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#!/bin/bash
# Ensure pigz is installed
if ! command -v pigz &> /dev/null; then
echo "Error: pigz is not installed. Please install it and try again."
exit 1
fi
# Defined the root directory of the whole dataset
ROOT_DIR="../data_test"
# Function to display usage
usage() {
echo "Usage: $0 [--method METHOD --config CONFIG] | [--all]"
exit 1
}
# Function to unzip a single directory
unzip_config() {
local method=$1
local config=$2
local output_path="$ROOT_DIR/$method/$config"
local zipped_file="./data/$method/$config/$config.tar.gz"
echo "Decompressing $zipped_file to $output_path"
# Ensure the output directory exists
mkdir -p "$output_path"
# Create the tar.gz file
echo "Decompressing $zipped_file to $output_path"
tar -xv --use-compress-program=pigz -f "$zipped_file" --directory "$output_path"
if [[ $? -ne 0 ]]; then
echo "Error: Failed to decompress $zipped_file"
exit 1
fi
# Confirm completion
echo "Decompressing $zipped_file sucessfully to $output_path"
}
# Parse arguments
while [[ "$#" -gt 0 ]]; do
case $1 in
--help) usage ;;
--h) usage ;;
--all) ALL="true" ;;
--method) METHOD="$2"; shift ;;
--config) CONFIG="$2"; shift ;;
*) echo "Unknown parameter: $1"; usage ;;
esac
shift
done
# unzipping all folders
if [[ "$ALL" == "true" ]]; then
# Iterate through all methods and configs
for method_dir in ./data/*; do
if [[ -d "$method_dir" && "$(basename "$method_dir")" != "Origin" ]]; then
method=$(basename "$method_dir")
for config_dir in "$method_dir"/config*; do
if [[ -d "$config_dir" ]]; then
config=$(basename "$config_dir")
unzip_config "$method" "$config"
fi
done
fi
done
if [ -e "./data/Origin/Origin.tar.gz" ]; then
# Ensure the output directory exists
mkdir -p "$ROOT_DIR/Origin"
# decompress tar.gz file
echo "Decompressing ./data/Origin/Origin.tar.gz to $ROOT_DIR/Origin"
tar -xv --use-compress-program=pigz -f "./data/Origin/Origin.tar.gz" --directory "$ROOT_DIR/Origin"
if [[ $? -ne 0 ]]; then
echo "Error: Failed to decompress ./data/Origin/Origin.tar.gz"
exit 1
fi
fi
echo "All configurations have been zipped successfully."
exit 0
fi
# Validate arguments
if [[ ! -n "$METHOD" || ! -n "$CONFIG" ]]; then
echo "Error: Both --method and --config or --all must be specified."
usage
fi
unzip_config "$METHOD" "config$CONFIG" |