaging_plane/ (Group)
|
| 27 |
+
OpticalChannel/ (Group)
|
| 28 |
+
description (object) (Dataset)
|
| 29 |
+
emission_lambda (float64) (Dataset)
|
| 30 |
+
description (object) (Dataset)
|
| 31 |
+
device/ (Group)
|
| 32 |
+
excitation_lambda (float64) (Dataset)
|
| 33 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 34 |
+
imaging_rate (float64) (Dataset)
|
| 35 |
+
indicator (object) (Dataset)
|
| 36 |
+
location (object) (Dataset)
|
| 37 |
+
timestamps (967,) (float64) (Dataset)
|
| 38 |
+
analysis/ (Group)
|
| 39 |
+
file_create_date (1,) (object) (Dataset)
|
| 40 |
+
general/ (Group)
|
| 41 |
+
devices/ (Group)
|
| 42 |
+
Microscope/ (Group)
|
| 43 |
+
experiment_metadata/ (Group)
|
| 44 |
+
experiment_number (object) (Dataset)
|
| 45 |
+
eye (object) (Dataset)
|
| 46 |
+
preparation_orientation (object) (Dataset)
|
| 47 |
+
setup_id (object) (Dataset)
|
| 48 |
+
experimenter (1,) (object) (Dataset)
|
| 49 |
+
institution (object) (Dataset)
|
| 50 |
+
lab (object) (Dataset)
|
| 51 |
+
optophysiology/ (Group)
|
| 52 |
+
ImagingPlane/ (Group)
|
| 53 |
+
OpticalChannel/ (Group)
|
| 54 |
+
description (object) (Dataset)
|
| 55 |
+
emission_lambda (float64) (Dataset)
|
| 56 |
+
description (object) (Dataset)
|
| 57 |
+
device/ (Group)
|
| 58 |
+
excitation_lambda (float64) (Dataset)
|
| 59 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 60 |
+
imaging_rate (float64) (Dataset)
|
| 61 |
+
indicator (object) (Dataset)
|
| 62 |
+
location (object) (Dataset)
|
| 63 |
+
related_publications (1,) (object) (Dataset)
|
| 64 |
+
subject/ (Group)
|
| 65 |
+
age (object) (Dataset)
|
| 66 |
+
date_of_birth (object) (Dataset)
|
| 67 |
+
genotype (object) (Dataset)
|
| 68 |
+
sex (object) (Dataset)
|
| 69 |
+
species (object) (Dataset)
|
| 70 |
+
identifier (object) (Dataset)
|
| 71 |
+
processing/ (Group)
|
| 72 |
+
Condition_control/ (Group)
|
| 73 |
+
cell_types/ (Group)
|
| 74 |
+
cluster_id (79,) (int64) (Dataset)
|
| 75 |
+
condition (79,) (object) (Dataset)
|
| 76 |
+
group_id (79,) (int64) (Dataset)
|
| 77 |
+
id (79,) (int64) (Dataset)
|
| 78 |
+
preproc_bar (79, 32) (float64) (Dataset)
|
| 79 |
+
preproc_chirp (79, 249) (float64) (Dataset)
|
| 80 |
+
prob_class (79,) (float64) (Dataset)
|
| 81 |
+
prob_cluster (79,) (float64) (Dataset)
|
| 82 |
+
prob_group (79,) (float64) (Dataset)
|
| 83 |
+
prob_supergroup (79,) (float64) (Dataset)
|
| 84 |
+
probs_per_cluster (79, 75) (float64) (Dataset)
|
| 85 |
+
roi_id (79,) (int64) (Dataset)
|
| 86 |
+
roi_table_link (79,) (int64) (Dataset)
|
| 87 |
+
supergroup (79,) (object) (Dataset)
|
| 88 |
+
chirp_60Hz_average/ (Group)
|
| 89 |
+
data (1982, 79) (float64) (Dataset)
|
| 90 |
+
timestamps (1982,) (float64) (Dataset)
|
| 91 |
+
chirp_8Hz_average/ (Group)
|
| 92 |
+
data (259, 79) (float64) (Dataset)
|
| 93 |
+
timestamps (259,) (float64) (Dataset)
|
| 94 |
+
chirp_features/ (Group)
|
| 95 |
+
chirp_on_off_index (79,) (float64) (Dataset)
|
| 96 |
+
chirp_pres_qidx (79,) (float64) (Dataset)
|
| 97 |
+
chirp_qidx (79,) (float64) (Dataset)
|
| 98 |
+
chirp_transience_index (79,) (float64) (Dataset)
|
| 99 |
+
id (79,) (int64) (Dataset)
|
| 100 |
+
roi_id (79,) (int64) (Dataset)
|
| 101 |
+
roi_table_link (79,) (int64) (Dataset)
|
| 102 |
+
chirp_preprocessed_traces/ (Group)
|
| 103 |
+
data (1571, 79) (float64) (Dataset)
|
| 104 |
+
timestamps (1571,) (float64) (Dataset)
|
| 105 |
+
chirp_snippets/ (Group)
|
| 106 |
+
data (259, 79, 5) (float64) (Dataset)
|
| 107 |
+
timestamps (259,) (float64) (Dataset)
|
| 108 |
+
chirp_snippets_t0/ (Group)
|
| 109 |
+
id (1,) (int64) (Dataset)
|
| 110 |
+
snippets_t0_array (1, 5, 79) (float64) (Dataset)
|
| 111 |
+
chirp_triggertimes_snippets/ (Group)
|
| 112 |
+
data (2, 79, 5) (float64) (Dataset)
|
| 113 |
+
starting_time (float64) (Dataset)
|
| 114 |
+
movingbar_features/ (Group)
|
| 115 |
+
bar_ds_index (79,) (float64) (Dataset)
|
| 116 |
+
bar_ds_pvalue (79,) (float64) (Dataset)
|
| 117 |
+
bar_os_index (79,) (float64) (Dataset)
|
| 118 |
+
bar_os_pvalue (79,) (float64) (Dataset)
|
| 119 |
+
bar_pref_dir (79,) (float64) (Dataset)
|
| 120 |
+
bar_pref_or (79,) (float64) (Dataset)
|
| 121 |
+
bar_pres_qidx (79,) (float64) (Dataset)
|
| 122 |
+
bar_qidx (79,) (float64) (Dataset)
|
| 123 |
+
id (79,) (int64) (Dataset)
|
| 124 |
+
roi_id (79,) (int64) (Dataset)
|
| 125 |
+
roi_table_link (79,) (int64) (Dataset)
|
| 126 |
+
movingbar_preprocessed_traces/ (Group)
|
| 127 |
+
data (967, 79) (float64) (Dataset)
|
| 128 |
+
timestamps (967,) (float64) (Dataset)
|
| 129 |
+
movingbar_snippets/ (Group)
|
| 130 |
+
data (33, 79, 24) (float32) (Dataset)
|
| 131 |
+
timestamps (33,) (float64) (Dataset)
|
| 132 |
+
movingbar_snippets_t0/ (Group)
|
| 133 |
+
id (1,) (int64) (Dataset)
|
| 134 |
+
snippets_t0_array (1, 24, 79) (float64) (Dataset)
|
| 135 |
+
movingbar_triggertimes_snippets/ (Group)
|
| 136 |
+
data (1, 79, 24) (float32) (Dataset)
|
| 137 |
+
starting_time (float64) (Dataset)
|
| 138 |
+
rois/ (Group)
|
| 139 |
+
ImageSegmentation/ (Group)
|
| 140 |
+
ROI masks/ (Group)
|
| 141 |
+
id (79,) (int64) (Dataset)
|
| 142 |
+
image_mask (79, 64, 64) (bool) (Dataset)
|
| 143 |
+
imaging_plane/ (Group)
|
| 144 |
+
OpticalChannel/ (Group)
|
| 145 |
+
description (object) (Dataset)
|
| 146 |
+
emission_lambda (float64) (Dataset)
|
| 147 |
+
description (object) (Dataset)
|
| 148 |
+
device/ (Group)
|
| 149 |
+
excitation_lambda (float64) (Dataset)
|
| 150 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 151 |
+
imaging_rate (float64) (Dataset)
|
| 152 |
+
indicator (object) (Dataset)
|
| 153 |
+
location (object) (Dataset)
|
| 154 |
+
nxpix (79,) (int64) (Dataset)
|
| 155 |
+
nypix (79,) (int64) (Dataset)
|
| 156 |
+
reference_images/ (Group)
|
| 157 |
+
roi_ids (79,) (int64) (Dataset)
|
| 158 |
+
roi_sizes (79,) (int64) (Dataset)
|
| 159 |
+
roi_sizes_um2 (79,) (float64) (Dataset)
|
| 160 |
+
session_info/ (Group)
|
| 161 |
+
presentation_sequence/ (Group)
|
| 162 |
+
absolute_start_time (2,) (object) (Dataset)
|
| 163 |
+
id (2,) (int64) (Dataset)
|
| 164 |
+
presentation_order (2,) (int64) (Dataset)
|
| 165 |
+
relative_start_time (2,) (float64) (Dataset)
|
| 166 |
+
stimulus_condition (2,) (object) (Dataset)
|
| 167 |
+
spatial/ (Group)
|
| 168 |
+
spatial_locations/ (Group)
|
| 169 |
+
field_temporal_nasal_pos_um (79,) (float64) (Dataset)
|
| 170 |
+
field_ventral_dorsal_pos_um (79,) (float64) (Dataset)
|
| 171 |
+
id (79,) (int64) (Dataset)
|
| 172 |
+
roi_id (79,) (int64) (Dataset)
|
| 173 |
+
roi_table_link (79,) (int64) (Dataset)
|
| 174 |
+
temporal_nasal_pos_um (79,) (float64) (Dataset)
|
| 175 |
+
ventral_dorsal_pos_um (79,) (float64) (Dataset)
|
| 176 |
+
session_description (object) (Dataset)
|
| 177 |
+
session_start_time (object) (Dataset)
|
| 178 |
+
specifications/ (Group)
|
| 179 |
+
core/ (Group)
|
| 180 |
+
2.8.0/ (Group)
|
| 181 |
+
namespace (object) (Dataset)
|
| 182 |
+
nwb.base (object) (Dataset)
|
| 183 |
+
nwb.behavior (object) (Dataset)
|
| 184 |
+
nwb.device (object) (Dataset)
|
| 185 |
+
nwb.ecephys (object) (Dataset)
|
| 186 |
+
nwb.epoch (object) (Dataset)
|
| 187 |
+
nwb.file (object) (Dataset)
|
| 188 |
+
nwb.icephys (object) (Dataset)
|
| 189 |
+
nwb.image (object) (Dataset)
|
| 190 |
+
nwb.misc (object) (Dataset)
|
| 191 |
+
nwb.ogen (object) (Dataset)
|
| 192 |
+
nwb.ophys (object) (Dataset)
|
| 193 |
+
nwb.retinotopy (object) (Dataset)
|
| 194 |
+
experiment-metadata/ (Group)
|
| 195 |
+
0.1.0/ (Group)
|
| 196 |
+
experiment_metadata.extensions (object) (Dataset)
|
| 197 |
+
namespace (object) (Dataset)
|
| 198 |
+
hdmf-common/ (Group)
|
| 199 |
+
1.8.0/ (Group)
|
| 200 |
+
base (object) (Dataset)
|
| 201 |
+
namespace (object) (Dataset)
|
| 202 |
+
sparse (object) (Dataset)
|
| 203 |
+
table (object) (Dataset)
|
| 204 |
+
hdmf-experimental/ (Group)
|
| 205 |
+
0.5.0/ (Group)
|
| 206 |
+
experimental (object) (Dataset)
|
| 207 |
+
namespace (object) (Dataset)
|
| 208 |
+
resources (object) (Dataset)
|
| 209 |
+
stimulus/ (Group)
|
| 210 |
+
presentation/ (Group)
|
| 211 |
+
chirp_stimulus/ (Group)
|
| 212 |
+
data (0, 0, 0) (uint8) (Dataset)
|
| 213 |
+
dimension (2,) (int64) (Dataset)
|
| 214 |
+
external_file (1,) (object) (Dataset)
|
| 215 |
+
format (object) (Dataset)
|
| 216 |
+
starting_time (float64) (Dataset)
|
| 217 |
+
movingbar_stimulus/ (Group)
|
| 218 |
+
data (0, 0, 0) (uint8) (Dataset)
|
| 219 |
+
dimension (2,) (int64) (Dataset)
|
| 220 |
+
external_file (1,) (object) (Dataset)
|
| 221 |
+
format (object) (Dataset)
|
| 222 |
+
starting_time (float64) (Dataset)
|
| 223 |
+
templates/ (Group)
|
| 224 |
+
timestamps_reference_time (object) (Dataset)
|
session_Experimenter_2_2023-09-05/experiment_1_LR/field_RGC2_structure.txt
ADDED
|
@@ -0,0 +1,224 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
NWB File Structure Report
|
| 2 |
+
========================
|
| 3 |
+
File: field_RGC2.nwb
|
| 4 |
+
Size: 27.23 MB
|
| 5 |
+
Generated: 2025-10-31 16:20:35
|
| 6 |
+
|
| 7 |
+
Structure:
|
| 8 |
+
----------
|
| 9 |
+
acquisition/ (Group)
|
| 10 |
+
TwoPhotonSeries_Cond_control_chirp_Pres_1/ (Group)
|
| 11 |
+
data (1610, 64, 64) (uint16) (Dataset)
|
| 12 |
+
imaging_plane/ (Group)
|
| 13 |
+
OpticalChannel/ (Group)
|
| 14 |
+
description (object) (Dataset)
|
| 15 |
+
emission_lambda (float64) (Dataset)
|
| 16 |
+
description (object) (Dataset)
|
| 17 |
+
device/ (Group)
|
| 18 |
+
excitation_lambda (float64) (Dataset)
|
| 19 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 20 |
+
imaging_rate (float64) (Dataset)
|
| 21 |
+
indicator (object) (Dataset)
|
| 22 |
+
location (object) (Dataset)
|
| 23 |
+
timestamps (1610,) (float64) (Dataset)
|
| 24 |
+
TwoPhotonSeries_Cond_control_movingbar_Pres_1/ (Group)
|
| 25 |
+
data (970, 64, 64) (uint16) (Dataset)
|
| 26 |
+
imaging_plane/ (Group)
|
| 27 |
+
OpticalChannel/ (Group)
|
| 28 |
+
description (object) (Dataset)
|
| 29 |
+
emission_lambda (float64) (Dataset)
|
| 30 |
+
description (object) (Dataset)
|
| 31 |
+
device/ (Group)
|
| 32 |
+
excitation_lambda (float64) (Dataset)
|
| 33 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 34 |
+
imaging_rate (float64) (Dataset)
|
| 35 |
+
indicator (object) (Dataset)
|
| 36 |
+
location (object) (Dataset)
|
| 37 |
+
timestamps (970,) (float64) (Dataset)
|
| 38 |
+
analysis/ (Group)
|
| 39 |
+
file_create_date (1,) (object) (Dataset)
|
| 40 |
+
general/ (Group)
|
| 41 |
+
devices/ (Group)
|
| 42 |
+
Microscope/ (Group)
|
| 43 |
+
experiment_metadata/ (Group)
|
| 44 |
+
experiment_number (object) (Dataset)
|
| 45 |
+
eye (object) (Dataset)
|
| 46 |
+
preparation_orientation (object) (Dataset)
|
| 47 |
+
setup_id (object) (Dataset)
|
| 48 |
+
experimenter (1,) (object) (Dataset)
|
| 49 |
+
institution (object) (Dataset)
|
| 50 |
+
lab (object) (Dataset)
|
| 51 |
+
optophysiology/ (Group)
|
| 52 |
+
ImagingPlane/ (Group)
|
| 53 |
+
OpticalChannel/ (Group)
|
| 54 |
+
description (object) (Dataset)
|
| 55 |
+
emission_lambda (float64) (Dataset)
|
| 56 |
+
description (object) (Dataset)
|
| 57 |
+
device/ (Group)
|
| 58 |
+
excitation_lambda (float64) (Dataset)
|
| 59 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 60 |
+
imaging_rate (float64) (Dataset)
|
| 61 |
+
indicator (object) (Dataset)
|
| 62 |
+
location (object) (Dataset)
|
| 63 |
+
related_publications (1,) (object) (Dataset)
|
| 64 |
+
subject/ (Group)
|
| 65 |
+
age (object) (Dataset)
|
| 66 |
+
date_of_birth (object) (Dataset)
|
| 67 |
+
genotype (object) (Dataset)
|
| 68 |
+
sex (object) (Dataset)
|
| 69 |
+
species (object) (Dataset)
|
| 70 |
+
identifier (object) (Dataset)
|
| 71 |
+
processing/ (Group)
|
| 72 |
+
Condition_control/ (Group)
|
| 73 |
+
cell_types/ (Group)
|
| 74 |
+
cluster_id (118,) (int64) (Dataset)
|
| 75 |
+
condition (118,) (object) (Dataset)
|
| 76 |
+
group_id (118,) (int64) (Dataset)
|
| 77 |
+
id (118,) (int64) (Dataset)
|
| 78 |
+
preproc_bar (118, 32) (float64) (Dataset)
|
| 79 |
+
preproc_chirp (118, 249) (float64) (Dataset)
|
| 80 |
+
prob_class (118,) (float64) (Dataset)
|
| 81 |
+
prob_cluster (118,) (float64) (Dataset)
|
| 82 |
+
prob_group (118,) (float64) (Dataset)
|
| 83 |
+
prob_supergroup (118,) (float64) (Dataset)
|
| 84 |
+
probs_per_cluster (118, 75) (float64) (Dataset)
|
| 85 |
+
roi_id (118,) (int64) (Dataset)
|
| 86 |
+
roi_table_link (118,) (int64) (Dataset)
|
| 87 |
+
supergroup (118,) (object) (Dataset)
|
| 88 |
+
chirp_60Hz_average/ (Group)
|
| 89 |
+
data (1982, 118) (float64) (Dataset)
|
| 90 |
+
timestamps (1982,) (float64) (Dataset)
|
| 91 |
+
chirp_8Hz_average/ (Group)
|
| 92 |
+
data (259, 118) (float64) (Dataset)
|
| 93 |
+
timestamps (259,) (float64) (Dataset)
|
| 94 |
+
chirp_features/ (Group)
|
| 95 |
+
chirp_on_off_index (118,) (float64) (Dataset)
|
| 96 |
+
chirp_pres_qidx (118,) (float64) (Dataset)
|
| 97 |
+
chirp_qidx (118,) (float64) (Dataset)
|
| 98 |
+
chirp_transience_index (118,) (float64) (Dataset)
|
| 99 |
+
id (118,) (int64) (Dataset)
|
| 100 |
+
roi_id (118,) (int64) (Dataset)
|
| 101 |
+
roi_table_link (118,) (int64) (Dataset)
|
| 102 |
+
chirp_preprocessed_traces/ (Group)
|
| 103 |
+
data (1610, 118) (float64) (Dataset)
|
| 104 |
+
timestamps (1610,) (float64) (Dataset)
|
| 105 |
+
chirp_snippets/ (Group)
|
| 106 |
+
data (259, 118, 5) (float64) (Dataset)
|
| 107 |
+
timestamps (259,) (float64) (Dataset)
|
| 108 |
+
chirp_snippets_t0/ (Group)
|
| 109 |
+
id (1,) (int64) (Dataset)
|
| 110 |
+
snippets_t0_array (1, 5, 118) (float64) (Dataset)
|
| 111 |
+
chirp_triggertimes_snippets/ (Group)
|
| 112 |
+
data (2, 118, 5) (float64) (Dataset)
|
| 113 |
+
starting_time (float64) (Dataset)
|
| 114 |
+
movingbar_features/ (Group)
|
| 115 |
+
bar_ds_index (118,) (float64) (Dataset)
|
| 116 |
+
bar_ds_pvalue (118,) (float64) (Dataset)
|
| 117 |
+
bar_os_index (118,) (float64) (Dataset)
|
| 118 |
+
bar_os_pvalue (118,) (float64) (Dataset)
|
| 119 |
+
bar_pref_dir (118,) (float64) (Dataset)
|
| 120 |
+
bar_pref_or (118,) (float64) (Dataset)
|
| 121 |
+
bar_pres_qidx (118,) (float64) (Dataset)
|
| 122 |
+
bar_qidx (118,) (float64) (Dataset)
|
| 123 |
+
id (118,) (int64) (Dataset)
|
| 124 |
+
roi_id (118,) (int64) (Dataset)
|
| 125 |
+
roi_table_link (118,) (int64) (Dataset)
|
| 126 |
+
movingbar_preprocessed_traces/ (Group)
|
| 127 |
+
data (970, 118) (float64) (Dataset)
|
| 128 |
+
timestamps (970,) (float64) (Dataset)
|
| 129 |
+
movingbar_snippets/ (Group)
|
| 130 |
+
data (33, 118, 24) (float32) (Dataset)
|
| 131 |
+
timestamps (33,) (float64) (Dataset)
|
| 132 |
+
movingbar_snippets_t0/ (Group)
|
| 133 |
+
id (1,) (int64) (Dataset)
|
| 134 |
+
snippets_t0_array (1, 24, 118) (float64) (Dataset)
|
| 135 |
+
movingbar_triggertimes_snippets/ (Group)
|
| 136 |
+
data (1, 118, 24) (float32) (Dataset)
|
| 137 |
+
starting_time (float64) (Dataset)
|
| 138 |
+
rois/ (Group)
|
| 139 |
+
ImageSegmentation/ (Group)
|
| 140 |
+
ROI masks/ (Group)
|
| 141 |
+
id (118,) (int64) (Dataset)
|
| 142 |
+
image_mask (118, 64, 64) (bool) (Dataset)
|
| 143 |
+
imaging_plane/ (Group)
|
| 144 |
+
OpticalChannel/ (Group)
|
| 145 |
+
description (object) (Dataset)
|
| 146 |
+
emission_lambda (float64) (Dataset)
|
| 147 |
+
description (object) (Dataset)
|
| 148 |
+
device/ (Group)
|
| 149 |
+
excitation_lambda (float64) (Dataset)
|
| 150 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 151 |
+
imaging_rate (float64) (Dataset)
|
| 152 |
+
indicator (object) (Dataset)
|
| 153 |
+
location (object) (Dataset)
|
| 154 |
+
nxpix (118,) (int64) (Dataset)
|
| 155 |
+
nypix (118,) (int64) (Dataset)
|
| 156 |
+
reference_images/ (Group)
|
| 157 |
+
roi_ids (118,) (int64) (Dataset)
|
| 158 |
+
roi_sizes (118,) (int64) (Dataset)
|
| 159 |
+
roi_sizes_um2 (118,) (float64) (Dataset)
|
| 160 |
+
session_info/ (Group)
|
| 161 |
+
presentation_sequence/ (Group)
|
| 162 |
+
absolute_start_time (2,) (object) (Dataset)
|
| 163 |
+
id (2,) (int64) (Dataset)
|
| 164 |
+
presentation_order (2,) (int64) (Dataset)
|
| 165 |
+
relative_start_time (2,) (float64) (Dataset)
|
| 166 |
+
stimulus_condition (2,) (object) (Dataset)
|
| 167 |
+
spatial/ (Group)
|
| 168 |
+
spatial_locations/ (Group)
|
| 169 |
+
field_temporal_nasal_pos_um (118,) (float64) (Dataset)
|
| 170 |
+
field_ventral_dorsal_pos_um (118,) (float64) (Dataset)
|
| 171 |
+
id (118,) (int64) (Dataset)
|
| 172 |
+
roi_id (118,) (int64) (Dataset)
|
| 173 |
+
roi_table_link (118,) (int64) (Dataset)
|
| 174 |
+
temporal_nasal_pos_um (118,) (float64) (Dataset)
|
| 175 |
+
ventral_dorsal_pos_um (118,) (float64) (Dataset)
|
| 176 |
+
session_description (object) (Dataset)
|
| 177 |
+
session_start_time (object) (Dataset)
|
| 178 |
+
specifications/ (Group)
|
| 179 |
+
core/ (Group)
|
| 180 |
+
2.8.0/ (Group)
|
| 181 |
+
namespace (object) (Dataset)
|
| 182 |
+
nwb.base (object) (Dataset)
|
| 183 |
+
nwb.behavior (object) (Dataset)
|
| 184 |
+
nwb.device (object) (Dataset)
|
| 185 |
+
nwb.ecephys (object) (Dataset)
|
| 186 |
+
nwb.epoch (object) (Dataset)
|
| 187 |
+
nwb.file (object) (Dataset)
|
| 188 |
+
nwb.icephys (object) (Dataset)
|
| 189 |
+
nwb.image (object) (Dataset)
|
| 190 |
+
nwb.misc (object) (Dataset)
|
| 191 |
+
nwb.ogen (object) (Dataset)
|
| 192 |
+
nwb.ophys (object) (Dataset)
|
| 193 |
+
nwb.retinotopy (object) (Dataset)
|
| 194 |
+
experiment-metadata/ (Group)
|
| 195 |
+
0.1.0/ (Group)
|
| 196 |
+
experiment_metadata.extensions (object) (Dataset)
|
| 197 |
+
namespace (object) (Dataset)
|
| 198 |
+
hdmf-common/ (Group)
|
| 199 |
+
1.8.0/ (Group)
|
| 200 |
+
base (object) (Dataset)
|
| 201 |
+
namespace (object) (Dataset)
|
| 202 |
+
sparse (object) (Dataset)
|
| 203 |
+
table (object) (Dataset)
|
| 204 |
+
hdmf-experimental/ (Group)
|
| 205 |
+
0.5.0/ (Group)
|
| 206 |
+
experimental (object) (Dataset)
|
| 207 |
+
namespace (object) (Dataset)
|
| 208 |
+
resources (object) (Dataset)
|
| 209 |
+
stimulus/ (Group)
|
| 210 |
+
presentation/ (Group)
|
| 211 |
+
chirp_stimulus/ (Group)
|
| 212 |
+
data (0, 0, 0) (uint8) (Dataset)
|
| 213 |
+
dimension (2,) (int64) (Dataset)
|
| 214 |
+
external_file (1,) (object) (Dataset)
|
| 215 |
+
format (object) (Dataset)
|
| 216 |
+
starting_time (float64) (Dataset)
|
| 217 |
+
movingbar_stimulus/ (Group)
|
| 218 |
+
data (0, 0, 0) (uint8) (Dataset)
|
| 219 |
+
dimension (2,) (int64) (Dataset)
|
| 220 |
+
external_file (1,) (object) (Dataset)
|
| 221 |
+
format (object) (Dataset)
|
| 222 |
+
starting_time (float64) (Dataset)
|
| 223 |
+
templates/ (Group)
|
| 224 |
+
timestamps_reference_time (object) (Dataset)
|
session_Experimenter_2_2023-09-05/experiment_1_LR/field_RGC3_structure.txt
ADDED
|
@@ -0,0 +1,224 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
NWB File Structure Report
|
| 2 |
+
========================
|
| 3 |
+
File: field_RGC3.nwb
|
| 4 |
+
Size: 27.59 MB
|
| 5 |
+
Generated: 2025-10-31 16:20:38
|
| 6 |
+
|
| 7 |
+
Structure:
|
| 8 |
+
----------
|
| 9 |
+
acquisition/ (Group)
|
| 10 |
+
TwoPhotonSeries_Cond_control_chirp_Pres_1/ (Group)
|
| 11 |
+
data (1707, 64, 64) (uint16) (Dataset)
|
| 12 |
+
imaging_plane/ (Group)
|
| 13 |
+
OpticalChannel/ (Group)
|
| 14 |
+
description (object) (Dataset)
|
| 15 |
+
emission_lambda (float64) (Dataset)
|
| 16 |
+
description (object) (Dataset)
|
| 17 |
+
device/ (Group)
|
| 18 |
+
excitation_lambda (float64) (Dataset)
|
| 19 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 20 |
+
imaging_rate (float64) (Dataset)
|
| 21 |
+
indicator (object) (Dataset)
|
| 22 |
+
location (object) (Dataset)
|
| 23 |
+
timestamps (1707,) (float64) (Dataset)
|
| 24 |
+
TwoPhotonSeries_Cond_control_movingbar_Pres_1/ (Group)
|
| 25 |
+
data (968, 64, 64) (uint16) (Dataset)
|
| 26 |
+
imaging_plane/ (Group)
|
| 27 |
+
OpticalChannel/ (Group)
|
| 28 |
+
description (object) (Dataset)
|
| 29 |
+
emission_lambda (float64) (Dataset)
|
| 30 |
+
description (object) (Dataset)
|
| 31 |
+
device/ (Group)
|
| 32 |
+
excitation_lambda (float64) (Dataset)
|
| 33 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 34 |
+
imaging_rate (float64) (Dataset)
|
| 35 |
+
indicator (object) (Dataset)
|
| 36 |
+
location (object) (Dataset)
|
| 37 |
+
timestamps (968,) (float64) (Dataset)
|
| 38 |
+
analysis/ (Group)
|
| 39 |
+
file_create_date (1,) (object) (Dataset)
|
| 40 |
+
general/ (Group)
|
| 41 |
+
devices/ (Group)
|
| 42 |
+
Microscope/ (Group)
|
| 43 |
+
experiment_metadata/ (Group)
|
| 44 |
+
experiment_number (object) (Dataset)
|
| 45 |
+
eye (object) (Dataset)
|
| 46 |
+
preparation_orientation (object) (Dataset)
|
| 47 |
+
setup_id (object) (Dataset)
|
| 48 |
+
experimenter (1,) (object) (Dataset)
|
| 49 |
+
institution (object) (Dataset)
|
| 50 |
+
lab (object) (Dataset)
|
| 51 |
+
optophysiology/ (Group)
|
| 52 |
+
ImagingPlane/ (Group)
|
| 53 |
+
OpticalChannel/ (Group)
|
| 54 |
+
description (object) (Dataset)
|
| 55 |
+
emission_lambda (float64) (Dataset)
|
| 56 |
+
description (object) (Dataset)
|
| 57 |
+
device/ (Group)
|
| 58 |
+
excitation_lambda (float64) (Dataset)
|
| 59 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 60 |
+
imaging_rate (float64) (Dataset)
|
| 61 |
+
indicator (object) (Dataset)
|
| 62 |
+
location (object) (Dataset)
|
| 63 |
+
related_publications (1,) (object) (Dataset)
|
| 64 |
+
subject/ (Group)
|
| 65 |
+
age (object) (Dataset)
|
| 66 |
+
date_of_birth (object) (Dataset)
|
| 67 |
+
genotype (object) (Dataset)
|
| 68 |
+
sex (object) (Dataset)
|
| 69 |
+
species (object) (Dataset)
|
| 70 |
+
identifier (object) (Dataset)
|
| 71 |
+
processing/ (Group)
|
| 72 |
+
Condition_control/ (Group)
|
| 73 |
+
cell_types/ (Group)
|
| 74 |
+
cluster_id (110,) (int64) (Dataset)
|
| 75 |
+
condition (110,) (object) (Dataset)
|
| 76 |
+
group_id (110,) (int64) (Dataset)
|
| 77 |
+
id (110,) (int64) (Dataset)
|
| 78 |
+
preproc_bar (110, 32) (float64) (Dataset)
|
| 79 |
+
preproc_chirp (110, 249) (float64) (Dataset)
|
| 80 |
+
prob_class (110,) (float64) (Dataset)
|
| 81 |
+
prob_cluster (110,) (float64) (Dataset)
|
| 82 |
+
prob_group (110,) (float64) (Dataset)
|
| 83 |
+
prob_supergroup (110,) (float64) (Dataset)
|
| 84 |
+
probs_per_cluster (110, 75) (float64) (Dataset)
|
| 85 |
+
roi_id (110,) (int64) (Dataset)
|
| 86 |
+
roi_table_link (110,) (int64) (Dataset)
|
| 87 |
+
supergroup (110,) (object) (Dataset)
|
| 88 |
+
chirp_60Hz_average/ (Group)
|
| 89 |
+
data (1982, 110) (float64) (Dataset)
|
| 90 |
+
timestamps (1982,) (float64) (Dataset)
|
| 91 |
+
chirp_8Hz_average/ (Group)
|
| 92 |
+
data (259, 110) (float64) (Dataset)
|
| 93 |
+
timestamps (259,) (float64) (Dataset)
|
| 94 |
+
chirp_features/ (Group)
|
| 95 |
+
chirp_on_off_index (110,) (float64) (Dataset)
|
| 96 |
+
chirp_pres_qidx (110,) (float64) (Dataset)
|
| 97 |
+
chirp_qidx (110,) (float64) (Dataset)
|
| 98 |
+
chirp_transience_index (110,) (float64) (Dataset)
|
| 99 |
+
id (110,) (int64) (Dataset)
|
| 100 |
+
roi_id (110,) (int64) (Dataset)
|
| 101 |
+
roi_table_link (110,) (int64) (Dataset)
|
| 102 |
+
chirp_preprocessed_traces/ (Group)
|
| 103 |
+
data (1707, 110) (float64) (Dataset)
|
| 104 |
+
timestamps (1707,) (float64) (Dataset)
|
| 105 |
+
chirp_snippets/ (Group)
|
| 106 |
+
data (259, 110, 5) (float64) (Dataset)
|
| 107 |
+
timestamps (259,) (float64) (Dataset)
|
| 108 |
+
chirp_snippets_t0/ (Group)
|
| 109 |
+
id (1,) (int64) (Dataset)
|
| 110 |
+
snippets_t0_array (1, 5, 110) (float64) (Dataset)
|
| 111 |
+
chirp_triggertimes_snippets/ (Group)
|
| 112 |
+
data (2, 110, 5) (float64) (Dataset)
|
| 113 |
+
starting_time (float64) (Dataset)
|
| 114 |
+
movingbar_features/ (Group)
|
| 115 |
+
bar_ds_index (110,) (float64) (Dataset)
|
| 116 |
+
bar_ds_pvalue (110,) (float64) (Dataset)
|
| 117 |
+
bar_os_index (110,) (float64) (Dataset)
|
| 118 |
+
bar_os_pvalue (110,) (float64) (Dataset)
|
| 119 |
+
bar_pref_dir (110,) (float64) (Dataset)
|
| 120 |
+
bar_pref_or (110,) (float64) (Dataset)
|
| 121 |
+
bar_pres_qidx (110,) (float64) (Dataset)
|
| 122 |
+
bar_qidx (110,) (float64) (Dataset)
|
| 123 |
+
id (110,) (int64) (Dataset)
|
| 124 |
+
roi_id (110,) (int64) (Dataset)
|
| 125 |
+
roi_table_link (110,) (int64) (Dataset)
|
| 126 |
+
movingbar_preprocessed_traces/ (Group)
|
| 127 |
+
data (968, 110) (float64) (Dataset)
|
| 128 |
+
timestamps (968,) (float64) (Dataset)
|
| 129 |
+
movingbar_snippets/ (Group)
|
| 130 |
+
data (33, 110, 24) (float32) (Dataset)
|
| 131 |
+
timestamps (33,) (float64) (Dataset)
|
| 132 |
+
movingbar_snippets_t0/ (Group)
|
| 133 |
+
id (1,) (int64) (Dataset)
|
| 134 |
+
snippets_t0_array (1, 24, 110) (float64) (Dataset)
|
| 135 |
+
movingbar_triggertimes_snippets/ (Group)
|
| 136 |
+
data (1, 110, 24) (float32) (Dataset)
|
| 137 |
+
starting_time (float64) (Dataset)
|
| 138 |
+
rois/ (Group)
|
| 139 |
+
ImageSegmentation/ (Group)
|
| 140 |
+
ROI masks/ (Group)
|
| 141 |
+
id (110,) (int64) (Dataset)
|
| 142 |
+
image_mask (110, 64, 64) (bool) (Dataset)
|
| 143 |
+
imaging_plane/ (Group)
|
| 144 |
+
OpticalChannel/ (Group)
|
| 145 |
+
description (object) (Dataset)
|
| 146 |
+
emission_lambda (float64) (Dataset)
|
| 147 |
+
description (object) (Dataset)
|
| 148 |
+
device/ (Group)
|
| 149 |
+
excitation_lambda (float64) (Dataset)
|
| 150 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 151 |
+
imaging_rate (float64) (Dataset)
|
| 152 |
+
indicator (object) (Dataset)
|
| 153 |
+
location (object) (Dataset)
|
| 154 |
+
nxpix (110,) (int64) (Dataset)
|
| 155 |
+
nypix (110,) (int64) (Dataset)
|
| 156 |
+
reference_images/ (Group)
|
| 157 |
+
roi_ids (110,) (int64) (Dataset)
|
| 158 |
+
roi_sizes (110,) (int64) (Dataset)
|
| 159 |
+
roi_sizes_um2 (110,) (float64) (Dataset)
|
| 160 |
+
session_info/ (Group)
|
| 161 |
+
presentation_sequence/ (Group)
|
| 162 |
+
absolute_start_time (2,) (object) (Dataset)
|
| 163 |
+
id (2,) (int64) (Dataset)
|
| 164 |
+
presentation_order (2,) (int64) (Dataset)
|
| 165 |
+
relative_start_time (2,) (float64) (Dataset)
|
| 166 |
+
stimulus_condition (2,) (object) (Dataset)
|
| 167 |
+
spatial/ (Group)
|
| 168 |
+
spatial_locations/ (Group)
|
| 169 |
+
field_temporal_nasal_pos_um (110,) (float64) (Dataset)
|
| 170 |
+
field_ventral_dorsal_pos_um (110,) (float64) (Dataset)
|
| 171 |
+
id (110,) (int64) (Dataset)
|
| 172 |
+
roi_id (110,) (int64) (Dataset)
|
| 173 |
+
roi_table_link (110,) (int64) (Dataset)
|
| 174 |
+
temporal_nasal_pos_um (110,) (float64) (Dataset)
|
| 175 |
+
ventral_dorsal_pos_um (110,) (float64) (Dataset)
|
| 176 |
+
session_description (object) (Dataset)
|
| 177 |
+
session_start_time (object) (Dataset)
|
| 178 |
+
specifications/ (Group)
|
| 179 |
+
core/ (Group)
|
| 180 |
+
2.8.0/ (Group)
|
| 181 |
+
namespace (object) (Dataset)
|
| 182 |
+
nwb.base (object) (Dataset)
|
| 183 |
+
nwb.behavior (object) (Dataset)
|
| 184 |
+
nwb.device (object) (Dataset)
|
| 185 |
+
nwb.ecephys (object) (Dataset)
|
| 186 |
+
nwb.epoch (object) (Dataset)
|
| 187 |
+
nwb.file (object) (Dataset)
|
| 188 |
+
nwb.icephys (object) (Dataset)
|
| 189 |
+
nwb.image (object) (Dataset)
|
| 190 |
+
nwb.misc (object) (Dataset)
|
| 191 |
+
nwb.ogen (object) (Dataset)
|
| 192 |
+
nwb.ophys (object) (Dataset)
|
| 193 |
+
nwb.retinotopy (object) (Dataset)
|
| 194 |
+
experiment-metadata/ (Group)
|
| 195 |
+
0.1.0/ (Group)
|
| 196 |
+
experiment_metadata.extensions (object) (Dataset)
|
| 197 |
+
namespace (object) (Dataset)
|
| 198 |
+
hdmf-common/ (Group)
|
| 199 |
+
1.8.0/ (Group)
|
| 200 |
+
base (object) (Dataset)
|
| 201 |
+
namespace (object) (Dataset)
|
| 202 |
+
sparse (object) (Dataset)
|
| 203 |
+
table (object) (Dataset)
|
| 204 |
+
hdmf-experimental/ (Group)
|
| 205 |
+
0.5.0/ (Group)
|
| 206 |
+
experimental (object) (Dataset)
|
| 207 |
+
namespace (object) (Dataset)
|
| 208 |
+
resources (object) (Dataset)
|
| 209 |
+
stimulus/ (Group)
|
| 210 |
+
presentation/ (Group)
|
| 211 |
+
chirp_stimulus/ (Group)
|
| 212 |
+
data (0, 0, 0) (uint8) (Dataset)
|
| 213 |
+
dimension (2,) (int64) (Dataset)
|
| 214 |
+
external_file (1,) (object) (Dataset)
|
| 215 |
+
format (object) (Dataset)
|
| 216 |
+
starting_time (float64) (Dataset)
|
| 217 |
+
movingbar_stimulus/ (Group)
|
| 218 |
+
data (0, 0, 0) (uint8) (Dataset)
|
| 219 |
+
dimension (2,) (int64) (Dataset)
|
| 220 |
+
external_file (1,) (object) (Dataset)
|
| 221 |
+
format (object) (Dataset)
|
| 222 |
+
starting_time (float64) (Dataset)
|
| 223 |
+
templates/ (Group)
|
| 224 |
+
timestamps_reference_time (object) (Dataset)
|
session_Experimenter_2_2023-09-05/experiment_1_LR/field_RGC4_structure.txt
ADDED
|
@@ -0,0 +1,224 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
NWB File Structure Report
|
| 2 |
+
========================
|
| 3 |
+
File: field_RGC4.nwb
|
| 4 |
+
Size: 31.39 MB
|
| 5 |
+
Generated: 2025-10-31 16:20:40
|
| 6 |
+
|
| 7 |
+
Structure:
|
| 8 |
+
----------
|
| 9 |
+
acquisition/ (Group)
|
| 10 |
+
TwoPhotonSeries_Cond_control_chirp_Pres_1/ (Group)
|
| 11 |
+
data (2000, 64, 64) (uint16) (Dataset)
|
| 12 |
+
imaging_plane/ (Group)
|
| 13 |
+
OpticalChannel/ (Group)
|
| 14 |
+
description (object) (Dataset)
|
| 15 |
+
emission_lambda (float64) (Dataset)
|
| 16 |
+
description (object) (Dataset)
|
| 17 |
+
device/ (Group)
|
| 18 |
+
excitation_lambda (float64) (Dataset)
|
| 19 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 20 |
+
imaging_rate (float64) (Dataset)
|
| 21 |
+
indicator (object) (Dataset)
|
| 22 |
+
location (object) (Dataset)
|
| 23 |
+
timestamps (2000,) (float64) (Dataset)
|
| 24 |
+
TwoPhotonSeries_Cond_control_movingbar_Pres_1/ (Group)
|
| 25 |
+
data (1149, 64, 64) (uint16) (Dataset)
|
| 26 |
+
imaging_plane/ (Group)
|
| 27 |
+
OpticalChannel/ (Group)
|
| 28 |
+
description (object) (Dataset)
|
| 29 |
+
emission_lambda (float64) (Dataset)
|
| 30 |
+
description (object) (Dataset)
|
| 31 |
+
device/ (Group)
|
| 32 |
+
excitation_lambda (float64) (Dataset)
|
| 33 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 34 |
+
imaging_rate (float64) (Dataset)
|
| 35 |
+
indicator (object) (Dataset)
|
| 36 |
+
location (object) (Dataset)
|
| 37 |
+
timestamps (1149,) (float64) (Dataset)
|
| 38 |
+
analysis/ (Group)
|
| 39 |
+
file_create_date (1,) (object) (Dataset)
|
| 40 |
+
general/ (Group)
|
| 41 |
+
devices/ (Group)
|
| 42 |
+
Microscope/ (Group)
|
| 43 |
+
experiment_metadata/ (Group)
|
| 44 |
+
experiment_number (object) (Dataset)
|
| 45 |
+
eye (object) (Dataset)
|
| 46 |
+
preparation_orientation (object) (Dataset)
|
| 47 |
+
setup_id (object) (Dataset)
|
| 48 |
+
experimenter (1,) (object) (Dataset)
|
| 49 |
+
institution (object) (Dataset)
|
| 50 |
+
lab (object) (Dataset)
|
| 51 |
+
optophysiology/ (Group)
|
| 52 |
+
ImagingPlane/ (Group)
|
| 53 |
+
OpticalChannel/ (Group)
|
| 54 |
+
description (object) (Dataset)
|
| 55 |
+
emission_lambda (float64) (Dataset)
|
| 56 |
+
description (object) (Dataset)
|
| 57 |
+
device/ (Group)
|
| 58 |
+
excitation_lambda (float64) (Dataset)
|
| 59 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 60 |
+
imaging_rate (float64) (Dataset)
|
| 61 |
+
indicator (object) (Dataset)
|
| 62 |
+
location (object) (Dataset)
|
| 63 |
+
related_publications (1,) (object) (Dataset)
|
| 64 |
+
subject/ (Group)
|
| 65 |
+
age (object) (Dataset)
|
| 66 |
+
date_of_birth (object) (Dataset)
|
| 67 |
+
genotype (object) (Dataset)
|
| 68 |
+
sex (object) (Dataset)
|
| 69 |
+
species (object) (Dataset)
|
| 70 |
+
identifier (object) (Dataset)
|
| 71 |
+
processing/ (Group)
|
| 72 |
+
Condition_control/ (Group)
|
| 73 |
+
cell_types/ (Group)
|
| 74 |
+
cluster_id (105,) (int64) (Dataset)
|
| 75 |
+
condition (105,) (object) (Dataset)
|
| 76 |
+
group_id (105,) (int64) (Dataset)
|
| 77 |
+
id (105,) (int64) (Dataset)
|
| 78 |
+
preproc_bar (105, 32) (float64) (Dataset)
|
| 79 |
+
preproc_chirp (105, 249) (float64) (Dataset)
|
| 80 |
+
prob_class (105,) (float64) (Dataset)
|
| 81 |
+
prob_cluster (105,) (float64) (Dataset)
|
| 82 |
+
prob_group (105,) (float64) (Dataset)
|
| 83 |
+
prob_supergroup (105,) (float64) (Dataset)
|
| 84 |
+
probs_per_cluster (105, 75) (float64) (Dataset)
|
| 85 |
+
roi_id (105,) (int64) (Dataset)
|
| 86 |
+
roi_table_link (105,) (int64) (Dataset)
|
| 87 |
+
supergroup (105,) (object) (Dataset)
|
| 88 |
+
chirp_60Hz_average/ (Group)
|
| 89 |
+
data (1982, 105) (float64) (Dataset)
|
| 90 |
+
timestamps (1982,) (float64) (Dataset)
|
| 91 |
+
chirp_8Hz_average/ (Group)
|
| 92 |
+
data (259, 105) (float64) (Dataset)
|
| 93 |
+
timestamps (259,) (float64) (Dataset)
|
| 94 |
+
chirp_features/ (Group)
|
| 95 |
+
chirp_on_off_index (105,) (float64) (Dataset)
|
| 96 |
+
chirp_pres_qidx (105,) (float64) (Dataset)
|
| 97 |
+
chirp_qidx (105,) (float64) (Dataset)
|
| 98 |
+
chirp_transience_index (105,) (float64) (Dataset)
|
| 99 |
+
id (105,) (int64) (Dataset)
|
| 100 |
+
roi_id (105,) (int64) (Dataset)
|
| 101 |
+
roi_table_link (105,) (int64) (Dataset)
|
| 102 |
+
chirp_preprocessed_traces/ (Group)
|
| 103 |
+
data (2000, 105) (float64) (Dataset)
|
| 104 |
+
timestamps (2000,) (float64) (Dataset)
|
| 105 |
+
chirp_snippets/ (Group)
|
| 106 |
+
data (259, 105, 5) (float64) (Dataset)
|
| 107 |
+
timestamps (259,) (float64) (Dataset)
|
| 108 |
+
chirp_snippets_t0/ (Group)
|
| 109 |
+
id (1,) (int64) (Dataset)
|
| 110 |
+
snippets_t0_array (1, 5, 105) (float64) (Dataset)
|
| 111 |
+
chirp_triggertimes_snippets/ (Group)
|
| 112 |
+
data (2, 105, 5) (float64) (Dataset)
|
| 113 |
+
starting_time (float64) (Dataset)
|
| 114 |
+
movingbar_features/ (Group)
|
| 115 |
+
bar_ds_index (105,) (float64) (Dataset)
|
| 116 |
+
bar_ds_pvalue (105,) (float64) (Dataset)
|
| 117 |
+
bar_os_index (105,) (float64) (Dataset)
|
| 118 |
+
bar_os_pvalue (105,) (float64) (Dataset)
|
| 119 |
+
bar_pref_dir (105,) (float64) (Dataset)
|
| 120 |
+
bar_pref_or (105,) (float64) (Dataset)
|
| 121 |
+
bar_pres_qidx (105,) (float64) (Dataset)
|
| 122 |
+
bar_qidx (105,) (float64) (Dataset)
|
| 123 |
+
id (105,) (int64) (Dataset)
|
| 124 |
+
roi_id (105,) (int64) (Dataset)
|
| 125 |
+
roi_table_link (105,) (int64) (Dataset)
|
| 126 |
+
movingbar_preprocessed_traces/ (Group)
|
| 127 |
+
data (1149, 105) (float64) (Dataset)
|
| 128 |
+
timestamps (1149,) (float64) (Dataset)
|
| 129 |
+
movingbar_snippets/ (Group)
|
| 130 |
+
data (33, 105, 24) (float32) (Dataset)
|
| 131 |
+
timestamps (33,) (float64) (Dataset)
|
| 132 |
+
movingbar_snippets_t0/ (Group)
|
| 133 |
+
id (1,) (int64) (Dataset)
|
| 134 |
+
snippets_t0_array (1, 24, 105) (float64) (Dataset)
|
| 135 |
+
movingbar_triggertimes_snippets/ (Group)
|
| 136 |
+
data (1, 105, 24) (float32) (Dataset)
|
| 137 |
+
starting_time (float64) (Dataset)
|
| 138 |
+
rois/ (Group)
|
| 139 |
+
ImageSegmentation/ (Group)
|
| 140 |
+
ROI masks/ (Group)
|
| 141 |
+
id (105,) (int64) (Dataset)
|
| 142 |
+
image_mask (105, 64, 64) (bool) (Dataset)
|
| 143 |
+
imaging_plane/ (Group)
|
| 144 |
+
OpticalChannel/ (Group)
|
| 145 |
+
description (object) (Dataset)
|
| 146 |
+
emission_lambda (float64) (Dataset)
|
| 147 |
+
description (object) (Dataset)
|
| 148 |
+
device/ (Group)
|
| 149 |
+
excitation_lambda (float64) (Dataset)
|
| 150 |
+
grid_spacing (2,) (float64) (Dataset)
|
| 151 |
+
imaging_rate (float64) (Dataset)
|
| 152 |
+
indicator (object) (Dataset)
|
| 153 |
+
location (object) (Dataset)
|
| 154 |
+
nxpix (105,) (int64) (Dataset)
|
| 155 |
+
nypix (105,) (int64) (Dataset)
|
| 156 |
+
reference_images/ (Group)
|
| 157 |
+
roi_ids (105,) (int64) (Dataset)
|
| 158 |
+
roi_sizes (105,) (int64) (Dataset)
|
| 159 |
+
roi_sizes_um2 (105,) (float64) (Dataset)
|
| 160 |
+
session_info/ (Group)
|
| 161 |
+
presentation_sequence/ (Group)
|
| 162 |
+
absolute_start_time (2,) (object) (Dataset)
|
| 163 |
+
id (2,) (int64) (Dataset)
|
| 164 |
+
presentation_order (2,) (int64) (Dataset)
|
| 165 |
+
relative_start_time (2,) (float64) (Dataset)
|
| 166 |
+
stimulus_condition (2,) (object) (Dataset)
|
| 167 |
+
spatial/ (Group)
|
| 168 |
+
spatial_locations/ (Group)
|
| 169 |
+
field_temporal_nasal_pos_um (105,) (float64) (Dataset)
|
| 170 |
+
field_ventral_dorsal_pos_um (105,) (float64) (Dataset)
|
| 171 |
+
id (105,) (int64) (Dataset)
|
| 172 |
+
roi_id (105,) (int64) (Dataset)
|
| 173 |
+
roi_table_link (105,) (int64) (Dataset)
|
| 174 |
+
temporal_nasal_pos_um (105,) (float64) (Dataset)
|
| 175 |
+
ventral_dorsal_pos_um (105,) (float64) (Dataset)
|
| 176 |
+
session_description (object) (Dataset)
|
| 177 |
+
session_start_time (object) (Dataset)
|
| 178 |
+
specifications/ (Group)
|
| 179 |
+
core/ (Group)
|
| 180 |
+
2.8.0/ (Group)
|
| 181 |
+
namespace (object) (Dataset)
|
| 182 |
+
nwb.base (object) (Dataset)
|
| 183 |
+
nwb.behavior (object) (Dataset)
|
| 184 |
+
nwb.device (object) (Dataset)
|
| 185 |
+
nwb.ecephys (object) (Dataset)
|
| 186 |
+
nwb.epoch (object) (Dataset)
|
| 187 |
+
nwb.file (object) (Dataset)
|
| 188 |
+
nwb.icephys (object) (Dataset)
|
| 189 |
+
nwb.image (object) (Dataset)
|
| 190 |
+
nwb.misc (object) (Dataset)
|
| 191 |
+
nwb.ogen (object) (Dataset)
|
| 192 |
+
nwb.ophys (object) (Dataset)
|
| 193 |
+
nwb.retinotopy (object) (Dataset)
|
| 194 |
+
experiment-metadata/ (Group)
|
| 195 |
+
0.1.0/ (Group)
|
| 196 |
+
experiment_metadata.extensions (object) (Dataset)
|
| 197 |
+
namespace (object) (Dataset)
|
| 198 |
+
hdmf-common/ (Group)
|
| 199 |
+
1.8.0/ (Group)
|
| 200 |
+
base (object) (Dataset)
|
| 201 |
+
namespace (object) (Dataset)
|
| 202 |
+
sparse (object) (Dataset)
|
| 203 |
+
table (object) (Dataset)
|
| 204 |
+
hdmf-experimental/ (Group)
|
| 205 |
+
0.5.0/ (Group)
|
| 206 |
+
experimental (object) (Dataset)
|
| 207 |
+
namespace (object) (Dataset)
|
| 208 |
+
resources (object) (Dataset)
|
| 209 |
+
stimulus/ (Group)
|
| 210 |
+
presentation/ (Group)
|
| 211 |
+
chirp_stimulus/ (Group)
|
| 212 |
+
data (0, 0, 0) (uint8) (Dataset)
|
| 213 |
+
dimension (2,) (int64) (Dataset)
|
| 214 |
+
external_file (1,) (object) (Dataset)
|
| 215 |
+
format (object) (Dataset)
|
| 216 |
+
starting_time (float64) (Dataset)
|
| 217 |
+
movingbar_stimulus/ (Group)
|
| 218 |
+
data (0, 0, 0) (uint8) (Dataset)
|
| 219 |
+
dimension (2,) (int64) (Dataset)
|
| 220 |
+
external_file (1,) (object) (Dataset)
|
| 221 |
+
format (object) (Dataset)
|
| 222 |
+
starting_time (float64) (Dataset)
|
| 223 |
+
templates/ (Group)
|
| 224 |
+
timestamps_reference_time (object) (Dataset)
|